RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 UTF1Q5T230 341 aa15.09■□□□□ 0.01
SFSWAP-207ENST00000538548 RPP21Q9H633 154 aaKnown RBP15.09■□□□□ 0.01
SFSWAP-207ENST00000538548 ABI3Q9P2A4 366 aa15.09■□□□□ 0.01
SFSWAP-207ENST00000538548 NBEAQ8NFP9 2946 aa15.08■□□□□ 0.01
SFSWAP-207ENST00000538548 C7orf71A4D174 169 aa15.08■□□□□ 0
SFSWAP-207ENST00000538548 CT83Q5H943 113 aa15.08■□□□□ 0
SFSWAP-207ENST00000538548 CACNG8Q8WXS5 425 aa15.08■□□□□ 0
SFSWAP-207ENST00000538548 A8MWL6 223 aa15.08■□□□□ 0
SFSWAP-207ENST00000538548 COX7A2P2O60397 106 aa15.08■□□□□ 0
SFSWAP-207ENST00000538548 LYZL6O75951 148 aa15.08■□□□□ 0
SFSWAP-207ENST00000538548 RNFT1Q5M7Z0 435 aa15.08■□□□□ 0
SFSWAP-207ENST00000538548 VHLLQ6RSH7 139 aa15.08■□□□□ 0
SFSWAP-207ENST00000538548 HSPB8Q9UJY1 196 aa15.08■□□□□ 0
SFSWAP-207ENST00000538548 PTPRZ1P23471 2315 aaPredicted RBP15.08■□□□□ 0
SFSWAP-207ENST00000538548 TEX50A0A1B0GTY4 177 aa15.07■□□□□ 0
SFSWAP-207ENST00000538548 SEC11AP67812 179 aa15.07■□□□□ 0
SFSWAP-207ENST00000538548 PMCHL2Q9BQD1 86 aa15.07■□□□□ 0
SFSWAP-207ENST00000538548 OTOGLQ3ZCN5 2332 aa15.07■□□□□ 0
SFSWAP-207ENST00000538548 LOC102724200A0A096LPH7 203 aaPredicted RBP15.07■□□□□ 0
SFSWAP-207ENST00000538548 C10orf113Q5VZT2 155 aa15.07■□□□□ 0
SFSWAP-207ENST00000538548 OR1L4Q8NGR5 311 aa15.07■□□□□ 0
SFSWAP-207ENST00000538548 NDFIP1Q9BT67 221 aa15.07■□□□□ 0
SFSWAP-207ENST00000538548 PRSS22Q9GZN4 317 aa15.07■□□□□ 0
SFSWAP-207ENST00000538548 GAGE10A6NGK3 116 aa15.06■□□□□ 0
SFSWAP-207ENST00000538548 SRRM5B3KS81 715 aa15.06■□□□□ 0
SFSWAP-207ENST00000538548 COX8AP10176 69 aa15.06■□□□□ 0
SFSWAP-207ENST00000538548 CD24P25063 80 aa15.06■□□□□ 0
SFSWAP-207ENST00000538548 MYCNOSP40205 109 aa15.06■□□□□ 0
SFSWAP-207ENST00000538548 SARAFQ96BY9 339 aa15.06■□□□□ 0
SFSWAP-207ENST00000538548 FXYD5Q96DB9 178 aa15.06■□□□□ 0
SFSWAP-207ENST00000538548 GPR82Q96P67 336 aa15.06■□□□□ 0
SFSWAP-207ENST00000538548 FZR1Q9UM11 496 aa15.06■□□□□ 0
SFSWAP-207ENST00000538548 DCHS1Q96JQ0 3298 aa15.06■□□□□ 0
SFSWAP-207ENST00000538548 CGB3P0DN86 165 aa15.06■□□□□ 0
SFSWAP-207ENST00000538548 CGB7P0DN87 165 aa15.06■□□□□ 0
SFSWAP-207ENST00000538548 FABP6P51161 128 aa15.06■□□□□ 0
SFSWAP-207ENST00000538548 GNG5P63218 68 aa15.06■□□□□ 0
SFSWAP-207ENST00000538548 LINC01545Q5VT33 79 aa15.06■□□□□ 0
SFSWAP-207ENST00000538548 GTSF1Q8WW33 167 aa15.06■□□□□ 0
SFSWAP-207ENST00000538548 KLF12Q9Y4X4 402 aa15.06■□□□□ 0
SFSWAP-207ENST00000538548 MEOX1P50221 254 aa15.05■□□□□ 0
SFSWAP-207ENST00000538548 C2orf91Q6ZV80 131 aa15.05■□□□□ 0
SFSWAP-207ENST00000538548 ZNRF1Q8ND25 227 aa15.05■□□□□ 0
SFSWAP-207ENST00000538548 MLST8Q9BVC4 326 aa15.05■□□□□ 0
SFSWAP-207ENST00000538548 RAB9BQ9NP90 201 aa15.05■□□□□ 0
SFSWAP-207ENST00000538548 EPDR1Q9UM22 224 aa15.05■□□□□ 0
SFSWAP-207ENST00000538548 KLF13Q9Y2Y9 288 aaPredicted RBP15.05■□□□□ 0
SFSWAP-207ENST00000538548 SPENQ96T58 3664 aaKnown RBP15.05■□□□□ 0
SFSWAP-207ENST00000538548 SAP30O75446 220 aa15.05■□□□□ -0
SFSWAP-207ENST00000538548 MZT1Q08AG7 82 aa15.05■□□□□ -0
SFSWAP-207ENST00000538548 C17orf58Q2M2W7 97 aa15.05■□□□□ -0
SFSWAP-207ENST00000538548 UFSP1Q6NVU6 142 aa15.05■□□□□ -0
SFSWAP-207ENST00000538548 LINC00696Q6ZRV3 163 aa15.05■□□□□ -0
SFSWAP-207ENST00000538548 BPIFA4PQ86YQ2 179 aa15.05■□□□□ -0
SFSWAP-207ENST00000538548 DLL1O00548 723 aa15.04■□□□□ -0
SFSWAP-207ENST00000538548 IGKV3-15P01624 115 aa15.04■□□□□ -0
SFSWAP-207ENST00000538548 GTF2H5Q6ZYL4 71 aa15.04■□□□□ -0
SFSWAP-207ENST00000538548 GCSAMQ8N6F7 178 aa15.04■□□□□ -0
SFSWAP-207ENST00000538548 FER1L6-AS1Q8NA97 138 aa15.04■□□□□ -0
SFSWAP-207ENST00000538548 PGLYRP4Q96LB8 373 aa15.04■□□□□ -0
SFSWAP-207ENST00000538548 GFRA4Q9GZZ7 299 aa15.04■□□□□ -0
SFSWAP-207ENST00000538548 PCNX2A6NKB5 2137 aa15.04■□□□□ -0
SFSWAP-207ENST00000538548 P01737 135 aa15.04■□□□□ -0
SFSWAP-207ENST00000538548 PATE2Q6UY27 113 aa15.04■□□□□ -0
SFSWAP-207ENST00000538548 RBPMS2Q6ZRY4 209 aaKnown RBP15.04■□□□□ -0
SFSWAP-207ENST00000538548 MCRIP2Q9BUT9 160 aaKnown RBP15.04■□□□□ -0
SFSWAP-207ENST00000538548 CHTOPQ9Y3Y2 248 aaKnown RBP15.04■□□□□ -0
SFSWAP-207ENST00000538548 ZNF292O60281 2723 aa15.04■□□□□ -0
SFSWAP-207ENST00000538548 HTR1DP28221 377 aa15.03■□□□□ -0
SFSWAP-207ENST00000538548 ARF6P62330 175 aa15.03■□□□□ -0
SFSWAP-207ENST00000538548 TMEM97Q5BJF2 176 aa15.03■□□□□ -0
SFSWAP-207ENST00000538548 ZNF492Q9P255 531 aa15.03■□□□□ -0
SFSWAP-207ENST00000538548 FAM231BA6NCW3 169 aa15.03■□□□□ -0
SFSWAP-207ENST00000538548 SRRM4A7MD48 611 aaKnown RBP15.03■□□□□ -0
SFSWAP-207ENST00000538548 H0Y8G0 127 aa15.03■□□□□ -0
SFSWAP-207ENST00000538548 SLC25A5P05141 298 aaKnown RBP15.03■□□□□ -0
SFSWAP-207ENST00000538548 LINC00322Q6ZN03 302 aaPredicted RBP15.03■□□□□ -0
SFSWAP-207ENST00000538548 PDPNQ86YL7 162 aa15.03■□□□□ -0
SFSWAP-207ENST00000538548 OR10W1Q8NGF6 305 aa15.03■□□□□ -0
SFSWAP-207ENST00000538548 KBTBD11-OT1A0A1B0GTJ5 212 aa15.02■□□□□ -0
SFSWAP-207ENST00000538548 CHEK1O14757 476 aa15.02■□□□□ -0
SFSWAP-207ENST00000538548 FSTL3O95633 263 aa15.02■□□□□ -0
SFSWAP-207ENST00000538548 IGKV1-16P04430 117 aa15.02■□□□□ -0
SFSWAP-207ENST00000538548 NBEAP1P0C6P0 100 aa15.02■□□□□ -0
SFSWAP-207ENST00000538548 RIPPLY3P57055 190 aa15.02■□□□□ -0
SFSWAP-207ENST00000538548 MUC6Q6W4X9 2439 aa15.02■□□□□ -0
SFSWAP-207ENST00000538548 IGHV3OR15-7A0A075B7D8 119 aa15.02□□□□□ -0.01
SFSWAP-207ENST00000538548 C19orf71A6NCJ1 209 aa15.02□□□□□ -0.01
SFSWAP-207ENST00000538548 PPIAL4DF5H284 164 aa15.02□□□□□ -0.01
SFSWAP-207ENST00000538548 MOSP00540 346 aa15.02□□□□□ -0.01
SFSWAP-207ENST00000538548 ZNF137PP52743 207 aa15.02□□□□□ -0.01
SFSWAP-207ENST00000538548 SGK494Q96LW2 274 aa15.02□□□□□ -0.01
SFSWAP-207ENST00000538548 DEFB127Q9H1M4 99 aa15.02□□□□□ -0.01
SFSWAP-207ENST00000538548 ZNF430Q9H8G1 570 aaPredicted RBP15.02□□□□□ -0.01
SFSWAP-207ENST00000538548 AGFG2O95081 481 aa15.01□□□□□ -0.01
SFSWAP-207ENST00000538548 APOA2P02652 100 aa15.01□□□□□ -0.01
SFSWAP-207ENST00000538548 SSBP2P81877 361 aaPredicted RBP15.01□□□□□ -0.01
SFSWAP-207ENST00000538548 TMEM177Q53S58 311 aa15.01□□□□□ -0.01
SFSWAP-207ENST00000538548 OR1B1Q8NGR6 318 aa15.01□□□□□ -0.01
SFSWAP-207ENST00000538548 G3V4G9 280 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms