RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 DNLZQ5SXM8 178 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 FAM89BQ8N5H3 189 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 FER1L6-AS1Q8NA97 138 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 UBE2E2Q96LR5 201 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 C2orf88Q9BSF0 95 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 ALKBH7Q9BT30 221 aaPredicted RBP4.39□□□□□ -1.71
LRP6-203ENST00000538239 DPH3P1Q9H4G8 78 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 TRAV5A0A0B4J249 113 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 IGHV1-69DA0A0B4J2H0 117 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 OOSP1A8MZH6 123 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 IGHV1-69P01742 117 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 TRGC2P03986 189 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 GATA3P23771 443 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 ARTNQ5T4W7 220 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 TMEM42Q69YG0 159 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 OR9G4Q8NGQ1 327 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 COQ2Q96H96 371 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 C18orf15Q96N68 181 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 HSPB9Q9BQS6 159 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 REG4Q9BYZ8 158 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 FAM215AQ9Y5M1 114 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 IGKV2-40A0A087WW87 121 aaPredicted RBP4.39□□□□□ -1.71
LRP6-203ENST00000538239 TRBV7-1A0A0A6YYK4 115 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 J3QR89 54 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 IGKV2D-40P01614 121 aaPredicted RBP4.39□□□□□ -1.71
LRP6-203ENST00000538239 CRPP02741 224 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 ZNF688P0C7X2 276 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 GTF2H5Q6ZYL4 71 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 IGHV2-70DA0A0C4DH43 119 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 SYNJ2BPP57105 145 aa4.39□□□□□ -1.71
LRP6-203ENST00000538239 LINC00862A6NCI5 91 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 IGHV3-53P01767 116 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 MT-ND6P03923 174 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 CIRBPQ14011 172 aaKnown RBP4.38□□□□□ -1.71
LRP6-203ENST00000538239 C11orf91Q3C1V1 193 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 RNF166Q96A37 237 aaPredicted RBP4.38□□□□□ -1.71
LRP6-203ENST00000538239 TRAF4Q9BUZ4 470 aaPredicted RBP4.38□□□□□ -1.71
LRP6-203ENST00000538239 RPP21Q9H633 154 aaKnown RBP4.38□□□□□ -1.71
LRP6-203ENST00000538239 LEPROTL1O95214 131 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 OR10J3Q5JRS4 329 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 DUX4L9Q6RFH8 374 aaPredicted RBP4.38□□□□□ -1.71
LRP6-203ENST00000538239 ASCL4Q6XD76 172 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 KCNS1Q96KK3 526 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 PRELID3AQ96N28 172 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 VPS25Q9BRG1 176 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 MYO7BQ6PIF6 2116 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 TAS2R60P59551 318 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 TMEM170BQ5T4T1 132 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 BIVMQ86UB2 503 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 TMEM160Q9NX00 188 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 F11RQ9Y624 299 aaKnown RBP4.38□□□□□ -1.71
LRP6-203ENST00000538239 C2orf16Q68DN1 1984 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 TRAV21A0A0B4J279 112 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 TCF21O43680 179 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 FCN3O75636 299 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 CNTFRP26992 372 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 FOXA3P55318 350 aaPredicted RBP4.38□□□□□ -1.71
LRP6-203ENST00000538239 CFAP161Q6P656 301 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 BEND2Q8NDZ0 799 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 OR1P1Q8NH06 330 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 SDHCQ99643 169 aaPredicted RBP4.38□□□□□ -1.71
LRP6-203ENST00000538239 TMEM70Q9BUB7 260 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 PEF1Q9UBV8 284 aaKnown RBP4.38□□□□□ -1.71
LRP6-203ENST00000538239 TRGV11A0A075B6L2 103 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 FAM223BA6NKX1 122 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 OR11H12B2RN74 326 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 CMC4P56277 68 aaPredicted RBP4.38□□□□□ -1.71
LRP6-203ENST00000538239 FAM223AQ8IWN6 122 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 ZNF383Q8NA42 475 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 SCRT1Q9BWW7 348 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 FREM3P0C091 2139 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 ZNF503-AS2A6NEH8 195 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 HOXA3O43365 443 aaPredicted RBP4.38□□□□□ -1.71
LRP6-203ENST00000538239 PRTN3P24158 256 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 PLA2G5P39877 138 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 UBE2E1P51965 193 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 IGFL4Q6B9Z1 124 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 LRTM2Q8N967 370 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 OR10AG1Q8NH19 301 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 NRGNQ92686 78 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 MRAP2Q96G30 205 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 SIGLEC9Q9Y336 463 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 ARID1AO14497 2285 aa4.38□□□□□ -1.71
LRP6-203ENST00000538239 FABP5P3A8MUU1 101 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 M0R143 59 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 NMBP08949 121 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 DEFB104AQ8WTQ1 72 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 OVOL1O14753 267 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 PSG1P11464 419 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 RCHY1Q96PM5 261 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 KIF26BQ2KJY2 2108 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 TRAV12-3A0A0B4J271 114 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 LINC00473A8K010 186 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 CBLN1P23435 193 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 SRSF4Q08170 494 aaKnown RBP4.37□□□□□ -1.71
LRP6-203ENST00000538239 USMG5Q96IX5 58 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 FBLN5Q9UBX5 448 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 CLDN16Q9Y5I7 305 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 FAM90A9PA6NNJ1 464 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 PMS2P5A8MQ11 134 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms