RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 TRAV3A0A0B4J244 114 aa0.79□□□□□ -2.28
CCDC7-209ENST00000539197 IGKV1-9A0A0C4DH69 117 aa0.79□□□□□ -2.28
CCDC7-209ENST00000539197 F8W036 122 aa0.79□□□□□ -2.28
CCDC7-209ENST00000539197 OR2B3O76000 313 aa0.79□□□□□ -2.28
CCDC7-209ENST00000539197 TCL1BO95988 128 aa0.79□□□□□ -2.28
CCDC7-209ENST00000539197 OR4E1P0C645 316 aa0.79□□□□□ -2.28
CCDC7-209ENST00000539197 MGST1P10620 155 aaKnown RBP0.79□□□□□ -2.28
CCDC7-209ENST00000539197 ATP5G3P48201 142 aa0.79□□□□□ -2.28
CCDC7-209ENST00000539197 YPEL3P61236 119 aaPredicted RBP0.79□□□□□ -2.28
CCDC7-209ENST00000539197 RHOBP62745 196 aa0.79□□□□□ -2.28
CCDC7-209ENST00000539197 SURF2Q15527 256 aaPredicted RBP0.79□□□□□ -2.28
CCDC7-209ENST00000539197 RNASE10Q5GAN6 216 aaKnown RBP0.79□□□□□ -2.28
CCDC7-209ENST00000539197 GOLT1AQ6ZVE7 132 aa0.79□□□□□ -2.28
CCDC7-209ENST00000539197 DEFB128Q7Z7B8 93 aa0.79□□□□□ -2.28
CCDC7-209ENST00000539197 OR13D1Q8NGV5 346 aa0.79□□□□□ -2.28
CCDC7-209ENST00000539197 SERPINI1Q99574 410 aa0.79□□□□□ -2.28
CCDC7-209ENST00000539197 ADAT1Q9BUB4 502 aaKnown RBP0.79□□□□□ -2.28
CCDC7-209ENST00000539197 REG4Q9BYZ8 158 aa0.79□□□□□ -2.28
CCDC7-209ENST00000539197 TMEM133Q9H2Q1 129 aa0.79□□□□□ -2.28
CCDC7-209ENST00000539197 ARMC1Q9NVT9 282 aa0.79□□□□□ -2.28
CCDC7-209ENST00000539197 UTP11Q9Y3A2 253 aaKnown RBP0.79□□□□□ -2.28
CCDC7-209ENST00000539197 ARL5AQ9Y689 179 aa0.79□□□□□ -2.28
CCDC7-209ENST00000539197 RALGAPA2Q2PPJ7 1873 aa0.79□□□□□ -2.28
CCDC7-209ENST00000539197 NCOA1Q15788 1441 aa0.79□□□□□ -2.28
CCDC7-209ENST00000539197 PCF11O94913 1555 aaKnown RBP0.79□□□□□ -2.28
CCDC7-209ENST00000539197 SMARCA4P51532 1647 aa0.78□□□□□ -2.28
CCDC7-209ENST00000539197 A0A087X0T9 212 aa0.78□□□□□ -2.28
CCDC7-209ENST00000539197 TRAV4A0A0B4J268 109 aa0.78□□□□□ -2.28
CCDC7-209ENST00000539197 C2orf70A6NJV1 201 aa0.78□□□□□ -2.28
CCDC7-209ENST00000539197 HMGB3O15347 200 aaKnown RBP0.78□□□□□ -2.28
CCDC7-209ENST00000539197 CYB5BO43169 146 aa0.78□□□□□ -2.28
CCDC7-209ENST00000539197 OR2T1O43869 369 aa0.78□□□□□ -2.28
CCDC7-209ENST00000539197 MRPS14O60783 128 aaKnown RBP0.78□□□□□ -2.28
CCDC7-209ENST00000539197 COX6A1P12074 109 aa0.78□□□□□ -2.28
CCDC7-209ENST00000539197 SSR2P43308 183 aa0.78□□□□□ -2.28
CCDC7-209ENST00000539197 PIGPP57054 158 aa0.78□□□□□ -2.28
CCDC7-209ENST00000539197 HSPE1P61604 102 aaKnown RBP0.78□□□□□ -2.28
CCDC7-209ENST00000539197 ARF6P62330 175 aa0.78□□□□□ -2.28
CCDC7-209ENST00000539197 C10orf55Q5SWW7 151 aa0.78□□□□□ -2.28
CCDC7-209ENST00000539197 DHRS4L2Q6PKH6 230 aa0.78□□□□□ -2.28
CCDC7-209ENST00000539197 RPS19BP1Q86WX3 136 aaKnown RBP0.78□□□□□ -2.28
CCDC7-209ENST00000539197 LINC00311Q8N616 119 aa0.78□□□□□ -2.28
CCDC7-209ENST00000539197 PXT1Q8NFP0 134 aa0.78□□□□□ -2.28
CCDC7-209ENST00000539197 OR4D11Q8NGI4 311 aa0.78□□□□□ -2.28
CCDC7-209ENST00000539197 GPR146Q96CH1 333 aa0.78□□□□□ -2.28
CCDC7-209ENST00000539197 HIST1H2BLQ99880 126 aa0.78□□□□□ -2.28
CCDC7-209ENST00000539197 CCDC94Q9BW85 323 aaPredicted RBP0.78□□□□□ -2.28
CCDC7-209ENST00000539197 MED29Q9NX70 200 aa0.78□□□□□ -2.28
CCDC7-209ENST00000539197 TAS2R4Q9NYW5 299 aa0.78□□□□□ -2.28
CCDC7-209ENST00000539197 EPDR1Q9UM22 224 aa0.78□□□□□ -2.28
CCDC7-209ENST00000539197 RTL1A6NKG5 1358 aa0.78□□□□□ -2.28
CCDC7-209ENST00000539197 RIC1Q4ADV7 1423 aa0.78□□□□□ -2.28
CCDC7-209ENST00000539197 GLI3P10071 1580 aa0.78□□□□□ -2.29
CCDC7-209ENST00000539197 GPR98Q8WXG9 6306 aa0.77□□□□□ -2.29
CCDC7-209ENST00000539197 TRBV19A0A075B6N1 114 aa0.77□□□□□ -2.29
CCDC7-209ENST00000539197 C19orf84I3L1E1 186 aa0.77□□□□□ -2.29
CCDC7-209ENST00000539197 J3QRK9 145 aa0.77□□□□□ -2.29
CCDC7-209ENST00000539197 UBL3O95164 117 aa0.77□□□□□ -2.29
CCDC7-209ENST00000539197 C1QBP02746 253 aa0.77□□□□□ -2.29
CCDC7-209ENST00000539197 RNASE3P12724 160 aaKnown RBP0.77□□□□□ -2.29
CCDC7-209ENST00000539197 TSNQ15631 228 aaKnown RBP0.77□□□□□ -2.29
CCDC7-209ENST00000539197 SPANXN5Q5MJ07 72 aa0.77□□□□□ -2.29
CCDC7-209ENST00000539197 LYRM7Q5U5X0 104 aa0.77□□□□□ -2.29
CCDC7-209ENST00000539197 UNQ6190/PRO20217Q6UXQ8 127 aa0.77□□□□□ -2.29
CCDC7-209ENST00000539197 EXOC3-AS1Q8N2X6 119 aa0.77□□□□□ -2.29
CCDC7-209ENST00000539197 C3orf56Q8N813 242 aa0.77□□□□□ -2.29
CCDC7-209ENST00000539197 FAM172AQ8WUF8 416 aa0.77□□□□□ -2.29
CCDC7-209ENST00000539197 MIXL1Q9H2W2 232 aa0.77□□□□□ -2.29
CCDC7-209ENST00000539197 RNF122Q9H9V4 155 aa0.77□□□□□ -2.29
CCDC7-209ENST00000539197 OR5AC2Q9NZP5 309 aa0.77□□□□□ -2.29
CCDC7-209ENST00000539197 CPAMD8Q8IZJ3 1885 aa0.77□□□□□ -2.29
CCDC7-209ENST00000539197 MICAL3Q7RTP6 2002 aa0.77□□□□□ -2.29
CCDC7-209ENST00000539197 FREM1Q5H8C1 2179 aa0.77□□□□□ -2.29
CCDC7-209ENST00000539197 NUMA1Q14980 2115 aa0.76□□□□□ -2.29
CCDC7-209ENST00000539197 MAST2Q6P0Q8 1798 aa0.76□□□□□ -2.29
CCDC7-209ENST00000539197 FUOMA2VDF0 154 aa0.76□□□□□ -2.29
CCDC7-209ENST00000539197 CST8O60676 142 aa0.76□□□□□ -2.29
CCDC7-209ENST00000539197 MIFP14174 115 aa0.76□□□□□ -2.29
CCDC7-209ENST00000539197 RNASE4P34096 147 aaKnown RBP0.76□□□□□ -2.29
CCDC7-209ENST00000539197 SRP14P37108 136 aaKnown RBP0.76□□□□□ -2.29
CCDC7-209ENST00000539197 PPP1R2P41236 205 aa0.76□□□□□ -2.29
CCDC7-209ENST00000539197 NCALDP61601 193 aa0.76□□□□□ -2.29
CCDC7-209ENST00000539197 DYNLT1P63172 113 aa0.76□□□□□ -2.29
CCDC7-209ENST00000539197 GNG5P63218 68 aa0.76□□□□□ -2.29
CCDC7-209ENST00000539197 EIF5AP63241 154 aaKnown RBP0.76□□□□□ -2.29
CCDC7-209ENST00000539197 KRR1Q13601 381 aaKnown RBP0.76□□□□□ -2.29
CCDC7-209ENST00000539197 ESRGQ1W209 222 aa0.76□□□□□ -2.29
CCDC7-209ENST00000539197 RRN3P1Q2M238 152 aa0.76□□□□□ -2.29
CCDC7-209ENST00000539197 DEFB113Q30KQ7 82 aa0.76□□□□□ -2.29
CCDC7-209ENST00000539197 BRMS1LQ5PSV4 323 aa0.76□□□□□ -2.29
CCDC7-209ENST00000539197 PPP1R2P3Q6NXS1 205 aa0.76□□□□□ -2.29
CCDC7-209ENST00000539197 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.76□□□□□ -2.29
CCDC7-209ENST00000539197 PHF13Q86YI8 300 aaPredicted RBP0.76□□□□□ -2.29
CCDC7-209ENST00000539197 OR10J5Q8NHC4 309 aa0.76□□□□□ -2.29
CCDC7-209ENST00000539197 AP3S1Q92572 193 aa0.76□□□□□ -2.29
CCDC7-209ENST00000539197 SLAMF6Q96DU3 332 aa0.76□□□□□ -2.29
CCDC7-209ENST00000539197 PRADC1Q9BSG0 188 aa0.76□□□□□ -2.29
CCDC7-209ENST00000539197 BCL2L10Q9HD36 194 aa0.76□□□□□ -2.29
CCDC7-209ENST00000539197 SS18L2Q9UHA2 77 aa0.76□□□□□ -2.29
CCDC7-209ENST00000539197 BAZ2BQ9UIF8 2168 aaKnown RBP0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms