RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 SLC16A13Q7RTY0 426 aa9.53□□□□□ -0.88
CCDC90B-216ENST00000529856 GTSCR1Q86UQ5 136 aa9.53□□□□□ -0.88
CCDC90B-216ENST00000529856 OR1S2Q8NGQ3 325 aa9.53□□□□□ -0.88
CCDC90B-216ENST00000529856 ENKURQ8TC29 256 aa9.53□□□□□ -0.88
CCDC90B-216ENST00000529856 NPIPB3Q92617 1050 aa9.53□□□□□ -0.88
CCDC90B-216ENST00000529856 ZFAND3Q9H8U3 227 aa9.53□□□□□ -0.88
CCDC90B-216ENST00000529856 PUS1Q9Y606 427 aaKnown RBP eCLIP9.53□□□□□ -0.88
CCDC90B-216ENST00000529856 A8MZ25 164 aa9.52□□□□□ -0.89
CCDC90B-216ENST00000529856 CHEK1O14757 476 aa9.52□□□□□ -0.89
CCDC90B-216ENST00000529856 IL5P05113 134 aa9.52□□□□□ -0.89
CCDC90B-216ENST00000529856 IGLC1P0CG04 106 aa9.52□□□□□ -0.89
CCDC90B-216ENST00000529856 IGHV4-30-4P0DP06 118 aa9.52□□□□□ -0.89
CCDC90B-216ENST00000529856 OR10J1P30954 320 aa9.52□□□□□ -0.89
CCDC90B-216ENST00000529856 NKX2-1P43699 371 aaPredicted RBP9.52□□□□□ -0.89
CCDC90B-216ENST00000529856 YPEL3P61236 119 aaPredicted RBP9.52□□□□□ -0.89
CCDC90B-216ENST00000529856 POLR2GP62487 172 aaKnown RBP eCLIP9.52□□□□□ -0.89
CCDC90B-216ENST00000529856 RBPMS2Q6ZRY4 209 aaKnown RBP9.52□□□□□ -0.89
CCDC90B-216ENST00000529856 C12orf45Q8N5I9 185 aaPredicted RBP9.52□□□□□ -0.89
CCDC90B-216ENST00000529856 ZBTB8BQ8NAP8 495 aaPredicted RBP9.52□□□□□ -0.89
CCDC90B-216ENST00000529856 NEURL2Q9BR09 285 aa9.52□□□□□ -0.89
CCDC90B-216ENST00000529856 GINS3Q9BRX5 216 aa9.52□□□□□ -0.89
CCDC90B-216ENST00000529856 RHPN1-AS1Q9BWJ2 59 aa9.52□□□□□ -0.89
CCDC90B-216ENST00000529856 C19orf73Q9NVV2 129 aa9.52□□□□□ -0.89
CCDC90B-216ENST00000529856 TSPAN4O14817 238 aa9.51□□□□□ -0.89
CCDC90B-216ENST00000529856 SCAF4O95104 1147 aaKnown RBP9.51□□□□□ -0.89
CCDC90B-216ENST00000529856 CD7P09564 240 aa9.51□□□□□ -0.89
CCDC90B-216ENST00000529856 FRMD6-AS1P0C7T7 363 aa9.51□□□□□ -0.89
CCDC90B-216ENST00000529856 NHLRC4P0CG21 123 aaPredicted RBP9.51□□□□□ -0.89
CCDC90B-216ENST00000529856 CD81P60033 236 aa9.51□□□□□ -0.89
CCDC90B-216ENST00000529856 GAMTQ14353 236 aa9.51□□□□□ -0.89
CCDC90B-216ENST00000529856 SPANXN5Q5MJ07 72 aa9.51□□□□□ -0.89
CCDC90B-216ENST00000529856 LAMTOR1Q6IAA8 161 aa9.51□□□□□ -0.89
CCDC90B-216ENST00000529856 NRARPQ7Z6K4 114 aa9.51□□□□□ -0.89
CCDC90B-216ENST00000529856 ACY3Q96HD9 319 aa9.51□□□□□ -0.89
CCDC90B-216ENST00000529856 SMIM8Q96KF7 97 aa9.51□□□□□ -0.89
CCDC90B-216ENST00000529856 GSKIPQ9P0R6 139 aa9.51□□□□□ -0.89
CCDC90B-216ENST00000529856 PAIP2BQ9ULR5 123 aaKnown RBP9.51□□□□□ -0.89
CCDC90B-216ENST00000529856 COL7A1Q02388 2944 aa9.51□□□□□ -0.89
CCDC90B-216ENST00000529856 IGHV3-49A0A0A0MS15 119 aa9.5□□□□□ -0.89
CCDC90B-216ENST00000529856 PRSS46E5RG02 174 aa9.5□□□□□ -0.89
CCDC90B-216ENST00000529856 CCSO14618 274 aa9.5□□□□□ -0.89
CCDC90B-216ENST00000529856 DEFA1P59665 94 aa9.5□□□□□ -0.89
CCDC90B-216ENST00000529856 DEFA3P59666 94 aa9.5□□□□□ -0.89
CCDC90B-216ENST00000529856 Q8WTZ3 238 aa9.5□□□□□ -0.89
CCDC90B-216ENST00000529856 RNF2Q99496 336 aa9.5□□□□□ -0.89
CCDC90B-216ENST00000529856 ASCL2Q99929 193 aa9.5□□□□□ -0.89
CCDC90B-216ENST00000529856 SPAG8Q99932 426 aaPredicted RBP9.5□□□□□ -0.89
CCDC90B-216ENST00000529856 PSENENQ9NZ42 101 aa9.5□□□□□ -0.89
CCDC90B-216ENST00000529856 STRAPQ9Y3F4 350 aaKnown RBP9.5□□□□□ -0.89
CCDC90B-216ENST00000529856 IGHV3OR16-13A0A075B7E8 117 aa9.49□□□□□ -0.89
CCDC90B-216ENST00000529856 IGHV3-74A0A0B4J1X5 117 aa9.49□□□□□ -0.89
CCDC90B-216ENST00000529856 H3BP45 60 aa9.49□□□□□ -0.89
CCDC90B-216ENST00000529856 SSSCA1O60232 199 aa9.49□□□□□ -0.89
CCDC90B-216ENST00000529856 MBPP02686 304 aaPredicted RBP9.49□□□□□ -0.89
CCDC90B-216ENST00000529856 APOHP02749 345 aaPredicted RBP9.49□□□□□ -0.89
CCDC90B-216ENST00000529856 NPPCP23582 126 aa9.49□□□□□ -0.89
CCDC90B-216ENST00000529856 PAX9P55771 341 aa9.49□□□□□ -0.89
CCDC90B-216ENST00000529856 FAM90A2PQ658T7 463 aa9.49□□□□□ -0.89
CCDC90B-216ENST00000529856 SBSPONQ8IVN8 264 aa9.49□□□□□ -0.89
CCDC90B-216ENST00000529856 SLC35E1Q96K37 410 aa9.49□□□□□ -0.89
CCDC90B-216ENST00000529856 C2orf50Q96LR7 162 aa9.49□□□□□ -0.89
CCDC90B-216ENST00000529856 RAB40CQ96S21 281 aa9.49□□□□□ -0.89
CCDC90B-216ENST00000529856 VSIRQ9H7M9 311 aa9.49□□□□□ -0.89
CCDC90B-216ENST00000529856 TUBA4BQ9H853 241 aa9.49□□□□□ -0.89
CCDC90B-216ENST00000529856 IGKV1D-37A0A075B6S9 117 aa9.48□□□□□ -0.89
CCDC90B-216ENST00000529856 C5orf51A6NDU8 294 aa9.48□□□□□ -0.89
CCDC90B-216ENST00000529856 FAM25EA8MYX2 175 aa9.48□□□□□ -0.89
CCDC90B-216ENST00000529856 OR11H12B2RN74 326 aa9.48□□□□□ -0.89
CCDC90B-216ENST00000529856 INMT-MINDY4F8WBC2 141 aa9.48□□□□□ -0.89
CCDC90B-216ENST00000529856 LCE2BO14633 110 aa9.48□□□□□ -0.89
CCDC90B-216ENST00000529856 SCGB1D2O95969 90 aa9.48□□□□□ -0.89
CCDC90B-216ENST00000529856 TOMM40O96008 361 aa9.48□□□□□ -0.89
CCDC90B-216ENST00000529856 CD5P06127 495 aa9.48□□□□□ -0.89
CCDC90B-216ENST00000529856 RD3LP0DJH9 198 aa9.48□□□□□ -0.89
CCDC90B-216ENST00000529856 CRYBB3P26998 211 aa9.48□□□□□ -0.89
CCDC90B-216ENST00000529856 BMI1P35226 326 aa9.48□□□□□ -0.89
CCDC90B-216ENST00000529856 TAS2R30P59541 319 aa9.48□□□□□ -0.89
CCDC90B-216ENST00000529856 LILRB2Q8N423 598 aa9.48□□□□□ -0.89
CCDC90B-216ENST00000529856 DEFB125Q8N687 156 aa9.48□□□□□ -0.89
CCDC90B-216ENST00000529856 ST8SIA2Q92186 375 aa9.48□□□□□ -0.89
CCDC90B-216ENST00000529856 METTL26Q96S19 204 aa9.48□□□□□ -0.89
CCDC90B-216ENST00000529856 MARVELD1Q9BSK0 173 aa9.48□□□□□ -0.89
CCDC90B-216ENST00000529856 GPN1Q9HCN4 374 aaPredicted RBP9.48□□□□□ -0.89
CCDC90B-216ENST00000529856 A0A1W2PS18 150 aa9.47□□□□□ -0.89
CCDC90B-216ENST00000529856 ZFP92A6NM28 416 aa9.47□□□□□ -0.89
CCDC90B-216ENST00000529856 PMS2P5A8MQ11 134 aa9.47□□□□□ -0.89
CCDC90B-216ENST00000529856 SNRPGP15A8MWD9 76 aa9.47□□□□□ -0.89
CCDC90B-216ENST00000529856 PRAF2O60831 178 aa9.47□□□□□ -0.89
CCDC90B-216ENST00000529856 PSG1P11464 419 aa9.47□□□□□ -0.89
CCDC90B-216ENST00000529856 TMEM14EPQ6UXP3 125 aa9.47□□□□□ -0.89
CCDC90B-216ENST00000529856 GSG1LQ6UXU4 331 aa9.47□□□□□ -0.89
CCDC90B-216ENST00000529856 TCF24Q7RTU0 167 aa9.47□□□□□ -0.89
CCDC90B-216ENST00000529856 TMEM231Q9H6L2 316 aa9.47□□□□□ -0.89
CCDC90B-216ENST00000529856 RCL1Q9Y2P8 373 aaKnown RBP9.47□□□□□ -0.89
CCDC90B-216ENST00000529856 U3KQE9 123 aa9.47□□□□□ -0.89
CCDC90B-216ENST00000529856 IGKV1OR2-108A0A075B7D4 117 aa9.46□□□□□ -0.9
CCDC90B-216ENST00000529856 IGHV3-66A0A0C4DH42 116 aa9.46□□□□□ -0.9
CCDC90B-216ENST00000529856 C7orf66A4D0T2 115 aa9.46□□□□□ -0.9
CCDC90B-216ENST00000529856 OR4C46A6NHA9 309 aa9.46□□□□□ -0.9
CCDC90B-216ENST00000529856 K7EPK0 472 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms