RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 UBE2CO00762 179 aa10.2□□□□□ -0.78
RAD50-209ENST00000533482 COL25A1Q9BXS0 654 aaPredicted RBP10.2□□□□□ -0.78
RAD50-209ENST00000533482 MRPL32Q9BYC8 188 aaKnown RBP10.2□□□□□ -0.78
RAD50-209ENST00000533482 ZMAT5Q9UDW3 170 aaKnown RBP10.2□□□□□ -0.78
RAD50-209ENST00000533482 TMEM189A5PLL7 270 aa10.2□□□□□ -0.78
RAD50-209ENST00000533482 TMEM178BH3BS89 294 aa10.2□□□□□ -0.78
RAD50-209ENST00000533482 CD33P20138 364 aa10.2□□□□□ -0.78
RAD50-209ENST00000533482 PRCDQ00LT1 54 aa10.2□□□□□ -0.78
RAD50-209ENST00000533482 TWIST1Q15672 202 aa10.2□□□□□ -0.78
RAD50-209ENST00000533482 TMEM30BQ3MIR4 351 aa10.2□□□□□ -0.78
RAD50-209ENST00000533482 GSX1Q9H4S2 264 aaPredicted RBP10.2□□□□□ -0.78
RAD50-209ENST00000533482 TRAV1-1A0A0B4J248 108 aa10.2□□□□□ -0.78
RAD50-209ENST00000533482 FOXI3A8MTJ6 420 aaPredicted RBP10.2□□□□□ -0.78
RAD50-209ENST00000533482 SMAD7O15105 426 aaKnown RBP10.2□□□□□ -0.78
RAD50-209ENST00000533482 HINT1P49773 126 aaPredicted RBP10.2□□□□□ -0.78
RAD50-209ENST00000533482 PDLIM4P50479 330 aa10.2□□□□□ -0.78
RAD50-209ENST00000533482 TCF15Q12870 199 aa10.2□□□□□ -0.78
RAD50-209ENST00000533482 SPATA45Q537H7 98 aa10.2□□□□□ -0.78
RAD50-209ENST00000533482 FAM90A2PQ658T7 463 aa10.2□□□□□ -0.78
RAD50-209ENST00000533482 OR4C5Q8NGB2 326 aa10.2□□□□□ -0.78
RAD50-209ENST00000533482 SSBP4Q9BWG4 385 aaPredicted RBP10.2□□□□□ -0.78
RAD50-209ENST00000533482 C7orf69Q9H7B7 122 aa10.2□□□□□ -0.78
RAD50-209ENST00000533482 YTHDF2Q9Y5A9 579 aaKnown RBP10.2□□□□□ -0.78
RAD50-209ENST00000533482 SERF1AO75920 110 aa10.19□□□□□ -0.78
RAD50-209ENST00000533482 COL8A2P25067 703 aa10.19□□□□□ -0.78
RAD50-209ENST00000533482 KLF17Q5JT82 389 aaPredicted RBP10.19□□□□□ -0.78
RAD50-209ENST00000533482 IGHV3-11P01762 117 aa10.19□□□□□ -0.78
RAD50-209ENST00000533482 GPR183P32249 361 aa10.19□□□□□ -0.78
RAD50-209ENST00000533482 PPP1R27Q86WC6 154 aa10.19□□□□□ -0.78
RAD50-209ENST00000533482 CACNG8Q8WXS5 425 aa10.19□□□□□ -0.78
RAD50-209ENST00000533482 FAM168AQ92567 244 aa10.19□□□□□ -0.78
RAD50-209ENST00000533482 HIST1H2BLQ99880 126 aa10.19□□□□□ -0.78
RAD50-209ENST00000533482 VPS25Q9BRG1 176 aa10.19□□□□□ -0.78
RAD50-209ENST00000533482 AGMATQ9BSE5 352 aa10.19□□□□□ -0.78
RAD50-209ENST00000533482 LEPROTL1O95214 131 aa10.19□□□□□ -0.78
RAD50-209ENST00000533482 TEX38Q6PEX7 206 aa10.19□□□□□ -0.78
RAD50-209ENST00000533482 EML6Q6ZMW3 1958 aa10.19□□□□□ -0.78
RAD50-209ENST00000533482 E7EQL1 145 aa10.19□□□□□ -0.78
RAD50-209ENST00000533482 TGFAP01135 160 aa10.19□□□□□ -0.78
RAD50-209ENST00000533482 STAG3L2P0CL84 134 aa10.19□□□□□ -0.78
RAD50-209ENST00000533482 STAG3L3P0CL85 134 aa10.19□□□□□ -0.78
RAD50-209ENST00000533482 CA7P43166 264 aa10.19□□□□□ -0.78
RAD50-209ENST00000533482 LINC01551Q86U37 167 aa10.19□□□□□ -0.78
RAD50-209ENST00000533482 SSC4DQ8WTU2 575 aa10.19□□□□□ -0.78
RAD50-209ENST00000533482 C2CD3Q4AC94 2353 aa10.18□□□□□ -0.78
RAD50-209ENST00000533482 K7ENP7 123 aa10.18□□□□□ -0.78
RAD50-209ENST00000533482 HAX1O00165 279 aa10.18□□□□□ -0.78
RAD50-209ENST00000533482 IGKV3-20P01619 116 aa10.18□□□□□ -0.78
RAD50-209ENST00000533482 SPANXN1Q5VSR9 72 aa10.18□□□□□ -0.78
RAD50-209ENST00000533482 TCF24Q7RTU0 167 aa10.18□□□□□ -0.78
RAD50-209ENST00000533482 NEU4Q8WWR8 484 aaPredicted RBP10.18□□□□□ -0.78
RAD50-209ENST00000533482 C16orf92Q96LL3 132 aa10.18□□□□□ -0.78
RAD50-209ENST00000533482 ADMP35318 185 aa10.18□□□□□ -0.78
RAD50-209ENST00000533482 ATP5IP56385 69 aaPredicted RBP10.18□□□□□ -0.78
RAD50-209ENST00000533482 ATG101Q9BSB4 218 aa10.18□□□□□ -0.78
RAD50-209ENST00000533482 PRO3102Q9H379 93 aa10.18□□□□□ -0.78
RAD50-209ENST00000533482 GAFA1Q96PS6 74 aa10.18□□□□□ -0.78
RAD50-209ENST00000533482 TBL2Q9Y4P3 447 aaKnown RBP10.18□□□□□ -0.78
RAD50-209ENST00000533482 TRBV24-1A0A075B6N3 115 aa10.17□□□□□ -0.78
RAD50-209ENST00000533482 THBDP07204 575 aa10.17□□□□□ -0.78
RAD50-209ENST00000533482 PYY3Q5JQD4 70 aa10.17□□□□□ -0.78
RAD50-209ENST00000533482 FBXL7Q9UJT9 491 aa10.17□□□□□ -0.78
RAD50-209ENST00000533482 MSRB2Q9Y3D2 182 aa10.17□□□□□ -0.78
RAD50-209ENST00000533482 MED12LQ86YW9 2145 aa10.17□□□□□ -0.78
RAD50-209ENST00000533482 CKS2P33552 79 aa10.17□□□□□ -0.78
RAD50-209ENST00000533482 UNQ6494/PRO21346Q6UXR6 183 aa10.17□□□□□ -0.78
RAD50-209ENST00000533482 HIST3H2BBQ8N257 126 aa10.17□□□□□ -0.78
RAD50-209ENST00000533482 TMEM116Q8NCL8 245 aa10.17□□□□□ -0.78
RAD50-209ENST00000533482 GOLT1BQ9Y3E0 138 aa10.17□□□□□ -0.78
RAD50-209ENST00000533482 USP9XQ93008 2570 aaPredicted RBP10.17□□□□□ -0.78
RAD50-209ENST00000533482 HIGD1CA8MV81 97 aa10.17□□□□□ -0.78
RAD50-209ENST00000533482 MGPP08493 103 aa10.17□□□□□ -0.78
RAD50-209ENST00000533482 ERVK11-1P61568 191 aa10.17□□□□□ -0.78
RAD50-209ENST00000533482 TMEM170AQ8WVE7 144 aa10.17□□□□□ -0.78
RAD50-209ENST00000533482 C14orf144Q96I85 54 aa10.17□□□□□ -0.78
RAD50-209ENST00000533482 OR2T8A6NH00 312 aa10.16□□□□□ -0.78
RAD50-209ENST00000533482 SH2D7A6NKC9 451 aaPredicted RBP10.16□□□□□ -0.78
RAD50-209ENST00000533482 FOLR2P14207 255 aa10.16□□□□□ -0.78
RAD50-209ENST00000533482 ZNF726P1Q15940 193 aa10.16□□□□□ -0.78
RAD50-209ENST00000533482 HAPLN4Q86UW8 402 aa10.16□□□□□ -0.78
RAD50-209ENST00000533482 ST6GALNAC3Q8NDV1 305 aa10.16□□□□□ -0.78
RAD50-209ENST00000533482 OR4B1Q8NGF8 309 aa10.16□□□□□ -0.78
RAD50-209ENST00000533482 IFITM10A6NMD0 228 aa10.16□□□□□ -0.78
RAD50-209ENST00000533482 IGHV1-8P0DP01 117 aa10.16□□□□□ -0.78
RAD50-209ENST00000533482 RELQ04864 619 aaPredicted RBP10.16□□□□□ -0.78
RAD50-209ENST00000533482 TMEM256Q8N2U0 113 aa10.16□□□□□ -0.78
RAD50-209ENST00000533482 RNASEH2CQ8TDP1 164 aaKnown RBP10.16□□□□□ -0.78
RAD50-209ENST00000533482 SLX1AQ9BQ83 275 aa10.16□□□□□ -0.78
RAD50-209ENST00000533482 PLA2G2EQ9NZK7 142 aa10.16□□□□□ -0.78
RAD50-209ENST00000533482 IGHV2-26A0A0B4J1V2 119 aa10.16□□□□□ -0.78
RAD50-209ENST00000533482 TRGV3P03979 118 aa10.16□□□□□ -0.78
RAD50-209ENST00000533482 RPLP1P05386 114 aaKnown RBP10.16□□□□□ -0.78
RAD50-209ENST00000533482 TMEM78Q5T7P6 136 aa10.16□□□□□ -0.78
RAD50-209ENST00000533482 TMEM219Q86XT9 240 aa10.16□□□□□ -0.78
RAD50-209ENST00000533482 ZNF738Q8NE65 137 aa10.16□□□□□ -0.78
RAD50-209ENST00000533482 METTL26Q96S19 204 aa10.16□□□□□ -0.78
RAD50-209ENST00000533482 Q9H3A6 140 aa10.16□□□□□ -0.78
RAD50-209ENST00000533482 LOC102724200A0A096LPH7 203 aaPredicted RBP10.15□□□□□ -0.78
RAD50-209ENST00000533482 A0A1B0GW64 132 aa10.15□□□□□ -0.78
RAD50-209ENST00000533482 AMBPP02760 352 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms