RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 SFRP2Q96HF1 295 aa8.66□□□□□ -1.02
CLIP1-210ENST00000538120 ZNF48Q96MX3 618 aaPredicted RBP8.66□□□□□ -1.02
CLIP1-210ENST00000538120 TBX15Q96SF7 602 aa8.66□□□□□ -1.02
CLIP1-210ENST00000538120 CACNA1AO00555 2505 aa8.66□□□□□ -1.02
CLIP1-210ENST00000538120 HRNRQ86YZ3 2850 aaPredicted RBP8.66□□□□□ -1.02
CLIP1-210ENST00000538120 SCO2A0A1W2PP80 73 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 IGLV1-47P01700 117 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 IGLV2-23P01705 113 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 CBLN1P23435 193 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 LINC00310P59036 64 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 DTX2Q86UW9 622 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 FLYWCH2Q96CP2 140 aaKnown RBP8.65□□□□□ -1.02
CLIP1-210ENST00000538120 RITA1Q96K30 269 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 HARBI1Q96MB7 349 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 DCHS2Q6V1P9 2916 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 LRBAP50851 2863 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 PIEZO1Q92508 2521 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 IGHV2-26A0A0B4J1V2 119 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 KIR2DL5BA0A0G2JN68 375 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 KIR2DL5BA0A0G2JPC4 375 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 A6NNC1 897 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 C17orf112F2Z3M2 114 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 PDE6DO43924 150 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 ARL14EPLP0DKL9 152 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 NPY1RP25929 384 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 HLA-DRB5Q30154 266 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 SHISA2Q6UWI4 295 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 PDPNQ86YL7 162 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 KIR2DL5AQ8N109 375 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 LY6G5BQ8NDX9 201 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 MGST2Q99735 147 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 HINT2Q9BX68 163 aa8.65□□□□□ -1.02
CLIP1-210ENST00000538120 PPIAL4CA0A0B4J2A2 164 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 A0A1W2PPV4 95 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 F2Z2F3 143 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 C19orf84I3L1E1 186 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 M0R143 59 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 SLC17A3O00476 420 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 SCGB2A1O75556 95 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 ACTL6BO94805 426 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 PPIAL4GP0DN37 164 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 FOXL1Q12952 345 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 MIC13Q5XKP0 118 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 Q6ZWC4 215 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 OCC1Q8TAD7 63 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 NEU4Q8WWR8 484 aaPredicted RBP8.64□□□□□ -1.03
CLIP1-210ENST00000538120 CHODLQ9H9P2 273 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 ENY2Q9NPA8 101 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 GOLT1BQ9Y3E0 138 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 LSM4Q9Y4Z0 139 aaKnown RBP8.64□□□□□ -1.03
CLIP1-210ENST00000538120 CGB1A6NKQ9 187 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 E7EUB6 86 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 F6UZH7 168 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 ZNF25P17030 456 aaPredicted RBP8.64□□□□□ -1.03
CLIP1-210ENST00000538120 MRGPRG-AS1Q2M3A8 158 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 ZNF705AQ6ZN79 300 aaPredicted RBP8.64□□□□□ -1.03
CLIP1-210ENST00000538120 OR8B3Q8NGG8 313 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 OR4C13Q8NGP0 309 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 OR5B3Q8NH48 314 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 TMEM167AQ8TBQ9 72 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 OR8B2Q96RD0 313 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 PLEKHA3Q9HB20 300 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 NDUFA4L2Q9NRX3 87 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 KCNIP2Q9NS61 270 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 WASHC3Q9Y3C0 194 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 YTHDF2Q9Y5A9 579 aaKnown RBP8.64□□□□□ -1.03
CLIP1-210ENST00000538120 ABCA4P78363 2273 aa8.64□□□□□ -1.03
CLIP1-210ENST00000538120 MDFIC2A0A1B0GVS7 189 aa8.63□□□□□ -1.03
CLIP1-210ENST00000538120 K7EN84 100 aa8.63□□□□□ -1.03
CLIP1-210ENST00000538120 RBP4P02753 201 aa8.63□□□□□ -1.03
CLIP1-210ENST00000538120 CD99P14209 185 aa8.63□□□□□ -1.03
CLIP1-210ENST00000538120 OR10J1P30954 320 aa8.63□□□□□ -1.03
CLIP1-210ENST00000538120 CDKN1AP38936 164 aa8.63□□□□□ -1.03
CLIP1-210ENST00000538120 TOMM20LQ6UXN7 152 aa8.63□□□□□ -1.03
CLIP1-210ENST00000538120 OR10W1Q8NGF6 305 aa8.63□□□□□ -1.03
CLIP1-210ENST00000538120 CMTM2Q8TAZ6 248 aa8.63□□□□□ -1.03
CLIP1-210ENST00000538120 GGTLC1Q9BX51 225 aa8.63□□□□□ -1.03
CLIP1-210ENST00000538120 MPDU1O75352 247 aa8.63□□□□□ -1.03
CLIP1-210ENST00000538120 OPRK1P41145 380 aa8.63□□□□□ -1.03
CLIP1-210ENST00000538120 SPATA31B1PQ5VZV4 182 aa8.63□□□□□ -1.03
CLIP1-210ENST00000538120 OR4A5Q8NH83 315 aa8.63□□□□□ -1.03
CLIP1-210ENST00000538120 SSMEM1Q8WWF3 244 aa8.63□□□□□ -1.03
CLIP1-210ENST00000538120 RAB1CQ92928 201 aa8.63□□□□□ -1.03
CLIP1-210ENST00000538120 NPVFQ9HCQ7 196 aa8.63□□□□□ -1.03
CLIP1-210ENST00000538120 MALRD1Q5VYJ5 2156 aa8.62□□□□□ -1.03
CLIP1-210ENST00000538120 IGHV3-72A0A0B4J1Y9 119 aa8.62□□□□□ -1.03
CLIP1-210ENST00000538120 TMEM8BA6NDV4 472 aa8.62□□□□□ -1.03
CLIP1-210ENST00000538120 F8WDY8 70 aa8.62□□□□□ -1.03
CLIP1-210ENST00000538120 BUB1B-PAK6H3BSN5 160 aa8.62□□□□□ -1.03
CLIP1-210ENST00000538120 SERF1AO75920 110 aa8.62□□□□□ -1.03
CLIP1-210ENST00000538120 RNASE2P10153 161 aaKnown RBP8.62□□□□□ -1.03
CLIP1-210ENST00000538120 COL8A1P27658 744 aa8.62□□□□□ -1.03
CLIP1-210ENST00000538120 RPL8P62917 257 aaKnown RBP8.62□□□□□ -1.03
CLIP1-210ENST00000538120 CLEC7AQ9BXN2 247 aa8.62□□□□□ -1.03
CLIP1-210ENST00000538120 TPSG1Q9NRR2 321 aa8.62□□□□□ -1.03
CLIP1-210ENST00000538120 RNF114Q9Y508 228 aa8.62□□□□□ -1.03
CLIP1-210ENST00000538120 PKD1L2Q7Z442 2459 aa8.62□□□□□ -1.03
CLIP1-210ENST00000538120 HIVEP3Q5T1R4 2406 aa8.62□□□□□ -1.03
CLIP1-210ENST00000538120 INS-IGF2F8WCM5 200 aa8.62□□□□□ -1.03
CLIP1-210ENST00000538120 FOXH1O75593 365 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms