RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 IGHV7-4-1A0A0J9YVY3 117 aa14.93□□□□□ -0.02
CPSF1-209ENST00000532725 RAB11AP62491 216 aa14.93□□□□□ -0.02
CPSF1-209ENST00000532725 RPP30P78346 268 aaKnown RBP14.93□□□□□ -0.02
CPSF1-209ENST00000532725 SLC16A13Q7RTY0 426 aa14.93□□□□□ -0.02
CPSF1-209ENST00000532725 OR1S2Q8NGQ3 325 aa14.93□□□□□ -0.02
CPSF1-209ENST00000532725 GSKIPQ9P0R6 139 aa14.93□□□□□ -0.02
CPSF1-209ENST00000532725 CCSO14618 274 aa14.92□□□□□ -0.02
CPSF1-209ENST00000532725 CHEK1O14757 476 aa14.92□□□□□ -0.02
CPSF1-209ENST00000532725 OR10J1P30954 320 aa14.92□□□□□ -0.02
CPSF1-209ENST00000532725 DEFA1P59665 94 aa14.92□□□□□ -0.02
CPSF1-209ENST00000532725 DEFA3P59666 94 aa14.92□□□□□ -0.02
CPSF1-209ENST00000532725 YPEL3P61236 119 aaPredicted RBP14.92□□□□□ -0.02
CPSF1-209ENST00000532725 GAMTQ14353 236 aa14.92□□□□□ -0.02
CPSF1-209ENST00000532725 GUCA2BQ16661 112 aa14.92□□□□□ -0.02
CPSF1-209ENST00000532725 ACY3Q96HD9 319 aa14.92□□□□□ -0.02
CPSF1-209ENST00000532725 RHPN1-AS1Q9BWJ2 59 aa14.92□□□□□ -0.02
CPSF1-209ENST00000532725 A8MZ25 164 aa14.91□□□□□ -0.02
CPSF1-209ENST00000532725 PRSS46E5RG02 174 aa14.91□□□□□ -0.02
CPSF1-209ENST00000532725 SCGB2A1O75556 95 aa14.91□□□□□ -0.02
CPSF1-209ENST00000532725 SCAF4O95104 1147 aaKnown RBP14.91□□□□□ -0.02
CPSF1-209ENST00000532725 PAX9P55771 341 aa14.91□□□□□ -0.02
CPSF1-209ENST00000532725 SPANXN5Q5MJ07 72 aa14.91□□□□□ -0.02
CPSF1-209ENST00000532725 GTSCR1Q86UQ5 136 aa14.91□□□□□ -0.02
CPSF1-209ENST00000532725 SMIM8Q96KF7 97 aa14.91□□□□□ -0.02
CPSF1-209ENST00000532725 GINS3Q9BRX5 216 aa14.91□□□□□ -0.02
CPSF1-209ENST00000532725 MARVELD1Q9BSK0 173 aa14.91□□□□□ -0.02
CPSF1-209ENST00000532725 INMT-MINDY4F8WBC2 141 aa14.9□□□□□ -0.02
CPSF1-209ENST00000532725 MBPP02686 304 aaPredicted RBP14.9□□□□□ -0.02
CPSF1-209ENST00000532725 CD7P09564 240 aa14.9□□□□□ -0.02
CPSF1-209ENST00000532725 IGHV4-30-4P0DP06 118 aa14.9□□□□□ -0.02
CPSF1-209ENST00000532725 RBPMS2Q6ZRY4 209 aaKnown RBP14.9□□□□□ -0.02
CPSF1-209ENST00000532725 RNF2Q99496 336 aa14.9□□□□□ -0.02
CPSF1-209ENST00000532725 C19orf73Q9NVV2 129 aa14.9□□□□□ -0.02
CPSF1-209ENST00000532725 PSENENQ9NZ42 101 aa14.9□□□□□ -0.02
CPSF1-209ENST00000532725 PAIP2BQ9ULR5 123 aaKnown RBP14.9□□□□□ -0.02
CPSF1-209ENST00000532725 STRAPQ9Y3F4 350 aaKnown RBP14.9□□□□□ -0.02
CPSF1-209ENST00000532725 COL7A1Q02388 2944 aa14.9□□□□□ -0.02
CPSF1-209ENST00000532725 IGHV3-49A0A0A0MS15 119 aa14.89□□□□□ -0.03
CPSF1-209ENST00000532725 FAM25EA8MYX2 175 aa14.89□□□□□ -0.03
CPSF1-209ENST00000532725 TSPAN4O14817 238 aa14.89□□□□□ -0.03
CPSF1-209ENST00000532725 SSSCA1O60232 199 aa14.89□□□□□ -0.03
CPSF1-209ENST00000532725 APOHP02749 345 aaPredicted RBP14.89□□□□□ -0.03
CPSF1-209ENST00000532725 FRMD6-AS1P0C7T7 363 aa14.89□□□□□ -0.03
CPSF1-209ENST00000532725 LAMTOR1Q6IAA8 161 aa14.89□□□□□ -0.03
CPSF1-209ENST00000532725 LILRB2Q8N423 598 aa14.89□□□□□ -0.03
CPSF1-209ENST00000532725 Q8WTZ3 238 aa14.89□□□□□ -0.03
CPSF1-209ENST00000532725 C2orf50Q96LR7 162 aa14.89□□□□□ -0.03
CPSF1-209ENST00000532725 NEURL2Q9BR09 285 aa14.89□□□□□ -0.03
CPSF1-209ENST00000532725 VSIRQ9H7M9 311 aa14.89□□□□□ -0.03
CPSF1-209ENST00000532725 IGKV1D-37A0A075B6S9 117 aa14.88□□□□□ -0.03
CPSF1-209ENST00000532725 IGHV3OR16-13A0A075B7E8 117 aa14.88□□□□□ -0.03
CPSF1-209ENST00000532725 IGHV3-74A0A0B4J1X5 117 aa14.88□□□□□ -0.03
CPSF1-209ENST00000532725 C5orf51A6NDU8 294 aa14.88□□□□□ -0.03
CPSF1-209ENST00000532725 PMS2P5A8MQ11 134 aa14.88□□□□□ -0.03
CPSF1-209ENST00000532725 SNRPGP15A8MWD9 76 aa14.88□□□□□ -0.03
CPSF1-209ENST00000532725 H3BP45 60 aa14.88□□□□□ -0.03
CPSF1-209ENST00000532725 SCGB1D2O95969 90 aa14.88□□□□□ -0.03
CPSF1-209ENST00000532725 CD81P60033 236 aa14.88□□□□□ -0.03
CPSF1-209ENST00000532725 IL15RAQ13261 267 aa14.88□□□□□ -0.03
CPSF1-209ENST00000532725 FAM90A2PQ658T7 463 aa14.88□□□□□ -0.03
CPSF1-209ENST00000532725 SLC35E1Q96K37 410 aa14.88□□□□□ -0.03
CPSF1-209ENST00000532725 RAB40CQ96S21 281 aa14.88□□□□□ -0.03
CPSF1-209ENST00000532725 GPN1Q9HCN4 374 aaPredicted RBP14.88□□□□□ -0.03
CPSF1-209ENST00000532725 RCL1Q9Y2P8 373 aaKnown RBP14.88□□□□□ -0.03
CPSF1-209ENST00000532725 PRAF2O60831 178 aa14.87□□□□□ -0.03
CPSF1-209ENST00000532725 TOMM40O96008 361 aa14.87□□□□□ -0.03
CPSF1-209ENST00000532725 RD3LP0DJH9 198 aa14.87□□□□□ -0.03
CPSF1-209ENST00000532725 NPPCP23582 126 aa14.87□□□□□ -0.03
CPSF1-209ENST00000532725 CRYBB3P26998 211 aa14.87□□□□□ -0.03
CPSF1-209ENST00000532725 TAS2R30P59541 319 aa14.87□□□□□ -0.03
CPSF1-209ENST00000532725 ST8SIA2Q92186 375 aa14.87□□□□□ -0.03
CPSF1-209ENST00000532725 ASCL2Q99929 193 aa14.87□□□□□ -0.03
CPSF1-209ENST00000532725 SPAG8Q99932 426 aaPredicted RBP14.87□□□□□ -0.03
CPSF1-209ENST00000532725 C7orf66A4D0T2 115 aa14.86□□□□□ -0.03
CPSF1-209ENST00000532725 NHLRC4P0CG21 123 aaPredicted RBP14.86□□□□□ -0.03
CPSF1-209ENST00000532725 PSG1P11464 419 aa14.86□□□□□ -0.03
CPSF1-209ENST00000532725 TMEM14EPQ6UXP3 125 aa14.86□□□□□ -0.03
CPSF1-209ENST00000532725 SBSPONQ8IVN8 264 aa14.86□□□□□ -0.03
CPSF1-209ENST00000532725 U3KQE9 123 aa14.86□□□□□ -0.03
CPSF1-209ENST00000532725 IGKV1OR2-108A0A075B7D4 117 aa14.85□□□□□ -0.03
CPSF1-209ENST00000532725 OR11H12B2RN74 326 aa14.85□□□□□ -0.03
CPSF1-209ENST00000532725 TSC22D2O75157 780 aa14.85□□□□□ -0.03
CPSF1-209ENST00000532725 ZNF90Q03938 601 aa14.85□□□□□ -0.03
CPSF1-209ENST00000532725 GSG1LQ6UXU4 331 aa14.85□□□□□ -0.03
CPSF1-209ENST00000532725 THAP8Q8NA92 274 aa14.85□□□□□ -0.03
CPSF1-209ENST00000532725 METTL26Q96S19 204 aa14.85□□□□□ -0.03
CPSF1-209ENST00000532725 IGHV3-66A0A0C4DH42 116 aa14.84□□□□□ -0.03
CPSF1-209ENST00000532725 ZFP92A6NM28 416 aa14.84□□□□□ -0.03
CPSF1-209ENST00000532725 K7EPK0 472 aa14.84□□□□□ -0.03
CPSF1-209ENST00000532725 BMI1P35226 326 aa14.84□□□□□ -0.03
CPSF1-209ENST00000532725 DEFB125Q8N687 156 aa14.84□□□□□ -0.03
CPSF1-209ENST00000532725 TRGV9Q99603 122 aa14.84□□□□□ -0.03
CPSF1-209ENST00000532725 C11orf1Q9H5F2 150 aa14.84□□□□□ -0.03
CPSF1-209ENST00000532725 A0A1W2PS18 150 aa14.83□□□□□ -0.04
CPSF1-209ENST00000532725 CCNKO75909 580 aa14.83□□□□□ -0.04
CPSF1-209ENST00000532725 DFFBO76075 338 aa14.83□□□□□ -0.04
CPSF1-209ENST00000532725 IL4P05112 153 aa14.83□□□□□ -0.04
CPSF1-209ENST00000532725 CD5P06127 495 aa14.83□□□□□ -0.04
CPSF1-209ENST00000532725 USF2Q15853 346 aaPredicted RBP14.83□□□□□ -0.04
CPSF1-209ENST00000532725 LINC00322Q6ZN03 302 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms