RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 PMS2P5A8MQ11 134 aa8.53□□□□□ -1.04
TNFRSF1A-208ENST00000536194 K7EMT4 169 aa8.53□□□□□ -1.04
TNFRSF1A-208ENST00000536194 K7EPK0 472 aa8.53□□□□□ -1.04
TNFRSF1A-208ENST00000536194 PTTG1O95997 202 aa8.53□□□□□ -1.04
TNFRSF1A-208ENST00000536194 RAB11AP62491 216 aa8.53□□□□□ -1.04
TNFRSF1A-208ENST00000536194 LCN12Q6JVE5 192 aa8.53□□□□□ -1.04
TNFRSF1A-208ENST00000536194 ZNF600Q6ZNG1 722 aa8.53□□□□□ -1.04
TNFRSF1A-208ENST00000536194 TMEM61Q8N0U2 210 aa8.53□□□□□ -1.04
TNFRSF1A-208ENST00000536194 DYNLRB2Q8TF09 96 aa8.53□□□□□ -1.04
TNFRSF1A-208ENST00000536194 MARC2Q969Z3 335 aa8.53□□□□□ -1.04
TNFRSF1A-208ENST00000536194 WDR89Q96FK6 387 aaPredicted RBP8.53□□□□□ -1.04
TNFRSF1A-208ENST00000536194 SMIM8Q96KF7 97 aa8.53□□□□□ -1.04
TNFRSF1A-208ENST00000536194 TECRQ9NZ01 308 aaKnown RBP8.53□□□□□ -1.04
TNFRSF1A-208ENST00000536194 PSENENQ9NZ42 101 aa8.53□□□□□ -1.04
TNFRSF1A-208ENST00000536194 MRPL27Q9P0M9 148 aaKnown RBP8.53□□□□□ -1.04
TNFRSF1A-208ENST00000536194 PAIP2BQ9ULR5 123 aaKnown RBP8.53□□□□□ -1.04
TNFRSF1A-208ENST00000536194 LSM4Q9Y4Z0 139 aaKnown RBP8.53□□□□□ -1.04
TNFRSF1A-208ENST00000536194 IGKV1D-37A0A075B6S9 117 aa8.52□□□□□ -1.05
TNFRSF1A-208ENST00000536194 IGKV1OR2-108A0A075B7D4 117 aa8.52□□□□□ -1.05
TNFRSF1A-208ENST00000536194 IGHV3-49A0A0A0MS15 119 aa8.52□□□□□ -1.05
TNFRSF1A-208ENST00000536194 C7orf66A4D0T2 115 aa8.52□□□□□ -1.05
TNFRSF1A-208ENST00000536194 ZNF785A8K8V0 405 aa8.52□□□□□ -1.05
TNFRSF1A-208ENST00000536194 GOSR2O14653 212 aa8.52□□□□□ -1.05
TNFRSF1A-208ENST00000536194 YIF1AO95070 293 aa8.52□□□□□ -1.05
TNFRSF1A-208ENST00000536194 SCAF4O95104 1147 aaKnown RBP8.52□□□□□ -1.05
TNFRSF1A-208ENST00000536194 SIX6O95475 246 aa8.52□□□□□ -1.05
TNFRSF1A-208ENST00000536194 OR10J1P30954 320 aa8.52□□□□□ -1.05
TNFRSF1A-208ENST00000536194 GPX4P36969 197 aaPredicted RBP8.52□□□□□ -1.05
TNFRSF1A-208ENST00000536194 GSG1LQ6UXU4 331 aa8.52□□□□□ -1.05
TNFRSF1A-208ENST00000536194 Q8N1Y9 231 aa8.52□□□□□ -1.05
TNFRSF1A-208ENST00000536194 OR1S2Q8NGQ3 325 aa8.52□□□□□ -1.05
TNFRSF1A-208ENST00000536194 OR2K2Q8NGT1 345 aa8.52□□□□□ -1.05
TNFRSF1A-208ENST00000536194 RAB40CQ96S21 281 aa8.52□□□□□ -1.05
TNFRSF1A-208ENST00000536194 SMPXQ9UHP9 88 aa8.52□□□□□ -1.05
TNFRSF1A-208ENST00000536194 STRAPQ9Y3F4 350 aaKnown RBP8.52□□□□□ -1.05
TNFRSF1A-208ENST00000536194 PRKDCP78527 4128 aaKnown RBP8.52□□□□□ -1.05
TNFRSF1A-208ENST00000536194 TRAV30A0A087WSZ9 112 aa8.51□□□□□ -1.05
TNFRSF1A-208ENST00000536194 IGHV7-4-1A0A0J9YVY3 117 aa8.51□□□□□ -1.05
TNFRSF1A-208ENST00000536194 APOHP02749 345 aaPredicted RBP8.51□□□□□ -1.05
TNFRSF1A-208ENST00000536194 METTL15P1P0C7V9 234 aa8.51□□□□□ -1.05
TNFRSF1A-208ENST00000536194 H2BFSP57053 126 aa8.51□□□□□ -1.05
TNFRSF1A-208ENST00000536194 TAS2R30P59541 319 aa8.51□□□□□ -1.05
TNFRSF1A-208ENST00000536194 YPEL3P61236 119 aaPredicted RBP8.51□□□□□ -1.05
TNFRSF1A-208ENST00000536194 RPP30P78346 268 aaKnown RBP8.51□□□□□ -1.05
TNFRSF1A-208ENST00000536194 ARL16Q0P5N6 197 aa8.51□□□□□ -1.05
TNFRSF1A-208ENST00000536194 RAB32Q13637 225 aa8.51□□□□□ -1.05
TNFRSF1A-208ENST00000536194 TMEM14EPQ6UXP3 125 aa8.51□□□□□ -1.05
TNFRSF1A-208ENST00000536194 LSM5Q9Y4Y9 91 aaKnown RBP8.51□□□□□ -1.05
TNFRSF1A-208ENST00000536194 IGHV3OR16-13A0A075B7E8 117 aa8.5□□□□□ -1.05
TNFRSF1A-208ENST00000536194 IGHV3-74A0A0B4J1X5 117 aa8.5□□□□□ -1.05
TNFRSF1A-208ENST00000536194 CHEK1O14757 476 aa8.5□□□□□ -1.05
TNFRSF1A-208ENST00000536194 TSC22D2O75157 780 aa8.5□□□□□ -1.05
TNFRSF1A-208ENST00000536194 TOMM40O96008 361 aa8.5□□□□□ -1.05
TNFRSF1A-208ENST00000536194 ZNF90Q03938 601 aa8.5□□□□□ -1.05
TNFRSF1A-208ENST00000536194 DEFB121Q5J5C9 76 aa8.5□□□□□ -1.05
TNFRSF1A-208ENST00000536194 OR8G2PQ6IF36 304 aa8.5□□□□□ -1.05
TNFRSF1A-208ENST00000536194 ACOT7LQ6ZUV0 252 aa8.5□□□□□ -1.05
TNFRSF1A-208ENST00000536194 LILRB2Q8N423 598 aa8.5□□□□□ -1.05
TNFRSF1A-208ENST00000536194 SLC35E1Q96K37 410 aa8.5□□□□□ -1.05
TNFRSF1A-208ENST00000536194 RHPN1-AS1Q9BWJ2 59 aa8.5□□□□□ -1.05
TNFRSF1A-208ENST00000536194 ALG5Q9Y673 324 aa8.5□□□□□ -1.05
TNFRSF1A-208ENST00000536194 TRAV14DV4A0A0A6YYC5 116 aa8.49□□□□□ -1.05
TNFRSF1A-208ENST00000536194 CD7P09564 240 aa8.49□□□□□ -1.05
TNFRSF1A-208ENST00000536194 PSG1P11464 419 aa8.49□□□□□ -1.05
TNFRSF1A-208ENST00000536194 S100A10P60903 97 aa8.49□□□□□ -1.05
TNFRSF1A-208ENST00000536194 DCTN2Q13561 401 aaKnown RBP8.49□□□□□ -1.05
TNFRSF1A-208ENST00000536194 USF2Q15853 346 aaPredicted RBP8.49□□□□□ -1.05
TNFRSF1A-208ENST00000536194 GUCA2BQ16661 112 aa8.49□□□□□ -1.05
TNFRSF1A-208ENST00000536194 THAP8Q8NA92 274 aa8.49□□□□□ -1.05
TNFRSF1A-208ENST00000536194 ST8SIA2Q92186 375 aa8.49□□□□□ -1.05
TNFRSF1A-208ENST00000536194 RNF2Q99496 336 aa8.49□□□□□ -1.05
TNFRSF1A-208ENST00000536194 GINS3Q9BRX5 216 aa8.49□□□□□ -1.05
TNFRSF1A-208ENST00000536194 VSIRQ9H7M9 311 aa8.49□□□□□ -1.05
TNFRSF1A-208ENST00000536194 TRAV25A0A0B4J276 109 aa8.48□□□□□ -1.05
TNFRSF1A-208ENST00000536194 IGHV3-66A0A0C4DH42 116 aa8.48□□□□□ -1.05
TNFRSF1A-208ENST00000536194 FAM24AA6NFZ4 105 aa8.48□□□□□ -1.05
TNFRSF1A-208ENST00000536194 ZFP92A6NM28 416 aa8.48□□□□□ -1.05
TNFRSF1A-208ENST00000536194 SSNA1O43805 119 aa8.48□□□□□ -1.05
TNFRSF1A-208ENST00000536194 SCGB2A1O75556 95 aa8.48□□□□□ -1.05
TNFRSF1A-208ENST00000536194 IL4P05112 153 aa8.48□□□□□ -1.05
TNFRSF1A-208ENST00000536194 RD3LP0DJH9 198 aa8.48□□□□□ -1.05
TNFRSF1A-208ENST00000536194 CRYBB3P26998 211 aa8.48□□□□□ -1.05
TNFRSF1A-208ENST00000536194 RRAS2P62070 204 aaPredicted RBP8.48□□□□□ -1.05
TNFRSF1A-208ENST00000536194 FAM90A2PQ658T7 463 aa8.48□□□□□ -1.05
TNFRSF1A-208ENST00000536194 TMEM182Q6ZP80 229 aaPredicted RBP8.48□□□□□ -1.05
TNFRSF1A-208ENST00000536194 Q8WTZ3 238 aa8.48□□□□□ -1.05
TNFRSF1A-208ENST00000536194 TRGV9Q99603 122 aa8.48□□□□□ -1.05
TNFRSF1A-208ENST00000536194 NMES1Q9C002 83 aa8.48□□□□□ -1.05
TNFRSF1A-208ENST00000536194 WFDC10AQ9H1F0 79 aa8.48□□□□□ -1.05
TNFRSF1A-208ENST00000536194 MGAT4CQ9UBM8 478 aa8.48□□□□□ -1.05
TNFRSF1A-208ENST00000536194 SMAD5-AS1Q9Y6J3 95 aa8.48□□□□□ -1.05
TNFRSF1A-208ENST00000536194 U3KQE9 123 aa8.48□□□□□ -1.05
TNFRSF1A-208ENST00000536194 IGSF23A1L1A6 192 aa8.47□□□□□ -1.05
TNFRSF1A-208ENST00000536194 H0YIZ8 118 aa8.47□□□□□ -1.05
TNFRSF1A-208ENST00000536194 L7N2F9 121 aa8.47□□□□□ -1.05
TNFRSF1A-208ENST00000536194 TSPAN4O14817 238 aa8.47□□□□□ -1.05
TNFRSF1A-208ENST00000536194 DEDDO75618 318 aa8.47□□□□□ -1.05
TNFRSF1A-208ENST00000536194 IGHV4-30-4P0DP06 118 aa8.47□□□□□ -1.05
TNFRSF1A-208ENST00000536194 CXCL3P19876 107 aa8.47□□□□□ -1.05
TNFRSF1A-208ENST00000536194 NPPCP23582 126 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms