RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 GIG44P09565 113 aaPredicted RBP3.73□□□□□ -1.81
USH1C-210ENST00000534556 VAMP1P23763 118 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 NPY1RP25929 384 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 CRYBB3P26998 211 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 OPRK1P41145 380 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 HTR2BP41595 481 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 TFPI2P48307 235 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 DEFB1P60022 68 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 ID3Q02535 119 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 ZNF90Q03938 601 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 DHRS2Q13268 280 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 GAMTQ14353 236 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 SPANXN2Q5MJ10 180 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 CASC10Q5T4H9 136 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 ZNF600Q6ZNG1 722 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 TCF24Q7RTU0 167 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 GTSCR1Q86UQ5 136 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 LGI3Q8N145 548 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 CENPSQ8N2Z9 138 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 TMEM116Q8NCL8 245 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 DUSP18Q8NEJ0 188 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 SLC24A4Q8NFF2 622 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 MUC7Q8TAX7 377 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 DTD1Q8TEA8 209 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 SPAG8Q99932 426 aaPredicted RBP3.73□□□□□ -1.81
USH1C-210ENST00000534556 SLC25A21Q9BQT8 299 aaPredicted RBP3.73□□□□□ -1.81
USH1C-210ENST00000534556 KRTAP17-1Q9BYP8 105 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 MS4A6AQ9H2W1 248 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 TUBA4BQ9H853 241 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 MAP6D1Q9H9H5 199 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 TBC1D24Q9ULP9 559 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 KCNIP3Q9Y2W7 256 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 TRAV14DV4A0A0A6YYC5 116 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 DUXBA0A1W2PPF3 345 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 H3BP45 60 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 K7EQG2 157 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 WRBO00258 174 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 CCSO14618 274 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 CYB5BO43169 146 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 ATG12O94817 140 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 OR4E1P0C645 316 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 PSG1P11464 419 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 RPL35AP18077 110 aaKnown RBP3.72□□□□□ -1.81
USH1C-210ENST00000534556 GATA2P23769 480 aaPredicted RBP3.72□□□□□ -1.81
USH1C-210ENST00000534556 OR10J1P30954 320 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 NPBWR1P48145 328 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 AP3S2P59780 193 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 POLR2GP62487 172 aaKnown RBP eCLIP3.72□□□□□ -1.81
USH1C-210ENST00000534556 RELQ04864 619 aaPredicted RBP3.72□□□□□ -1.81
USH1C-210ENST00000534556 ARL16Q0P5N6 197 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 ZFAND6Q6FIF0 208 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 C16orf54Q6UWD8 224 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 RBPMS2Q6ZRY4 209 aaKnown RBP3.72□□□□□ -1.81
USH1C-210ENST00000534556 SLC16A13Q7RTY0 426 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 LYG2Q86SG7 212 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 WFDC3Q8IUB2 231 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 OR4D5Q8NGN0 318 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 OR1S1Q8NH92 325 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 RNASEH2CQ8TDP1 164 aaKnown RBP3.72□□□□□ -1.81
USH1C-210ENST00000534556 DCANP1Q8TF63 244 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 GLMPQ8WWB7 406 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 ACY3Q96HD9 319 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 SCGB3A2Q96PL1 93 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 SPATA25Q9BR10 227 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 SEC22CQ9BRL7 303 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 PDCD10Q9BUL8 212 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 C11orf1Q9H5F2 150 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 ZMAT4Q9H898 229 aa3.72□□□□□ -1.81
USH1C-210ENST00000534556 DNAH2Q9P225 4427 aa3.71□□□□□ -1.81
USH1C-210ENST00000534556 HECTD4Q9Y4D8 3996 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 TRAV6A0A075B6T7 132 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 LOC102724200A0A096LPH7 203 aaPredicted RBP3.71□□□□□ -1.82
USH1C-210ENST00000534556 NAP1L6A6NFF2 107 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 KNCNA6PVL3 124 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 CORTO00230 105 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 LYRM1O43325 122 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 BUB3O43684 328 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 SYNGR2O43760 224 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 TOMM40O96008 361 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 IFNA10P01566 189 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 TCRBP04435 133 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 SLC25A6P12236 298 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 FAUP35544 74 aaKnown RBP3.71□□□□□ -1.82
USH1C-210ENST00000534556 P2RY1P47900 373 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 SUB1P53999 127 aaKnown RBP eCLIP3.71□□□□□ -1.82
USH1C-210ENST00000534556 DEFB131AP59861 70 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 YPEL3P61236 119 aaPredicted RBP3.71□□□□□ -1.82
USH1C-210ENST00000534556 OR2F1Q13607 317 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 DEFB135Q30KP9 77 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 TRIQKQ629K1 86 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 LEMD1Q68G75 181 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 THAP8Q8NA92 274 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 OR51G1Q8NGK1 321 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 OR1S2Q8NGQ3 325 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 DEDD2Q8WXF8 326 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 GGTLC1Q9BX51 225 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 WDR12Q9GZL7 423 aaKnown RBP3.71□□□□□ -1.82
USH1C-210ENST00000534556 C20orf85Q9H1P6 137 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 ENY2Q9NPA8 101 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 NDUFA13Q9P0J0 144 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms