RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 TFPI2P48307 235 aa11.65□□□□□ -0.54
CIT-210ENST00000539413 UBE2MP61081 183 aaKnown RBP11.65□□□□□ -0.54
CIT-210ENST00000539413 TCF24Q7RTU0 167 aa11.65□□□□□ -0.54
CIT-210ENST00000539413 OR1S2Q8NGQ3 325 aa11.65□□□□□ -0.54
CIT-210ENST00000539413 MUC7Q8TAX7 377 aa11.65□□□□□ -0.54
CIT-210ENST00000539413 NPIPB3Q92617 1050 aa11.65□□□□□ -0.54
CIT-210ENST00000539413 GGTLC1Q9BX51 225 aa11.65□□□□□ -0.54
CIT-210ENST00000539413 CENPXA8MT69 81 aa11.64□□□□□ -0.55
CIT-210ENST00000539413 IAPPP10997 89 aa11.64□□□□□ -0.55
CIT-210ENST00000539413 NPPCP23582 126 aa11.64□□□□□ -0.55
CIT-210ENST00000539413 OR10J1P30954 320 aa11.64□□□□□ -0.55
CIT-210ENST00000539413 GGNBP1Q5YKI7 109 aa11.64□□□□□ -0.55
CIT-210ENST00000539413 ETFRF1Q6IPR1 90 aa11.64□□□□□ -0.55
CIT-210ENST00000539413 GBGT1Q8N5D6 347 aa11.64□□□□□ -0.55
CIT-210ENST00000539413 ACY3Q96HD9 319 aa11.64□□□□□ -0.55
CIT-210ENST00000539413 C7orf50Q9BRJ6 194 aaKnown RBP11.64□□□□□ -0.55
CIT-210ENST00000539413 C3orf84H3BNL1 204 aa11.63□□□□□ -0.55
CIT-210ENST00000539413 PLA2G10O15496 165 aa11.63□□□□□ -0.55
CIT-210ENST00000539413 ADAP1O75689 374 aa11.63□□□□□ -0.55
CIT-210ENST00000539413 DFFBO76075 338 aa11.63□□□□□ -0.55
CIT-210ENST00000539413 IFNA4P05014 189 aa11.63□□□□□ -0.55
CIT-210ENST00000539413 ANXA7P20073 488 aaKnown RBP11.63□□□□□ -0.55
CIT-210ENST00000539413 BMI1P35226 326 aa11.63□□□□□ -0.55
CIT-210ENST00000539413 METTL26Q96S19 204 aa11.63□□□□□ -0.55
CIT-210ENST00000539413 TENM3Q9P273 2699 aa11.63□□□□□ -0.55
CIT-210ENST00000539413 FAM90A26D6RGX4 464 aa11.62□□□□□ -0.55
CIT-210ENST00000539413 OR4E1P0C645 316 aa11.62□□□□□ -0.55
CIT-210ENST00000539413 CRYBB3P26998 211 aa11.62□□□□□ -0.55
CIT-210ENST00000539413 YPEL3P61236 119 aaPredicted RBP11.62□□□□□ -0.55
CIT-210ENST00000539413 DHRS2Q13268 280 aa11.62□□□□□ -0.55
CIT-210ENST00000539413 ZNF124Q15973 351 aa11.62□□□□□ -0.55
CIT-210ENST00000539413 APRG1Q8IVJ8 170 aa11.62□□□□□ -0.55
CIT-210ENST00000539413 Q8WTZ3 238 aa11.62□□□□□ -0.55
CIT-210ENST00000539413 MAGT1Q9H0U3 335 aa11.62□□□□□ -0.55
CIT-210ENST00000539413 MPTX1A8MV57 137 aa11.61□□□□□ -0.55
CIT-210ENST00000539413 CD5P06127 495 aa11.61□□□□□ -0.55
CIT-210ENST00000539413 ATP5IP56385 69 aaPredicted RBP11.61□□□□□ -0.55
CIT-210ENST00000539413 RPL11P62913 178 aaKnown RBP11.61□□□□□ -0.55
CIT-210ENST00000539413 LYG2Q86SG7 212 aa11.61□□□□□ -0.55
CIT-210ENST00000539413 WFDC3Q8IUB2 231 aa11.61□□□□□ -0.55
CIT-210ENST00000539413 MS4A6AQ9H2W1 248 aa11.61□□□□□ -0.55
CIT-210ENST00000539413 TMEM231Q9H6L2 316 aa11.61□□□□□ -0.55
CIT-210ENST00000539413 MAP6D1Q9H9H5 199 aa11.61□□□□□ -0.55
CIT-210ENST00000539413 STAB2Q8WWQ8 2551 aa11.6□□□□□ -0.55
CIT-210ENST00000539413 A0A1W2PS18 150 aa11.6□□□□□ -0.55
CIT-210ENST00000539413 WRBO00258 174 aa11.6□□□□□ -0.55
CIT-210ENST00000539413 LYRM1O43325 122 aa11.6□□□□□ -0.55
CIT-210ENST00000539413 SYNGR2O43760 224 aa11.6□□□□□ -0.55
CIT-210ENST00000539413 MED6O75586 246 aa11.6□□□□□ -0.55
CIT-210ENST00000539413 TOMM40O96008 361 aa11.6□□□□□ -0.55
CIT-210ENST00000539413 GPX4P36969 197 aaPredicted RBP11.6□□□□□ -0.55
CIT-210ENST00000539413 P2RY1P47900 373 aa11.6□□□□□ -0.55
CIT-210ENST00000539413 PAFAH1B2P68402 229 aa11.6□□□□□ -0.55
CIT-210ENST00000539413 GAMTQ14353 236 aa11.6□□□□□ -0.55
CIT-210ENST00000539413 USF2Q15853 346 aaPredicted RBP11.6□□□□□ -0.55
CIT-210ENST00000539413 C4orf46Q504U0 113 aa11.6□□□□□ -0.55
CIT-210ENST00000539413 COQ8AQ8NI60 647 aa11.6□□□□□ -0.55
CIT-210ENST00000539413 PAIP2BQ9ULR5 123 aaKnown RBP11.6□□□□□ -0.55
CIT-210ENST00000539413 KMT2CQ8NEZ4 4911 aaKnown RBP11.6□□□□□ -0.55
CIT-210ENST00000539413 DNASE2O00115 360 aaPredicted RBP11.59□□□□□ -0.55
CIT-210ENST00000539413 IL4P05112 153 aa11.59□□□□□ -0.55
CIT-210ENST00000539413 RD3LP0DJH9 198 aa11.59□□□□□ -0.55
CIT-210ENST00000539413 PSG1P11464 419 aa11.59□□□□□ -0.55
CIT-210ENST00000539413 LYL1P12980 280 aa11.59□□□□□ -0.55
CIT-210ENST00000539413 RPL35AP18077 110 aaKnown RBP11.59□□□□□ -0.55
CIT-210ENST00000539413 CMC4P56277 68 aaPredicted RBP11.59□□□□□ -0.55
CIT-210ENST00000539413 RAB11AP62491 216 aa11.59□□□□□ -0.55
CIT-210ENST00000539413 CNPY1Q3B7I2 92 aa11.59□□□□□ -0.55
CIT-210ENST00000539413 CASC10Q5T4H9 136 aa11.59□□□□□ -0.55
CIT-210ENST00000539413 FAM24BQ8N5W8 94 aa11.59□□□□□ -0.55
CIT-210ENST00000539413 NARS2Q96I59 477 aaKnown RBP11.59□□□□□ -0.55
CIT-210ENST00000539413 SLC35E1Q96K37 410 aa11.59□□□□□ -0.55
CIT-210ENST00000539413 OVOL2Q9BRP0 275 aa11.59□□□□□ -0.55
CIT-210ENST00000539413 C20orf85Q9H1P6 137 aa11.59□□□□□ -0.55
CIT-210ENST00000539413 U3KQE9 123 aa11.59□□□□□ -0.55
CIT-210ENST00000539413 IGKV1D-37A0A075B6S9 117 aa11.58□□□□□ -0.56
CIT-210ENST00000539413 A6NHS1 94 aa11.58□□□□□ -0.56
CIT-210ENST00000539413 HNRNPCP07910 306 aaKnown RBP eCLIP11.58□□□□□ -0.56
CIT-210ENST00000539413 APOC4P55056 127 aa11.58□□□□□ -0.56
CIT-210ENST00000539413 ZFAND6Q6FIF0 208 aa11.58□□□□□ -0.56
CIT-210ENST00000539413 GRAMD2BQ96HH9 432 aa11.58□□□□□ -0.56
CIT-210ENST00000539413 CIB3Q96Q77 187 aaPredicted RBP11.58□□□□□ -0.56
CIT-210ENST00000539413 CCDC32Q9BV29 185 aa11.58□□□□□ -0.56
CIT-210ENST00000539413 RABAC1Q9UI14 185 aa11.58□□□□□ -0.56
CIT-210ENST00000539413 TRAV2A0A0B4J234 112 aa11.57□□□□□ -0.56
CIT-210ENST00000539413 ZFP92A6NM28 416 aa11.57□□□□□ -0.56
CIT-210ENST00000539413 H3BP45 60 aa11.57□□□□□ -0.56
CIT-210ENST00000539413 IFNA21P01568 189 aa11.57□□□□□ -0.56
CIT-210ENST00000539413 POLR2GP62487 172 aaKnown RBP eCLIP11.57□□□□□ -0.56
CIT-210ENST00000539413 ID3Q02535 119 aa11.57□□□□□ -0.56
CIT-210ENST00000539413 ZNF90Q03938 601 aa11.57□□□□□ -0.56
CIT-210ENST00000539413 SPANXN5Q5MJ07 72 aa11.57□□□□□ -0.56
CIT-210ENST00000539413 C16orf54Q6UWD8 224 aa11.57□□□□□ -0.56
CIT-210ENST00000539413 LINC00299Q6ZSB3 139 aa11.57□□□□□ -0.56
CIT-210ENST00000539413 STXBP6Q8NFX7 210 aa11.57□□□□□ -0.56
CIT-210ENST00000539413 OR51G1Q8NGK1 321 aa11.57□□□□□ -0.56
CIT-210ENST00000539413 OR4D5Q8NGN0 318 aa11.57□□□□□ -0.56
CIT-210ENST00000539413 DNAH7Q8WXX0 4024 aa11.57□□□□□ -0.56
CIT-210ENST00000539413 TRAV6A0A075B6T7 132 aa11.56□□□□□ -0.56
CIT-210ENST00000539413 KIR2DL5BA0A0G2JN68 375 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms