RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 OR5C1Q8NGR4 320 aa8.66□□□□□ -1.02
TRAPPC4-213ENST00000533149 FBXO7Q9Y3I1 522 aa8.66□□□□□ -1.02
TRAPPC4-213ENST00000533149 IGHG4P01861 327 aa8.65□□□□□ -1.02
TRAPPC4-213ENST00000533149 HBG1P69891 147 aa8.65□□□□□ -1.02
TRAPPC4-213ENST00000533149 HBG2P69892 147 aa8.65□□□□□ -1.02
TRAPPC4-213ENST00000533149 SLC38A11Q08AI6 406 aa8.65□□□□□ -1.02
TRAPPC4-213ENST00000533149 CLINT1Q14677 625 aa8.65□□□□□ -1.02
TRAPPC4-213ENST00000533149 HAGHQ16775 308 aa8.65□□□□□ -1.02
TRAPPC4-213ENST00000533149 ATP6V1FQ16864 119 aa8.65□□□□□ -1.02
TRAPPC4-213ENST00000533149 ASPHD1Q5U4P2 390 aa8.65□□□□□ -1.02
TRAPPC4-213ENST00000533149 RPL7L1Q6DKI1 246 aaKnown RBP8.65□□□□□ -1.02
TRAPPC4-213ENST00000533149 LFNGQ8NES3 379 aa8.65□□□□□ -1.02
TRAPPC4-213ENST00000533149 ZNF471Q9BX82 626 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC4-213ENST00000533149 PARP11Q9NR21 331 aa8.65□□□□□ -1.02
TRAPPC4-213ENST00000533149 BORCS7-ASMTA0A0B4J1R7 106 aa8.64□□□□□ -1.03
TRAPPC4-213ENST00000533149 ATP6V0E1O15342 81 aa8.64□□□□□ -1.03
TRAPPC4-213ENST00000533149 DFFBO76075 338 aa8.64□□□□□ -1.03
TRAPPC4-213ENST00000533149 SCAF4O95104 1147 aaKnown RBP8.64□□□□□ -1.03
TRAPPC4-213ENST00000533149 CRYGCP07315 174 aa8.64□□□□□ -1.03
TRAPPC4-213ENST00000533149 CTRB1P17538 263 aa8.64□□□□□ -1.03
TRAPPC4-213ENST00000533149 RUNX1Q01196 453 aa8.64□□□□□ -1.03
TRAPPC4-213ENST00000533149 IFITM2Q01629 132 aa8.64□□□□□ -1.03
TRAPPC4-213ENST00000533149 MLANAQ16655 118 aa8.64□□□□□ -1.03
TRAPPC4-213ENST00000533149 PVRIGQ6DKI7 326 aa8.64□□□□□ -1.03
TRAPPC4-213ENST00000533149 CTRB2Q6GPI1 263 aa8.64□□□□□ -1.03
TRAPPC4-213ENST00000533149 SLC25A24Q6NUK1 477 aa8.64□□□□□ -1.03
TRAPPC4-213ENST00000533149 C19orf35Q6ZS72 473 aa8.64□□□□□ -1.03
TRAPPC4-213ENST00000533149 Q8N1Y9 231 aa8.64□□□□□ -1.03
TRAPPC4-213ENST00000533149 TTC9CQ8N5M4 171 aa8.64□□□□□ -1.03
TRAPPC4-213ENST00000533149 OR5T1Q8NG75 326 aa8.64□□□□□ -1.03
TRAPPC4-213ENST00000533149 OR1P1Q8NH06 330 aa8.64□□□□□ -1.03
TRAPPC4-213ENST00000533149 PINX1Q96BK5 328 aaKnown RBP8.64□□□□□ -1.03
TRAPPC4-213ENST00000533149 UBE2E2Q96LR5 201 aa8.64□□□□□ -1.03
TRAPPC4-213ENST00000533149 F11RQ9Y624 299 aaKnown RBP8.64□□□□□ -1.03
TRAPPC4-213ENST00000533149 NPIPB5A8MRT5 1133 aa8.63□□□□□ -1.03
TRAPPC4-213ENST00000533149 PRSS46E5RG02 174 aa8.63□□□□□ -1.03
TRAPPC4-213ENST00000533149 PSMB8P28062 276 aa8.63□□□□□ -1.03
TRAPPC4-213ENST00000533149 MFAP2P55001 183 aa8.63□□□□□ -1.03
TRAPPC4-213ENST00000533149 DLK1P80370 383 aa8.63□□□□□ -1.03
TRAPPC4-213ENST00000533149 ACSM6Q6P461 480 aa8.63□□□□□ -1.03
TRAPPC4-213ENST00000533149 UNQ5815/PRO19632Q6UWF5 114 aa8.63□□□□□ -1.03
TRAPPC4-213ENST00000533149 LILRB2Q8N423 598 aa8.63□□□□□ -1.03
TRAPPC4-213ENST00000533149 ZNF114Q8NC26 417 aa8.63□□□□□ -1.03
TRAPPC4-213ENST00000533149 RNASEH2CQ8TDP1 164 aaKnown RBP8.63□□□□□ -1.03
TRAPPC4-213ENST00000533149 ST8SIA2Q92186 375 aa8.63□□□□□ -1.03
TRAPPC4-213ENST00000533149 TMEM68Q96MH6 324 aa8.63□□□□□ -1.03
TRAPPC4-213ENST00000533149 ATP5SQ99766 215 aa8.63□□□□□ -1.03
TRAPPC4-213ENST00000533149 TMEM147Q9BVK8 224 aa8.63□□□□□ -1.03
TRAPPC4-213ENST00000533149 SLA2Q9H6Q3 261 aa8.63□□□□□ -1.03
TRAPPC4-213ENST00000533149 G3V318 75 aa8.62□□□□□ -1.03
TRAPPC4-213ENST00000533149 I3L521 148 aa8.62□□□□□ -1.03
TRAPPC4-213ENST00000533149 CFDP00746 253 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC4-213ENST00000533149 IFNA5P01569 189 aa8.62□□□□□ -1.03
TRAPPC4-213ENST00000533149 DEFA4P12838 97 aa8.62□□□□□ -1.03
TRAPPC4-213ENST00000533149 TPT1P13693 172 aaKnown RBP8.62□□□□□ -1.03
TRAPPC4-213ENST00000533149 GPX4P36969 197 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC4-213ENST00000533149 EIF5AP63241 154 aaKnown RBP8.62□□□□□ -1.03
TRAPPC4-213ENST00000533149 CFHR3Q02985 330 aa8.62□□□□□ -1.03
TRAPPC4-213ENST00000533149 ECSCRQ19T08 205 aa8.62□□□□□ -1.03
TRAPPC4-213ENST00000533149 BAP18Q8IXM2 172 aa8.62□□□□□ -1.03
TRAPPC4-213ENST00000533149 UBAC2Q8NBM4 344 aa8.62□□□□□ -1.03
TRAPPC4-213ENST00000533149 OR1L6Q8NGR2 347 aa8.62□□□□□ -1.03
TRAPPC4-213ENST00000533149 STOML3Q8TAV4 291 aa8.62□□□□□ -1.03
TRAPPC4-213ENST00000533149 SCGB1C1Q8TD33 95 aa8.62□□□□□ -1.03
TRAPPC4-213ENST00000533149 MYOZ3Q8TDC0 251 aa8.62□□□□□ -1.03
TRAPPC4-213ENST00000533149 MISP3Q96FF7 219 aa8.62□□□□□ -1.03
TRAPPC4-213ENST00000533149 GGACTQ9BVM4 153 aa8.62□□□□□ -1.03
TRAPPC4-213ENST00000533149 ARV1Q9H2C2 271 aa8.62□□□□□ -1.03
TRAPPC4-213ENST00000533149 UQCC1Q9NVA1 299 aa8.62□□□□□ -1.03
TRAPPC4-213ENST00000533149 DMRT1Q9Y5R6 373 aa8.62□□□□□ -1.03
TRAPPC4-213ENST00000533149 PRH1P02810 166 aa8.61□□□□□ -1.03
TRAPPC4-213ENST00000533149 IGF1P05019 195 aa8.61□□□□□ -1.03
TRAPPC4-213ENST00000533149 CRIP2P52943 208 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC4-213ENST00000533149 ZNF266Q14584 549 aa8.61□□□□□ -1.03
TRAPPC4-213ENST00000533149 VWC2Q2TAL6 325 aa8.61□□□□□ -1.03
TRAPPC4-213ENST00000533149 AKIRIN2Q53H80 203 aa8.61□□□□□ -1.03
TRAPPC4-213ENST00000533149 CACNG8Q8WXS5 425 aa8.61□□□□□ -1.03
TRAPPC4-213ENST00000533149 DLX4Q92988 240 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC4-213ENST00000533149 GINS3Q9BRX5 216 aa8.61□□□□□ -1.03
TRAPPC4-213ENST00000533149 FNDC4Q9H6D8 234 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC4-213ENST00000533149 ZNF580Q9UK33 172 aa8.61□□□□□ -1.03
TRAPPC4-213ENST00000533149 TRAV41A0A0B4J266 112 aa8.6□□□□□ -1.03
TRAPPC4-213ENST00000533149 SMCO3A2RU48 225 aa8.6□□□□□ -1.03
TRAPPC4-213ENST00000533149 IGHV3-48P01763 117 aa8.6□□□□□ -1.03
TRAPPC4-213ENST00000533149 GAMTQ14353 236 aa8.6□□□□□ -1.03
TRAPPC4-213ENST00000533149 C19orf54Q5BKX5 351 aa8.6□□□□□ -1.03
TRAPPC4-213ENST00000533149 TEX261Q6UWH6 196 aa8.6□□□□□ -1.03
TRAPPC4-213ENST00000533149 ZNF491Q8N8L2 437 aa8.6□□□□□ -1.03
TRAPPC4-213ENST00000533149 HSD17B11Q8NBQ5 300 aa8.6□□□□□ -1.03
TRAPPC4-213ENST00000533149 ZNF680Q8NEM1 530 aa8.6□□□□□ -1.03
TRAPPC4-213ENST00000533149 FANCD2OSQ96PS1 177 aa8.6□□□□□ -1.03
TRAPPC4-213ENST00000533149 WDR61Q9GZS3 305 aaKnown RBP8.6□□□□□ -1.03
TRAPPC4-213ENST00000533149 TUBA4BQ9H853 241 aa8.6□□□□□ -1.03
TRAPPC4-213ENST00000533149 GNB4Q9HAV0 340 aa8.6□□□□□ -1.03
TRAPPC4-213ENST00000533149 FRAS1Q86XX4 4008 aa8.6□□□□□ -1.03
TRAPPC4-213ENST00000533149 IGLV11-55A0A075B6I3 123 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 IGHV3-21A0A0B4J1V1 117 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 UBE2L5PA0A1B0GUS4 154 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 RPS10-NUDT3A0A1W2PQS6 291 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 FNDC10F2Z333 226 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms