RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 ABCA2Q9BZC7 2435 aa5.65□□□□□ -1.51
RNPC3-209ENST00000533834 TRBV9A0A0B4J1U6 114 aa5.65□□□□□ -1.51
RNPC3-209ENST00000533834 IGLC2P0DOY2 106 aa5.65□□□□□ -1.51
RNPC3-209ENST00000533834 FOXA3P55318 350 aaPredicted RBP5.65□□□□□ -1.51
RNPC3-209ENST00000533834 C19orf54Q5BKX5 351 aa5.65□□□□□ -1.51
RNPC3-209ENST00000533834 C1orf194Q5T5A4 169 aa5.65□□□□□ -1.51
RNPC3-209ENST00000533834 ZNF709Q8N972 641 aa5.65□□□□□ -1.51
RNPC3-209ENST00000533834 GTSF1Q8WW33 167 aa5.65□□□□□ -1.51
RNPC3-209ENST00000533834 TMEM167BQ9NRX6 74 aa5.65□□□□□ -1.51
RNPC3-209ENST00000533834 TMEM14CQ9P0S9 112 aa5.65□□□□□ -1.51
RNPC3-209ENST00000533834 WI2-2373I1.2A0A1W2PRP0 233 aa5.64□□□□□ -1.51
RNPC3-209ENST00000533834 CBLN1P23435 193 aa5.64□□□□□ -1.51
RNPC3-209ENST00000533834 CDKN1AP38936 164 aa5.64□□□□□ -1.51
RNPC3-209ENST00000533834 CA7P43166 264 aa5.64□□□□□ -1.51
RNPC3-209ENST00000533834 TAS2R60P59551 318 aa5.64□□□□□ -1.51
RNPC3-209ENST00000533834 FAM180AQ6UWF9 173 aa5.64□□□□□ -1.51
RNPC3-209ENST00000533834 MMD2Q8IY49 270 aa5.64□□□□□ -1.51
RNPC3-209ENST00000533834 DYNAPQ8N1N2 210 aa5.64□□□□□ -1.51
RNPC3-209ENST00000533834 FLYWCH2Q96CP2 140 aaKnown RBP5.64□□□□□ -1.51
RNPC3-209ENST00000533834 AMMECR1Q9Y4X0 333 aaPredicted RBP5.64□□□□□ -1.51
RNPC3-209ENST00000533834 F11RQ9Y624 299 aaKnown RBP5.64□□□□□ -1.51
RNPC3-209ENST00000533834 CACNA1HO95180 2353 aa5.64□□□□□ -1.51
RNPC3-209ENST00000533834 IGHV1-69-2A0A0G2JMI3 117 aa5.64□□□□□ -1.51
RNPC3-209ENST00000533834 A6NNC1 897 aa5.64□□□□□ -1.51
RNPC3-209ENST00000533834 FCN1O00602 326 aa5.64□□□□□ -1.51
RNPC3-209ENST00000533834 IGKV1-17P01599 117 aa5.64□□□□□ -1.51
RNPC3-209ENST00000533834 APOBEC3AP31941 199 aaPredicted RBP5.64□□□□□ -1.51
RNPC3-209ENST00000533834 REG1BP48304 166 aa5.64□□□□□ -1.51
RNPC3-209ENST00000533834 SLAQ13239 276 aa5.64□□□□□ -1.51
RNPC3-209ENST00000533834 CLEC12BQ2HXU8 276 aa5.64□□□□□ -1.51
RNPC3-209ENST00000533834 RASL11AQ6T310 242 aa5.64□□□□□ -1.51
RNPC3-209ENST00000533834 ZGRF1Q86YA3 2104 aa5.64□□□□□ -1.51
RNPC3-209ENST00000533834 BCL6BQ8N143 479 aaPredicted RBP5.64□□□□□ -1.51
RNPC3-209ENST00000533834 SRSF8Q9BRL6 282 aaKnown RBP5.64□□□□□ -1.51
RNPC3-209ENST00000533834 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.64□□□□□ -1.51
RNPC3-209ENST00000533834 RAB4AP20338 218 aa5.64□□□□□ -1.51
RNPC3-209ENST00000533834 OR10J3Q5JRS4 329 aa5.64□□□□□ -1.51
RNPC3-209ENST00000533834 GNB4Q9HAV0 340 aa5.64□□□□□ -1.51
RNPC3-209ENST00000533834 ZNF355PQ9NSJ1 428 aa5.64□□□□□ -1.51
RNPC3-209ENST00000533834 A0A1W2PN81 502 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 A0A1W2PPV4 95 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 NKX6-3A6NJ46 265 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 UHRF2Q96PU4 802 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 NEU1Q99519 415 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 NDUFAF3Q9BU61 184 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 MRPL18Q9H0U6 180 aaKnown RBP5.63□□□□□ -1.51
RNPC3-209ENST00000533834 DNAJC4Q9NNZ3 241 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 FBXL7Q9UJT9 491 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 A0A1W2PS18 150 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 B9A039 149 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 CORTO00230 105 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 SERF1AO75920 110 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 LGALS7P47929 136 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 ERVFC1-1P60608 527 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 RBPJQ06330 500 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 FANCD2OSQ96PS1 177 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 COMMD5Q9GZQ3 224 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 ZNF586Q9NXT0 402 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 GPX1P07203 203 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 SNRPCP09234 159 aaKnown RBP5.63□□□□□ -1.51
RNPC3-209ENST00000533834 TNFSF4P23510 183 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 CRIP1P50238 77 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 CST9LP1Q5W188 147 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 TCF24Q7RTU0 167 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 DTX2Q86UW9 622 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 WFDC8Q8IUA0 241 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 NPIPB3Q92617 1050 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 NOL4LQ96MY1 436 aaPredicted RBP5.63□□□□□ -1.51
RNPC3-209ENST00000533834 RNF5Q99942 180 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 C20orf144Q9BQM9 153 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 ZNF492Q9P255 531 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 ZMAT5Q9UDW3 170 aaKnown RBP5.63□□□□□ -1.51
RNPC3-209ENST00000533834 TRAPPC1Q9Y5R8 145 aa5.63□□□□□ -1.51
RNPC3-209ENST00000533834 GRIFINA4D1Z8 144 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 EREGO14944 169 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 TOMM40O96008 361 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 MC5RP33032 325 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 SELENOVP59797 346 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 IZUMO1RA6ND01 250 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 HELTA6NFD8 242 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 CRXO43186 299 aaPredicted RBP5.62□□□□□ -1.51
RNPC3-209ENST00000533834 RD3LP0DJH9 198 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 CT83Q5H943 113 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 KCNIP4Q6PIL6 250 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 MISP3Q96FF7 219 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 BTF3L4Q96K17 158 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 RNF2Q99496 336 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 MSRB2Q9Y3D2 182 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 C2orf70A6NJV1 201 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 LYNX1G3V0Z9 82 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 PEX7O00628 323 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 ACTL6BO94805 426 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 LYNX1P0DP58 116 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 NDPQ00604 133 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 NUP35Q8NFH5 326 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 NUDT10Q8NFP7 164 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 VSTM2AQ8TAG5 236 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 NUDT11Q96G61 164 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 SNHG12Q9BXW3 62 aa5.62□□□□□ -1.51
RNPC3-209ENST00000533834 IGLV11-55A0A075B6I3 123 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms