RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 NPY1RP25929 384 aa14.06□□□□□ -0.16
GMDS-208ENST00000530927 ELLP55199 621 aaPredicted RBP14.06□□□□□ -0.16
GMDS-208ENST00000530927 RRAS2P62070 204 aaPredicted RBP14.06□□□□□ -0.16
GMDS-208ENST00000530927 GTSCR1Q86UQ5 136 aa14.06□□□□□ -0.16
GMDS-208ENST00000530927 C2orf50Q96LR7 162 aa14.06□□□□□ -0.16
GMDS-208ENST00000530927 MAGT1Q9H0U3 335 aa14.06□□□□□ -0.16
GMDS-208ENST00000530927 MRPL27Q9P0M9 148 aaKnown RBP14.06□□□□□ -0.16
GMDS-208ENST00000530927 MGAT4CQ9UBM8 478 aa14.06□□□□□ -0.16
GMDS-208ENST00000530927 FAM90A26D6RGX4 464 aa14.05□□□□□ -0.16
GMDS-208ENST00000530927 CORTO00230 105 aa14.05□□□□□ -0.16
GMDS-208ENST00000530927 RELQ04864 619 aaPredicted RBP14.05□□□□□ -0.16
GMDS-208ENST00000530927 TOMM20LQ6UXN7 152 aa14.05□□□□□ -0.16
GMDS-208ENST00000530927 ST6GAL2Q96JF0 529 aa14.05□□□□□ -0.16
GMDS-208ENST00000530927 HIPK2Q9H2X6 1198 aa14.05□□□□□ -0.16
GMDS-208ENST00000530927 C19orf73Q9NVV2 129 aa14.05□□□□□ -0.16
GMDS-208ENST00000530927 GAR1Q9NY12 217 aaKnown RBP14.05□□□□□ -0.16
GMDS-208ENST00000530927 GSKIPQ9P0R6 139 aa14.05□□□□□ -0.16
GMDS-208ENST00000530927 IFNA10P01566 189 aa14.04□□□□□ -0.16
GMDS-208ENST00000530927 APOHP02749 345 aaPredicted RBP14.04□□□□□ -0.16
GMDS-208ENST00000530927 NPBWR1P48145 328 aa14.04□□□□□ -0.16
GMDS-208ENST00000530927 FCN2Q15485 313 aa14.04□□□□□ -0.16
GMDS-208ENST00000530927 TIGITQ495A1 244 aa14.04□□□□□ -0.16
GMDS-208ENST00000530927 PRSS54Q6PEW0 395 aa14.04□□□□□ -0.16
GMDS-208ENST00000530927 TCTE3Q8IZS6 198 aa14.04□□□□□ -0.16
GMDS-208ENST00000530927 DEFB125Q8N687 156 aa14.04□□□□□ -0.16
GMDS-208ENST00000530927 OR4X1Q8NH49 305 aa14.04□□□□□ -0.16
GMDS-208ENST00000530927 MARC2Q969Z3 335 aa14.04□□□□□ -0.16
GMDS-208ENST00000530927 PUS1Q9Y606 427 aaKnown RBP eCLIP14.04□□□□□ -0.16
GMDS-208ENST00000530927 C15orf62A8K5M9 175 aa14.03□□□□□ -0.16
GMDS-208ENST00000530927 RGS13O14921 159 aa14.03□□□□□ -0.16
GMDS-208ENST00000530927 CLN5O75503 358 aa14.03□□□□□ -0.16
GMDS-208ENST00000530927 SIX6O95475 246 aa14.03□□□□□ -0.16
GMDS-208ENST00000530927 RND2P52198 227 aa14.03□□□□□ -0.16
GMDS-208ENST00000530927 CYCSP99999 105 aaKnown RBP14.03□□□□□ -0.16
GMDS-208ENST00000530927 ZFP69Q49AA0 526 aa14.03□□□□□ -0.16
GMDS-208ENST00000530927 OR4D5Q8NGN0 318 aa14.03□□□□□ -0.16
GMDS-208ENST00000530927 ZFAND3Q9H8U3 227 aa14.03□□□□□ -0.16
GMDS-208ENST00000530927 IGHV3-66A0A0C4DH42 116 aa14.02□□□□□ -0.16
GMDS-208ENST00000530927 IGHV7-4-1A0A0J9YVY3 117 aa14.02□□□□□ -0.16
GMDS-208ENST00000530927 K7EMT4 169 aa14.02□□□□□ -0.16
GMDS-208ENST00000530927 MED6O75586 246 aa14.02□□□□□ -0.16
GMDS-208ENST00000530927 IGKV1-17P01599 117 aa14.02□□□□□ -0.16
GMDS-208ENST00000530927 NKX2-1P43699 371 aaPredicted RBP14.02□□□□□ -0.16
GMDS-208ENST00000530927 H2BFSP57053 126 aa14.02□□□□□ -0.16
GMDS-208ENST00000530927 ID3Q02535 119 aa14.02□□□□□ -0.16
GMDS-208ENST00000530927 NDUFA5Q16718 116 aa14.02□□□□□ -0.16
GMDS-208ENST00000530927 OR11H7Q8NGC8 314 aa14.02□□□□□ -0.16
GMDS-208ENST00000530927 RNF2Q99496 336 aa14.02□□□□□ -0.16
GMDS-208ENST00000530927 NMES1Q9C002 83 aa14.02□□□□□ -0.16
GMDS-208ENST00000530927 SMPXQ9UHP9 88 aa14.02□□□□□ -0.16
GMDS-208ENST00000530927 CHEK1O14757 476 aa14.01□□□□□ -0.17
GMDS-208ENST00000530927 CXCL3P19876 107 aa14.01□□□□□ -0.17
GMDS-208ENST00000530927 ZNF600Q6ZNG1 722 aa14.01□□□□□ -0.17
GMDS-208ENST00000530927 RBPMS2Q6ZRY4 209 aaKnown RBP14.01□□□□□ -0.17
GMDS-208ENST00000530927 LILRB2Q8N423 598 aa14.01□□□□□ -0.17
GMDS-208ENST00000530927 TMEM116Q8NCL8 245 aa14.01□□□□□ -0.17
GMDS-208ENST00000530927 RNASEH2CQ8TDP1 164 aaKnown RBP14.01□□□□□ -0.17
GMDS-208ENST00000530927 ACY3Q96HD9 319 aa14.01□□□□□ -0.17
GMDS-208ENST00000530927 RHPN1-AS1Q9BWJ2 59 aa14.01□□□□□ -0.17
GMDS-208ENST00000530927 OR11H12B2RN74 326 aa14□□□□□ -0.17
GMDS-208ENST00000530927 ATP6V1G1O75348 118 aa14□□□□□ -0.17
GMDS-208ENST00000530927 IGLC1P0CG04 106 aa14□□□□□ -0.17
GMDS-208ENST00000530927 IL15RAQ13261 267 aa14□□□□□ -0.17
GMDS-208ENST00000530927 NPIPB3Q92617 1050 aa14□□□□□ -0.17
GMDS-208ENST00000530927 TUBA4BQ9H853 241 aa14□□□□□ -0.17
GMDS-208ENST00000530927 U3KQ87 197 aa14□□□□□ -0.17
GMDS-208ENST00000530927 U3KQK5 164 aa14□□□□□ -0.17
GMDS-208ENST00000530927 TENM3Q9P273 2699 aa14□□□□□ -0.17
GMDS-208ENST00000530927 IGKV3-7A0A075B6H7 116 aa13.99□□□□□ -0.17
GMDS-208ENST00000530927 TRAV14DV4A0A0A6YYC5 116 aa13.99□□□□□ -0.17
GMDS-208ENST00000530927 RPS10-NUDT3A0A1W2PQS6 291 aa13.99□□□□□ -0.17
GMDS-208ENST00000530927 RBMY1BA6NDE4 496 aaKnown RBP13.99□□□□□ -0.17
GMDS-208ENST00000530927 RBMY1EA6NEQ0 496 aaKnown RBP13.99□□□□□ -0.17
GMDS-208ENST00000530927 A8MZ25 164 aa13.99□□□□□ -0.17
GMDS-208ENST00000530927 WRBO00258 174 aa13.99□□□□□ -0.17
GMDS-208ENST00000530927 SYNGR2O43760 224 aa13.99□□□□□ -0.17
GMDS-208ENST00000530927 SCGB1D2O95969 90 aa13.99□□□□□ -0.17
GMDS-208ENST00000530927 RBMY1DP0C7P1 496 aaKnown RBP13.99□□□□□ -0.17
GMDS-208ENST00000530927 NHLRC4P0CG21 123 aaPredicted RBP13.99□□□□□ -0.17
GMDS-208ENST00000530927 SLC16A13Q7RTY0 426 aa13.99□□□□□ -0.17
GMDS-208ENST00000530927 ASB13Q8WXK3 278 aa13.99□□□□□ -0.17
GMDS-208ENST00000530927 ST8SIA2Q92186 375 aa13.99□□□□□ -0.17
GMDS-208ENST00000530927 UBQLN2Q9UHD9 624 aa13.99□□□□□ -0.17
GMDS-208ENST00000530927 H3BP45 60 aa13.98□□□□□ -0.17
GMDS-208ENST00000530927 MBPP02686 304 aaPredicted RBP13.98□□□□□ -0.17
GMDS-208ENST00000530927 IFNA4P05014 189 aa13.98□□□□□ -0.17
GMDS-208ENST00000530927 OR10J1P30954 320 aa13.98□□□□□ -0.17
GMDS-208ENST00000530927 SRD5A3Q9H8P0 318 aa13.98□□□□□ -0.17
GMDS-208ENST00000530927 TRAV25A0A0B4J276 109 aa13.98□□□□□ -0.17
GMDS-208ENST00000530927 SLC25A4P12235 298 aa13.98□□□□□ -0.17
GMDS-208ENST00000530927 TFPI2P48307 235 aa13.98□□□□□ -0.17
GMDS-208ENST00000530927 POLR2GP62487 172 aaKnown RBP eCLIP13.98□□□□□ -0.17
GMDS-208ENST00000530927 HAGHQ16775 308 aa13.98□□□□□ -0.17
GMDS-208ENST00000530927 NOXA1Q86UR1 476 aa13.98□□□□□ -0.17
GMDS-208ENST00000530927 CIB3Q96Q77 187 aaPredicted RBP13.98□□□□□ -0.17
GMDS-208ENST00000530927 CITED4Q96RK1 184 aa13.98□□□□□ -0.17
GMDS-208ENST00000530927 TSPAN4O14817 238 aa13.97□□□□□ -0.17
GMDS-208ENST00000530927 GIPP09681 153 aaPredicted RBP13.97□□□□□ -0.17
GMDS-208ENST00000530927 GBGT1Q8N5D6 347 aa13.97□□□□□ -0.17
GMDS-208ENST00000530927 RAB40CQ96S21 281 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms