RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 VSIG4Q9Y279 399 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 NOTCH2Q04721 2471 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 CACNA1DQ01668 2161 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 SAA2-SAA4A0A096LPE2 208 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 A0A1W2PP11 408 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 GAGE12BA1L429 117 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 B5MCH6 92 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 F5H768 121 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 H0YJW9 148 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 FCGR3BO75015 233 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 KBTBD11O94819 623 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 TSPAN15O95858 294 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 RLN1P04808 185 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 IL5P05113 134 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 SCTP09683 121 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 SAA2P0DJI9 122 aaPredicted RBP2.87□□□□□ -1.95
PTPN22-211ENST00000538253 ESDP10768 282 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 SLC25A4P12235 298 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 PMCHP20382 165 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 DUTP33316 252 aaKnown RBP2.87□□□□□ -1.95
PTPN22-211ENST00000538253 HRH1P35367 487 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 EIF5AP63241 154 aaKnown RBP2.87□□□□□ -1.95
PTPN22-211ENST00000538253 VAMP3Q15836 100 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 UNQ5815/PRO19632Q6UWF5 114 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 PPP1R27Q86WC6 154 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 NIT1Q86X76 327 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 CIARTQ8N365 385 aaPredicted RBP2.87□□□□□ -1.95
PTPN22-211ENST00000538253 TPRX1Q8N7U7 411 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 MAPK1IP1LQ8NDC0 245 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 GRAMD2BQ96HH9 432 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 RAB40CQ96S21 281 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 ARL6Q9H0F7 186 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 IL36RNQ9UBH0 155 aa2.87□□□□□ -1.95
PTPN22-211ENST00000538253 UBR5O95071 2799 aaPredicted RBP2.86□□□□□ -1.95
PTPN22-211ENST00000538253 IGHV3-43A0A0B4J1X8 118 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 TRAV41A0A0B4J266 112 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 TCRBV4S1A1TA0A5B7 111 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 TMEM213A2RRL7 107 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 SNRPGP15A8MWD9 76 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 OR9G9P0C7N8 305 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 IGHV3-43DP0DP04 118 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 LPAR6P43657 344 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 EFNB2P52799 333 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 DLK1P80370 383 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 PRSS8Q16651 343 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 KLF17Q5JT82 389 aaPredicted RBP2.86□□□□□ -1.95
PTPN22-211ENST00000538253 SPSB3Q6PJ21 355 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 BRD3OSQ6XYD6 125 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 OCC1Q8TAD7 63 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 FAM110DQ8TAY7 271 aaPredicted RBP2.86□□□□□ -1.95
PTPN22-211ENST00000538253 EEF1AKMT3Q96AZ1 226 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 GINS3Q9BRX5 216 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 C20orf24Q9BUV8 137 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 C19orf24Q9BVV8 132 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 MRPL20Q9BYC9 149 aaKnown RBP2.86□□□□□ -1.95
PTPN22-211ENST00000538253 LAMA2P24043 3122 aaKnown RBP2.86□□□□□ -1.95
PTPN22-211ENST00000538253 TRIOO75962 3097 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 A0A0A6YYD4 124 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 C3orf85A0A1B0GTC6 90 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 A0A1W2PPI3 338 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 INS-IGF2F8WCM5 200 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 K7EN84 100 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 RS1O15537 224 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 IGF1P05019 195 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 OR5AC1P0C628 307 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 DEFA4P12838 97 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 MYOD1P15172 320 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 HSPE1P61604 102 aaKnown RBP2.86□□□□□ -1.95
PTPN22-211ENST00000538253 KLRD1Q13241 179 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 INSL4Q14641 139 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 FXYD3Q14802 87 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 PSG5Q15238 335 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 IQCJQ1A5X6 159 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 FAM106AQ4KMX7 169 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 PRR31Q5SQ13 230 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 VN1R17PQ8TDU5 208 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 RNF183Q96D59 192 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 OR10C1Q96KK4 312 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 RCHY1Q96PM5 261 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 MALRD1Q5VYJ5 2156 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 ROS1P08922 2347 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 AKAP6Q13023 2319 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 A0A0U1RRA0 63 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 A0A1W2PS18 150 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 NPIPB5A8MRT5 1133 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 ZNF561-AS1K7EIQ3 104 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 UPK2O00526 184 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 IGHV4-59P01825 116 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 CRYGBP07316 175 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 PIGPP57054 158 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 ATP5G2Q06055 141 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 OR2F1Q13607 317 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 LY6EQ16553 131 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 ZNF429Q86V71 674 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 OR10G9Q8NGN4 311 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 SOSTQ9BQB4 213 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 HSPB8Q9UJY1 196 aa2.86□□□□□ -1.95
PTPN22-211ENST00000538253 A0A087WX48 190 aa2.85□□□□□ -1.95
PTPN22-211ENST00000538253 TRBV7-1A0A0A6YYK4 115 aa2.85□□□□□ -1.95
PTPN22-211ENST00000538253 C7orf77A4D0Y5 90 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms