RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 USP24Q9UPU5 2620 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 TRAV3A0A0B4J244 114 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 TRBV6-4A0A1B0GX49 114 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 PIRO00625 290 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 CCL25O15444 150 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 OR2J2O76002 312 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 TNNC2P02585 160 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 TPM3P06753 285 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 RBP1P09455 135 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 OR4E1P0C645 316 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 SMIM10L2AP0DMW4 78 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 SMIM10L2BP0DMW5 78 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 SULT1A1P50225 295 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 ESRGQ1W209 222 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 LINC01554Q52M75 96 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 BRMS1LQ5PSV4 323 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 CLECL1Q8IZS7 167 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 PRRT1Q99946 306 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 C6orf62Q9GZU0 229 aaPredicted RBP0.12□□□□□ -2.39
ATM-220ENST00000533526 DCSTAMPQ9H295 470 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 PLAC8Q9NZF1 115 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 DENND4CQ5VZ89 1909 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 PLXND1Q9Y4D7 1925 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 KDM6AO15550 1401 aaPredicted RBP0.12□□□□□ -2.39
ATM-220ENST00000533526 TNS3Q68CZ2 1445 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 CASP8AP2Q9UKL3 1982 aa0.12□□□□□ -2.39
ATM-220ENST00000533526 A0A087X0T9 212 aa0.11□□□□□ -2.39
ATM-220ENST00000533526 OR2T8A6NH00 312 aa0.11□□□□□ -2.39
ATM-220ENST00000533526 CCL16O15467 120 aa0.11□□□□□ -2.39
ATM-220ENST00000533526 TGOLN2O43493 480 aa0.11□□□□□ -2.39
ATM-220ENST00000533526 IGLV3-1P01715 115 aa0.11□□□□□ -2.39
ATM-220ENST00000533526 HIST1H1EP10412 219 aaKnown RBP0.11□□□□□ -2.39
ATM-220ENST00000533526 ANP32AP39687 249 aaKnown RBP0.11□□□□□ -2.39
ATM-220ENST00000533526 TPM4P67936 248 aa0.11□□□□□ -2.39
ATM-220ENST00000533526 CIRBPQ14011 172 aaKnown RBP0.11□□□□□ -2.39
ATM-220ENST00000533526 TSNQ15631 228 aaKnown RBP0.11□□□□□ -2.39
ATM-220ENST00000533526 SPINK9Q5DT21 86 aa0.11□□□□□ -2.39
ATM-220ENST00000533526 KRT222Q8N1A0 295 aa0.11□□□□□ -2.39
ATM-220ENST00000533526 TMEM254Q8TBM7 123 aa0.11□□□□□ -2.39
ATM-220ENST00000533526 CYSLTR1Q9Y271 337 aa0.11□□□□□ -2.39
ATM-220ENST00000533526 SNRNP200O75643 2136 aaKnown RBP0.11□□□□□ -2.39
ATM-220ENST00000533526 WRNQ14191 1432 aaPredicted RBP eCLIP0.11□□□□□ -2.39
ATM-220ENST00000533526 MED1Q15648 1581 aaPredicted RBP0.11□□□□□ -2.39
ATM-220ENST00000533526 ECM29Q5VYK3 1845 aa0.1□□□□□ -2.39
ATM-220ENST00000533526 TAF1LQ8IZX4 1826 aa0.1□□□□□ -2.39
ATM-220ENST00000533526 IGLV3-32A0A0A0MS00 114 aa0.1□□□□□ -2.39
ATM-220ENST00000533526 CASP1P29466 404 aa0.1□□□□□ -2.39
ATM-220ENST00000533526 RPS20P60866 119 aaKnown RBP0.1□□□□□ -2.39
ATM-220ENST00000533526 ACOT6Q3I5F7 207 aaPredicted RBP0.1□□□□□ -2.39
ATM-220ENST00000533526 CCDC122Q5T0U0 273 aa0.1□□□□□ -2.39
ATM-220ENST00000533526 OR11H6Q8NGC7 330 aa0.1□□□□□ -2.39
ATM-220ENST00000533526 OR2T10Q8NGZ9 312 aa0.1□□□□□ -2.39
ATM-220ENST00000533526 DCUN1D1Q96GG9 259 aa0.1□□□□□ -2.39
ATM-220ENST00000533526 PPP1R2P1Q96PQ5 205 aa0.1□□□□□ -2.39
ATM-220ENST00000533526 HIST1H2BLQ99880 126 aa0.1□□□□□ -2.39
ATM-220ENST00000533526 CCDC90BQ9GZT6 254 aa0.1□□□□□ -2.39
ATM-220ENST00000533526 GUCA1BQ9UMX6 200 aa0.1□□□□□ -2.39
ATM-220ENST00000533526 FAT4Q6V0I7 4981 aa0.1□□□□□ -2.39
ATM-220ENST00000533526 MED12Q93074 2177 aa0.1□□□□□ -2.39
ATM-220ENST00000533526 HECW2Q9P2P5 1572 aa0.1□□□□□ -2.39
ATM-220ENST00000533526 NAV3Q8IVL0 2385 aa0.09□□□□□ -2.39
ATM-220ENST00000533526 TRAV26-2A0A0B4J265 109 aa0.09□□□□□ -2.4
ATM-220ENST00000533526 IGHV1-58A0A0C4DH39 117 aa0.09□□□□□ -2.4
ATM-220ENST00000533526 J3QRK9 145 aa0.09□□□□□ -2.4
ATM-220ENST00000533526 CETN3O15182 167 aa0.09□□□□□ -2.4
ATM-220ENST00000533526 NUPR1O60356 82 aa0.09□□□□□ -2.4
ATM-220ENST00000533526 DHFRP00374 187 aa0.09□□□□□ -2.4
ATM-220ENST00000533526 AP3S2P59780 193 aa0.09□□□□□ -2.4
ATM-220ENST00000533526 C2orf82Q6UX34 121 aa0.09□□□□□ -2.4
ATM-220ENST00000533526 OR6V1Q8N148 313 aa0.09□□□□□ -2.4
ATM-220ENST00000533526 ST6GALNAC3Q8NDV1 305 aa0.09□□□□□ -2.4
ATM-220ENST00000533526 C2orf50Q96LR7 162 aa0.09□□□□□ -2.4
ATM-220ENST00000533526 LINC00467Q9BRT7 94 aa0.09□□□□□ -2.4
ATM-220ENST00000533526 TLNRD1Q9H1K6 362 aa0.09□□□□□ -2.4
ATM-220ENST00000533526 MRPL27Q9P0M9 148 aaKnown RBP0.09□□□□□ -2.4
ATM-220ENST00000533526 ORMDL1Q9P0S3 153 aa0.09□□□□□ -2.4
ATM-220ENST00000533526 PKIGQ9Y2B9 76 aa0.09□□□□□ -2.4
ATM-220ENST00000533526 DOCK5Q9H7D0 1870 aa0.09□□□□□ -2.4
ATM-220ENST00000533526 SCN3AQ9NY46 2000 aa0.08□□□□□ -2.4
ATM-220ENST00000533526 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.08□□□□□ -2.4
ATM-220ENST00000533526 TGIF2-C20orf24A0A0A6YYL0 155 aa0.08□□□□□ -2.4
ATM-220ENST00000533526 TLCD2A6NGC4 264 aa0.08□□□□□ -2.4
ATM-220ENST00000533526 OR4C46A6NHA9 309 aa0.08□□□□□ -2.4
ATM-220ENST00000533526 M0R036 132 aa0.08□□□□□ -2.4
ATM-220ENST00000533526 CHP2O43745 196 aa0.08□□□□□ -2.4
ATM-220ENST00000533526 ZNF682O95780 498 aa0.08□□□□□ -2.4
ATM-220ENST00000533526 IFNA5P01569 189 aa0.08□□□□□ -2.4
ATM-220ENST00000533526 C8orf74Q6P047 294 aa0.08□□□□□ -2.4
ATM-220ENST00000533526 HAGHLQ6PII5 290 aaPredicted RBP0.08□□□□□ -2.4
ATM-220ENST00000533526 EXOC3-AS1Q8N2X6 119 aa0.08□□□□□ -2.4
ATM-220ENST00000533526 OR52R1Q8NGF1 315 aa0.08□□□□□ -2.4
ATM-220ENST00000533526 OR8D4Q8NGM9 314 aa0.08□□□□□ -2.4
ATM-220ENST00000533526 CMSS1Q9BQ75 279 aaKnown RBP0.08□□□□□ -2.4
ATM-220ENST00000533526 LLPHQ9BRT6 129 aaKnown RBP0.08□□□□□ -2.4
ATM-220ENST00000533526 RNF122Q9H9V4 155 aa0.08□□□□□ -2.4
ATM-220ENST00000533526 VPS29Q9UBQ0 182 aa0.08□□□□□ -2.4
ATM-220ENST00000533526 TNFSF18Q9UNG2 199 aa0.08□□□□□ -2.4
ATM-220ENST00000533526 NOSIPQ9Y314 301 aaKnown RBP0.08□□□□□ -2.4
ATM-220ENST00000533526 CHCHD2Q9Y6H1 151 aaPredicted RBP0.08□□□□□ -2.4
ATM-220ENST00000533526 PHRF1Q9P1Y6 1649 aaKnown RBP0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms