RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 ITLN1Q8WWA0 313 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 KAAG1Q9UBP8 84 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 F11RQ9Y624 299 aaKnown RBP3.31□□□□□ -1.88
SOX6-217ENST00000533870 IGLV3-9A0A075B6K5 115 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 SAA2P0DJI9 122 aaPredicted RBP3.31□□□□□ -1.88
SOX6-217ENST00000533870 CIRBPQ14011 172 aaKnown RBP3.31□□□□□ -1.88
SOX6-217ENST00000533870 SYT8Q8NBV8 401 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 NEU4Q8WWR8 484 aaPredicted RBP3.31□□□□□ -1.88
SOX6-217ENST00000533870 COL4A6Q14031 1691 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 TPRP12270 2363 aaKnown RBP3.31□□□□□ -1.88
SOX6-217ENST00000533870 GGTLC3B5MD39 225 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 PSPNO60542 156 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 CECR9P0C854 216 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 FAM19A2Q8N3H0 131 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 BMPERQ8N8U9 685 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 FSTL3O95633 263 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 CD3EP07766 207 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 MYF5P13349 255 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 Q6ZVH6 145 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 MOB3BQ86TA1 216 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 ABHD17AQ96GS6 310 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 CACNA1CQ13936 2221 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 MUC21A0A0G2JKD1 596 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 MUC21A0A140T8X8 626 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 A0A1W2PPM0 123 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 LTAP01374 205 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 LGALS3P17931 250 aaKnown RBP3.31□□□□□ -1.88
SOX6-217ENST00000533870 PMVKQ15126 192 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 MUC21Q5SSG8 566 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 PEAR1Q5VY43 1037 aaPredicted RBP3.31□□□□□ -1.88
SOX6-217ENST00000533870 CLEC2AQ6UVW9 174 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 PGLYRP4Q96LB8 373 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 RNASE7Q9H1E1 156 aaKnown RBP3.31□□□□□ -1.88
SOX6-217ENST00000533870 DEFB127Q9H1M4 99 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 NDUFA4L2Q9NRX3 87 aa3.31□□□□□ -1.88
SOX6-217ENST00000533870 WNT9BO14905 357 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 ATP5G1P05496 136 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 IGLC1P0CG04 106 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 ATP5G2Q06055 141 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 DMRTC1Q5HYR2 192 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 ZFAND6Q6FIF0 208 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 ZNF329Q86UD4 541 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 PPP1R27Q86WC6 154 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 DMRTC2Q8IXT2 367 aaPredicted RBP3.3□□□□□ -1.88
SOX6-217ENST00000533870 GLMPQ8WWB7 406 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 NHP2Q9NX24 153 aaKnown RBP3.3□□□□□ -1.88
SOX6-217ENST00000533870 ARFGEF1Q9Y6D6 1849 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 CCL4P13236 92 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 EVI2AP22794 236 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 KLRD1Q13241 179 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 RRN3P1Q2M238 152 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 RNASE8Q8TDE3 154 aaKnown RBP3.3□□□□□ -1.88
SOX6-217ENST00000533870 PRSS22Q9GZN4 317 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 CSTL1Q9H114 145 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 SIP14410 1827 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 TRBV19A0A075B6N1 114 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 CCL25O15444 150 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 APOMO95445 188 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 CTSBP07858 339 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 Q71RC1 249 aaPredicted RBP3.3□□□□□ -1.88
SOX6-217ENST00000533870 C5orf24Q7Z6I8 188 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 TMEM141Q96I45 108 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 FOCADQ5VW36 1801 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 COL11A2P13942 1736 aaPredicted RBP3.3□□□□□ -1.88
SOX6-217ENST00000533870 GAGE12JA6NER3 117 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 LINC00473A8K010 186 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 H3BMG7 143 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 GAGE7O76087 117 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 GAGE12FP0CL80 117 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 GAGE12GP0CL81 117 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 GAGE12IP0CL82 117 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 MED14OSP0DP75 135 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 IFITM1P13164 125 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 GAGE4Q13068 117 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 GCSAMLQ5JQS6 135 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 DGAT2L7PQ6IED9 249 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 TDHQ8IZJ6 230 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 NUP37Q8NFH4 326 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 ZNF837Q96EG3 531 aaPredicted RBP3.3□□□□□ -1.88
SOX6-217ENST00000533870 TMEM133Q9H2Q1 129 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 RBAKDNA6NC62 111 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 GAGE12HA6NDE8 117 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 A6NNC1 897 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 HOXA3O43365 443 aaPredicted RBP3.3□□□□□ -1.88
SOX6-217ENST00000533870 DEFB119Q8N690 84 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 DDB2Q92466 427 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 TMEM101Q96IK0 257 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 SGK494Q96LW2 274 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 TM2D2Q9BX73 214 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 PLXNA1Q9UIW2 1896 aa3.3□□□□□ -1.88
SOX6-217ENST00000533870 TRAV21A0A0B4J279 112 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 M0R1B8 84 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 TAX1BP3O14907 124 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 SPRY3O43610 288 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 LYZL6O75951 148 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 MOSP00540 346 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 CGB3P0DN86 165 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 CGB7P0DN87 165 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 PSMB2P49721 201 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 UCNP55089 124 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms