RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 GINS3Q9BRX5 216 aa15.34■□□□□ 0.05
CCS-208ENST00000533244 TRAV14DV4A0A0A6YYC5 116 aa15.33■□□□□ 0.04
CCS-208ENST00000533244 SCAF4O95104 1147 aaKnown RBP15.33■□□□□ 0.04
CCS-208ENST00000533244 IFNA4P05014 189 aa15.33■□□□□ 0.04
CCS-208ENST00000533244 GPX4P36969 197 aaPredicted RBP15.33■□□□□ 0.04
CCS-208ENST00000533244 TIGITQ495A1 244 aa15.33■□□□□ 0.04
CCS-208ENST00000533244 RBPMS2Q6ZRY4 209 aaKnown RBP15.33■□□□□ 0.04
CCS-208ENST00000533244 SBSPONQ8IVN8 264 aa15.33■□□□□ 0.04
CCS-208ENST00000533244 ZNF431Q8TF32 576 aaPredicted RBP15.33■□□□□ 0.04
CCS-208ENST00000533244 SPAG8Q99932 426 aaPredicted RBP15.33■□□□□ 0.04
CCS-208ENST00000533244 RHPN1-AS1Q9BWJ2 59 aa15.33■□□□□ 0.04
CCS-208ENST00000533244 OR10J1P30954 320 aa15.32■□□□□ 0.04
CCS-208ENST00000533244 YPEL3P61236 119 aaPredicted RBP15.32■□□□□ 0.04
CCS-208ENST00000533244 NPIPB3Q92617 1050 aa15.32■□□□□ 0.04
CCS-208ENST00000533244 ASCL2Q99929 193 aa15.32■□□□□ 0.04
CCS-208ENST00000533244 SEC22CQ9BRL7 303 aa15.32■□□□□ 0.04
CCS-208ENST00000533244 HUWE1Q7Z6Z7 4374 aaKnown RBP15.31■□□□□ 0.04
CCS-208ENST00000533244 PRSS46E5RG02 174 aa15.31■□□□□ 0.04
CCS-208ENST00000533244 WRBO00258 174 aa15.31■□□□□ 0.04
CCS-208ENST00000533244 NKX2-1P43699 371 aaPredicted RBP15.31■□□□□ 0.04
CCS-208ENST00000533244 RAB11AP62491 216 aa15.31■□□□□ 0.04
CCS-208ENST00000533244 IAH1Q2TAA2 248 aaPredicted RBP15.31■□□□□ 0.04
CCS-208ENST00000533244 LAMTOR1Q6IAA8 161 aa15.31■□□□□ 0.04
CCS-208ENST00000533244 ZBTB8BQ8NAP8 495 aaPredicted RBP15.31■□□□□ 0.04
CCS-208ENST00000533244 ACY3Q96HD9 319 aa15.31■□□□□ 0.04
CCS-208ENST00000533244 RNF2Q99496 336 aa15.31■□□□□ 0.04
CCS-208ENST00000533244 VSIRQ9H7M9 311 aa15.31■□□□□ 0.04
CCS-208ENST00000533244 POLR2GP62487 172 aaKnown RBP eCLIP15.3■□□□□ 0.04
CCS-208ENST00000533244 GAMTQ14353 236 aa15.3■□□□□ 0.04
CCS-208ENST00000533244 FAM90A2PQ658T7 463 aa15.3■□□□□ 0.04
CCS-208ENST00000533244 IGHV3-49A0A0A0MS15 119 aa15.29■□□□□ 0.04
CCS-208ENST00000533244 APOHP02749 345 aaPredicted RBP15.29■□□□□ 0.04
CCS-208ENST00000533244 IL5P05113 134 aa15.29■□□□□ 0.04
CCS-208ENST00000533244 RPP30P78346 268 aaKnown RBP15.29■□□□□ 0.04
CCS-208ENST00000533244 LINC00322Q6ZN03 302 aaPredicted RBP15.29■□□□□ 0.04
CCS-208ENST00000533244 ENKURQ8TC29 256 aa15.29■□□□□ 0.04
CCS-208ENST00000533244 WFDC10AQ9H1F0 79 aa15.29■□□□□ 0.04
CCS-208ENST00000533244 STAB2Q8WWQ8 2551 aa15.28■□□□□ 0.04
CCS-208ENST00000533244 OR11H12B2RN74 326 aa15.28■□□□□ 0.04
CCS-208ENST00000533244 CRYBB3P26998 211 aa15.28■□□□□ 0.04
CCS-208ENST00000533244 C12orf45Q8N5I9 185 aaPredicted RBP15.28■□□□□ 0.04
CCS-208ENST00000533244 DEFB125Q8N687 156 aa15.28■□□□□ 0.04
CCS-208ENST00000533244 ST8SIA2Q92186 375 aa15.28■□□□□ 0.04
CCS-208ENST00000533244 IGKV1D-37A0A075B6S9 117 aa15.27■□□□□ 0.04
CCS-208ENST00000533244 IGHV3OR16-13A0A075B7E8 117 aa15.27■□□□□ 0.04
CCS-208ENST00000533244 IGHV3-74A0A0B4J1X5 117 aa15.27■□□□□ 0.04
CCS-208ENST00000533244 CCSO14618 274 aa15.27■□□□□ 0.04
CCS-208ENST00000533244 TOMM40O96008 361 aa15.27■□□□□ 0.04
CCS-208ENST00000533244 BMI1P35226 326 aa15.27■□□□□ 0.04
CCS-208ENST00000533244 SPANXN5Q5MJ07 72 aa15.27■□□□□ 0.04
CCS-208ENST00000533244 NRARPQ7Z6K4 114 aa15.27■□□□□ 0.04
CCS-208ENST00000533244 Q8WTZ3 238 aa15.27■□□□□ 0.04
CCS-208ENST00000533244 SLC35E1Q96K37 410 aa15.27■□□□□ 0.04
CCS-208ENST00000533244 SMIM8Q96KF7 97 aa15.27■□□□□ 0.04
CCS-208ENST00000533244 STRAPQ9Y3F4 350 aaKnown RBP15.27■□□□□ 0.04
CCS-208ENST00000533244 H3BP45 60 aa15.26■□□□□ 0.03
CCS-208ENST00000533244 CD5P06127 495 aa15.26■□□□□ 0.03
CCS-208ENST00000533244 NPPCP23582 126 aa15.26■□□□□ 0.03
CCS-208ENST00000533244 PAX9P55771 341 aa15.26■□□□□ 0.03
CCS-208ENST00000533244 LILRB2Q8N423 598 aa15.26■□□□□ 0.03
CCS-208ENST00000533244 METTL26Q96S19 204 aa15.26■□□□□ 0.03
CCS-208ENST00000533244 TM2D3Q9BRN9 247 aa15.26■□□□□ 0.03
CCS-208ENST00000533244 TUBA4BQ9H853 241 aa15.26■□□□□ 0.03
CCS-208ENST00000533244 RCL1Q9Y2P8 373 aaKnown RBP15.26■□□□□ 0.03
CCS-208ENST00000533244 U3KQE9 123 aa15.26■□□□□ 0.03
CCS-208ENST00000533244 SSSCA1O60232 199 aa15.26■□□□□ 0.03
CCS-208ENST00000533244 PSENENQ9NZ42 101 aa15.26■□□□□ 0.03
CCS-208ENST00000533244 PAIP2BQ9ULR5 123 aaKnown RBP15.26■□□□□ 0.03
CCS-208ENST00000533244 TENM3Q9P273 2699 aa15.25■□□□□ 0.03
CCS-208ENST00000533244 OR4C46A6NHA9 309 aa15.25■□□□□ 0.03
CCS-208ENST00000533244 PMS2P5A8MQ11 134 aa15.25■□□□□ 0.03
CCS-208ENST00000533244 MBPP02686 304 aaPredicted RBP15.25■□□□□ 0.03
CCS-208ENST00000533244 RD3LP0DJH9 198 aa15.25■□□□□ 0.03
CCS-208ENST00000533244 PSG1P11464 419 aa15.25■□□□□ 0.03
CCS-208ENST00000533244 TAS2R30P59541 319 aa15.25■□□□□ 0.03
CCS-208ENST00000533244 USF2Q15853 346 aaPredicted RBP15.25■□□□□ 0.03
CCS-208ENST00000533244 TCF24Q7RTU0 167 aa15.25■□□□□ 0.03
CCS-208ENST00000533244 THAP8Q8NA92 274 aa15.25■□□□□ 0.03
CCS-208ENST00000533244 RAB40CQ96S21 281 aa15.25■□□□□ 0.03
CCS-208ENST00000533244 FAM110AQ9BQ89 295 aa15.25■□□□□ 0.03
CCS-208ENST00000533244 TMEM231Q9H6L2 316 aa15.25■□□□□ 0.03
CCS-208ENST00000533244 SRD5A3Q9H8P0 318 aa15.25■□□□□ 0.03
CCS-208ENST00000533244 GSKIPQ9P0R6 139 aa15.25■□□□□ 0.03
CCS-208ENST00000533244 U3KQK5 164 aa15.25■□□□□ 0.03
CCS-208ENST00000533244 IGKV1OR2-108A0A075B7D4 117 aa15.24■□□□□ 0.03
CCS-208ENST00000533244 A0A1W2PS18 150 aa15.24■□□□□ 0.03
CCS-208ENST00000533244 RBMY1BA6NDE4 496 aaKnown RBP15.24■□□□□ 0.03
CCS-208ENST00000533244 RBMY1EA6NEQ0 496 aaKnown RBP15.24■□□□□ 0.03
CCS-208ENST00000533244 SCGB1D2O95969 90 aa15.24■□□□□ 0.03
CCS-208ENST00000533244 IL4P05112 153 aa15.24■□□□□ 0.03
CCS-208ENST00000533244 RBMY1DP0C7P1 496 aaKnown RBP15.24■□□□□ 0.03
CCS-208ENST00000533244 DEFA1P59665 94 aa15.24■□□□□ 0.03
CCS-208ENST00000533244 DEFA3P59666 94 aa15.24■□□□□ 0.03
CCS-208ENST00000533244 HAGHQ16775 308 aa15.24■□□□□ 0.03
CCS-208ENST00000533244 ODF3L2Q3SX64 289 aa15.24■□□□□ 0.03
CCS-208ENST00000533244 TMEM14EPQ6UXP3 125 aa15.24■□□□□ 0.03
CCS-208ENST00000533244 IGHV3-66A0A0C4DH42 116 aa15.23■□□□□ 0.03
CCS-208ENST00000533244 ZFP92A6NM28 416 aa15.23■□□□□ 0.03
CCS-208ENST00000533244 TSC22D2O75157 780 aa15.23■□□□□ 0.03
CCS-208ENST00000533244 TRGV9Q99603 122 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms