RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 OR2T4Q8NH00 348 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 PLEKHB2Q96CS7 222 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 HIGD2AQ9BW72 106 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 SH3BGRL3Q9H299 93 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 LINC00588Q9Y4M8 146 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 VCANP13611 3396 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 MICAL3Q7RTP6 2002 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 CLTCQ00610 1675 aaKnown RBP0.53□□□□□ -2.32
HIF1A-204ENST00000539097 HTTP42858 3142 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 CR1P17927 2039 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 CACNA1BQ00975 2339 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 MEGF8Q7Z7M0 2845 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 WDFY3Q8IZQ1 3526 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 IGKV1OR2-108A0A075B7D4 117 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 LOC100130705A0A1B0GUX0 176 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 ARRDC5A6NEK1 342 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 M0QZK8 103 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 OR7C1O76099 320 aaPredicted RBP0.53□□□□□ -2.32
HIF1A-204ENST00000539097 CDRT1O95170 752 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 LGALS1P09382 135 aaKnown RBP0.53□□□□□ -2.32
HIF1A-204ENST00000539097 SULT1A3P0DMM9 295 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 SULT1A4P0DMN0 295 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 IMPA1P29218 277 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 CASP1P29466 404 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 HLA-DRB3P79483 266 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 TRAM1Q15629 374 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 CCDC153Q494R4 210 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 DGCR14Q96DF8 476 aaKnown RBP0.53□□□□□ -2.32
HIF1A-204ENST00000539097 DERL3Q96Q80 235 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 TMEM208Q9BTX3 173 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 TMEM70Q9BUB7 260 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 MRPS26Q9BYN8 205 aaKnown RBP0.53□□□□□ -2.32
HIF1A-204ENST00000539097 GTSF1LQ9H1H1 148 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 TRABDQ9H4I3 376 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 KCNIP2Q9NS61 270 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 C21orf62Q9NYP8 219 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 VPS29Q9UBQ0 182 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 DNAH14Q0VDD8 3507 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 SIP14410 1827 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 TNRC6BQ9UPQ9 1833 aaKnown RBP0.53□□□□□ -2.32
HIF1A-204ENST00000539097 TECPR2O15040 1411 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 CCDC18Q5T9S5 1454 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 RTTNQ86VV8 2226 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 OR4C45A6NMZ5 311 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 SYNGR2O43760 224 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 TRGV3P03979 118 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 CD79AP11912 226 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF14P17017 642 aaPredicted RBP0.53□□□□□ -2.32
HIF1A-204ENST00000539097 DAPP51397 102 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 TAS2R41P59536 307 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 TAS2R20P59543 309 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 RHOBP62745 196 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 AKR1C1Q04828 323 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 PLCXD2Q0VAA5 305 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 IBA57Q5T440 356 aaKnown RBP0.53□□□□□ -2.32
HIF1A-204ENST00000539097 HBMQ6B0K9 141 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 LAIR2Q6ISS4 152 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 LCN8Q6JVE9 175 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF773Q6PK81 442 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 TMEM14EPQ6UXP3 125 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 STX12Q86Y82 276 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 AMN1Q8IY45 258 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 TMEM256Q8N2U0 113 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 CCDC112Q8NEF3 446 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 OR10P1Q8NGE3 313 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 SGMS2Q8NHU3 365 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 ITLN2Q8WWU7 325 aaPredicted RBP0.53□□□□□ -2.32
HIF1A-204ENST00000539097 RERGQ96A58 199 aaPredicted RBP0.53□□□□□ -2.32
HIF1A-204ENST00000539097 MRAP2Q96G30 205 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 SMIM8Q96KF7 97 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 COPS4Q9BT78 406 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 MRPL40Q9NQ50 206 aaKnown RBP0.53□□□□□ -2.32
HIF1A-204ENST00000539097 LINC00527Q9UJ94 153 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 EIF2AK4Q9P2K8 1649 aaKnown RBP0.53□□□□□ -2.32
HIF1A-204ENST00000539097 EEA1Q15075 1411 aa0.53□□□□□ -2.32
HIF1A-204ENST00000539097 MYH4Q9Y623 1939 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 IGKV1-9A0A0C4DH69 117 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 MUC21A0A0G2JKD1 596 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 MUC21A0A140T8X8 626 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 A0A1W2PNU3 283 aaPredicted RBP0.53□□□□□ -2.33
HIF1A-204ENST00000539097 C5orf49A4QMS7 147 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 A8MUN3 132 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 A8MWP4 228 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 RPL36A-HNRNPH2H7BZ11 118 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 IFNA10P01566 189 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 IFNA21P01568 189 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 ZNF286BP0CG31 522 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 CCL4P13236 92 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 HLA-EP13747 358 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 ZNF32P17041 273 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 CXCL3P19876 107 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 RPS4Y1P22090 263 aaKnown RBP0.53□□□□□ -2.33
HIF1A-204ENST00000539097 EMX2Q04743 252 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 C12orf74Q32Q52 190 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 SMIM21Q3B7S5 101 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 CCDC58Q4VC31 144 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 DNLZQ5SXM8 178 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 AMMECR1LQ6DCA0 310 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 KRTAP26-1Q6PEX3 210 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 PDPNQ86YL7 162 aa0.53□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms