RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 RPP21Q9H633 154 aaKnown RBP6.61□□□□□ -1.35
CSDE1-214ENST00000530886 AP5S1Q9NUS5 200 aa6.61□□□□□ -1.35
CSDE1-214ENST00000530886 TCRBV4S1A1TA0A5B7 111 aa6.61□□□□□ -1.35
CSDE1-214ENST00000530886 APOHP02749 345 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-214ENST00000530886 Q6AWC8 147 aa6.61□□□□□ -1.35
CSDE1-214ENST00000530886 SYT8Q8NBV8 401 aa6.61□□□□□ -1.35
CSDE1-214ENST00000530886 PLPPR2Q96GM1 343 aa6.61□□□□□ -1.35
CSDE1-214ENST00000530886 HSD17B10Q99714 261 aaKnown RBP6.61□□□□□ -1.35
CSDE1-214ENST00000530886 KLF12Q9Y4X4 402 aa6.61□□□□□ -1.35
CSDE1-214ENST00000530886 SP1P08047 785 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 NHLRC4P0CG21 123 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-214ENST00000530886 SRD5A1P18405 259 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 INSL3P51460 131 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 XGP55808 180 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 RBPMS2Q6ZRY4 209 aaKnown RBP6.6□□□□□ -1.35
CSDE1-214ENST00000530886 BCL6BQ8N143 479 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-214ENST00000530886 OR13H1Q8NG92 308 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 RNF208Q9H0X6 261 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 PLEKHA3Q9HB20 300 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 CFAP47Q6ZTR5 3102 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 C19orf71A6NCJ1 209 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 APOMO95445 188 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 IGHV4-34P06331 123 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 TNFRSF4P43489 277 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 ZNF562Q6V9R5 426 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 CEND1Q8N111 149 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 NANOS1Q8WY41 292 aaKnown RBP6.6□□□□□ -1.35
CSDE1-214ENST00000530886 CITED1Q99966 193 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 NABP2Q9BQ15 211 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 MLST8Q9BVC4 326 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 MRPS17Q9Y2R5 130 aaKnown RBP6.6□□□□□ -1.35
CSDE1-214ENST00000530886 A0A096LNJ9 63 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 A0A1B0GWB2 263 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 C8orf88P0DMB2 117 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 GFERP55789 205 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 TRAT1Q6PIZ9 186 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 PIP4P1Q86T03 277 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 Q8TCH9 128 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 KLRF1Q9NZS2 232 aa6.6□□□□□ -1.35
CSDE1-214ENST00000530886 AMMECR1Q9Y4X0 333 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-214ENST00000530886 SMG1Q96Q15 3661 aaKnown RBP6.6□□□□□ -1.35
CSDE1-214ENST00000530886 NPIPB6E9PJ23 425 aa6.59□□□□□ -1.35
CSDE1-214ENST00000530886 C3orf80F5H4A9 247 aa6.59□□□□□ -1.35
CSDE1-214ENST00000530886 OVOL3O00110 214 aa6.59□□□□□ -1.35
CSDE1-214ENST00000530886 PEX7O00628 323 aa6.59□□□□□ -1.35
CSDE1-214ENST00000530886 SPINK9Q5DT21 86 aa6.59□□□□□ -1.35
CSDE1-214ENST00000530886 ZNF329Q86UD4 541 aa6.59□□□□□ -1.35
CSDE1-214ENST00000530886 MED12LQ86YW9 2145 aa6.59□□□□□ -1.35
CSDE1-214ENST00000530886 FGFBP3Q8TAT2 258 aa6.59□□□□□ -1.35
CSDE1-214ENST00000530886 SPXQ9BT56 116 aa6.59□□□□□ -1.35
CSDE1-214ENST00000530886 POLDIP2Q9Y2S7 368 aa6.59□□□□□ -1.35
CSDE1-214ENST00000530886 UFC1Q9Y3C8 167 aa6.59□□□□□ -1.35
CSDE1-214ENST00000530886 DIDO1Q9BTC0 2240 aaKnown RBP6.59□□□□□ -1.35
CSDE1-214ENST00000530886 A0A087WX48 190 aa6.59□□□□□ -1.35
CSDE1-214ENST00000530886 SPTY2D1-AS1A0A0U1RR47 76 aa6.59□□□□□ -1.35
CSDE1-214ENST00000530886 DNPH1O43598 174 aa6.59□□□□□ -1.35
CSDE1-214ENST00000530886 MYCNOSP40205 109 aa6.59□□□□□ -1.35
CSDE1-214ENST00000530886 SRYQ05066 204 aa6.59□□□□□ -1.35
CSDE1-214ENST00000530886 SLC25A33Q9BSK2 321 aa6.59□□□□□ -1.35
CSDE1-214ENST00000530886 ZMAT4Q9H898 229 aa6.59□□□□□ -1.35
CSDE1-214ENST00000530886 A0A1B0GW15 77 aa6.59□□□□□ -1.36
CSDE1-214ENST00000530886 B5MCH6 92 aa6.59□□□□□ -1.36
CSDE1-214ENST00000530886 LINC01619G3V211 115 aa6.59□□□□□ -1.36
CSDE1-214ENST00000530886 DLL1O00548 723 aa6.59□□□□□ -1.36
CSDE1-214ENST00000530886 CA6P23280 308 aa6.59□□□□□ -1.36
CSDE1-214ENST00000530886 FHL3Q13643 280 aa6.59□□□□□ -1.36
CSDE1-214ENST00000530886 ZFAND6Q6FIF0 208 aa6.59□□□□□ -1.36
CSDE1-214ENST00000530886 PCP2Q8IVA1 136 aa6.59□□□□□ -1.36
CSDE1-214ENST00000530886 OSR1Q8TAX0 266 aaPredicted RBP6.59□□□□□ -1.36
CSDE1-214ENST00000530886 FAM167A-AS1Q96KT0 104 aa6.59□□□□□ -1.36
CSDE1-214ENST00000530886 CHAC1Q9BUX1 264 aa6.59□□□□□ -1.36
CSDE1-214ENST00000530886 RALYQ9UKM9 306 aaKnown RBP6.59□□□□□ -1.36
CSDE1-214ENST00000530886 ZFHX4Q86UP3 3567 aa6.59□□□□□ -1.36
CSDE1-214ENST00000530886 USF3Q68DE3 2245 aa6.59□□□□□ -1.36
CSDE1-214ENST00000530886 CENPVL3A0A0U1RRI6 287 aa6.58□□□□□ -1.36
CSDE1-214ENST00000530886 ARL3P36405 182 aa6.58□□□□□ -1.36
CSDE1-214ENST00000530886 MPV17P39210 176 aa6.58□□□□□ -1.36
CSDE1-214ENST00000530886 CFHR1Q03591 330 aa6.58□□□□□ -1.36
CSDE1-214ENST00000530886 PAX8Q06710 450 aa6.58□□□□□ -1.36
CSDE1-214ENST00000530886 CFAP126Q5VTH2 177 aa6.58□□□□□ -1.36
CSDE1-214ENST00000530886 MOGAT3Q86VF5 341 aa6.58□□□□□ -1.36
CSDE1-214ENST00000530886 IGLV3-12A0A075B6K2 115 aa6.58□□□□□ -1.36
CSDE1-214ENST00000530886 GCSHP23434 173 aa6.58□□□□□ -1.36
CSDE1-214ENST00000530886 LINC00696Q6ZRV3 163 aa6.58□□□□□ -1.36
CSDE1-214ENST00000530886 RND1Q92730 232 aa6.58□□□□□ -1.36
CSDE1-214ENST00000530886 SLC25A2Q9BXI2 301 aa6.58□□□□□ -1.36
CSDE1-214ENST00000530886 GCM1Q9NP62 436 aa6.58□□□□□ -1.36
CSDE1-214ENST00000530886 B4GALT7Q9UBV7 327 aa6.58□□□□□ -1.36
CSDE1-214ENST00000530886 SEC16AO15027 2179 aa6.58□□□□□ -1.36
CSDE1-214ENST00000530886 FBLL1A6NHQ2 334 aaKnown RBP6.57□□□□□ -1.36
CSDE1-214ENST00000530886 LILRA5A6NI73 299 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 RHODO00212 210 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 CHEK1O14757 476 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 ATP5IP56385 69 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-214ENST00000530886 RRN3P1Q2M238 152 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 Q6Q795 121 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 Q8IYB0 196 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 CFHR5Q9BXR6 569 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 PROK2Q9HC23 129 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 YAE1D1Q9NRH1 226 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms