RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 ZNF600Q6ZNG1 722 aa14.31□□□□□ -0.12
PKP3-204ENST00000526971 SMPXQ9UHP9 88 aa14.31□□□□□ -0.12
PKP3-204ENST00000526971 TRAV6A0A075B6T7 132 aa14.3□□□□□ -0.12
PKP3-204ENST00000526971 TRAV30A0A087WSZ9 112 aa14.3□□□□□ -0.12
PKP3-204ENST00000526971 SCGB2A1O75556 95 aa14.3□□□□□ -0.12
PKP3-204ENST00000526971 UPK1BO75841 260 aa14.3□□□□□ -0.12
PKP3-204ENST00000526971 IFNA21P01568 189 aa14.3□□□□□ -0.12
PKP3-204ENST00000526971 CD81P60033 236 aa14.3□□□□□ -0.12
PKP3-204ENST00000526971 ASAH1Q13510 395 aa14.3□□□□□ -0.12
PKP3-204ENST00000526971 MZT2BQ6NZ67 158 aa14.3□□□□□ -0.12
PKP3-204ENST00000526971 RBPMS2Q6ZRY4 209 aaKnown RBP14.3□□□□□ -0.12
PKP3-204ENST00000526971 TMEM116Q8NCL8 245 aa14.3□□□□□ -0.12
PKP3-204ENST00000526971 OR52B4Q8NGK2 314 aa14.3□□□□□ -0.12
PKP3-204ENST00000526971 MITD1Q8WV92 249 aa14.3□□□□□ -0.12
PKP3-204ENST00000526971 NEURL2Q9BR09 285 aa14.3□□□□□ -0.12
PKP3-204ENST00000526971 NUDT15Q9NV35 164 aa14.3□□□□□ -0.12
PKP3-204ENST00000526971 TRAV14DV4A0A0A6YYC5 116 aa14.29□□□□□ -0.12
PKP3-204ENST00000526971 IGHV7-4-1A0A0J9YVY3 117 aa14.29□□□□□ -0.12
PKP3-204ENST00000526971 FAM240BA0A1B0GVZ2 78 aa14.29□□□□□ -0.12
PKP3-204ENST00000526971 MPTX1A8MV57 137 aa14.29□□□□□ -0.12
PKP3-204ENST00000526971 SYNGR2O43760 224 aa14.29□□□□□ -0.12
PKP3-204ENST00000526971 SCAF4O95104 1147 aaKnown RBP14.29□□□□□ -0.12
PKP3-204ENST00000526971 IGKV1-17P01599 117 aa14.29□□□□□ -0.12
PKP3-204ENST00000526971 IFNA4P05014 189 aa14.29□□□□□ -0.12
PKP3-204ENST00000526971 IAPPP10997 89 aa14.29□□□□□ -0.12
PKP3-204ENST00000526971 RND2P52198 227 aa14.29□□□□□ -0.12
PKP3-204ENST00000526971 CIB3Q96Q77 187 aaPredicted RBP14.29□□□□□ -0.12
PKP3-204ENST00000526971 GINS3Q9BRX5 216 aa14.29□□□□□ -0.12
PKP3-204ENST00000526971 MAGT1Q9H0U3 335 aa14.29□□□□□ -0.12
PKP3-204ENST00000526971 ZFAND3Q9H8U3 227 aa14.29□□□□□ -0.12
PKP3-204ENST00000526971 PUS1Q9Y606 427 aaKnown RBP eCLIP14.29□□□□□ -0.12
PKP3-204ENST00000526971 CD7P09564 240 aa14.28□□□□□ -0.12
PKP3-204ENST00000526971 IGLC1P0CG04 106 aa14.28□□□□□ -0.12
PKP3-204ENST00000526971 ID3Q02535 119 aa14.28□□□□□ -0.12
PKP3-204ENST00000526971 TIGITQ495A1 244 aa14.28□□□□□ -0.12
PKP3-204ENST00000526971 LAMTOR1Q6IAA8 161 aa14.28□□□□□ -0.12
PKP3-204ENST00000526971 SLC16A13Q7RTY0 426 aa14.28□□□□□ -0.12
PKP3-204ENST00000526971 OR1S2Q8NGQ3 325 aa14.28□□□□□ -0.12
PKP3-204ENST00000526971 RHPN1-AS1Q9BWJ2 59 aa14.28□□□□□ -0.12
PKP3-204ENST00000526971 CHEK1O14757 476 aa14.27□□□□□ -0.13
PKP3-204ENST00000526971 TSPAN4O14817 238 aa14.27□□□□□ -0.13
PKP3-204ENST00000526971 H2AFB2P0C5Z0 115 aa14.27□□□□□ -0.13
PKP3-204ENST00000526971 OR10J1P30954 320 aa14.27□□□□□ -0.13
PKP3-204ENST00000526971 GPX4P36969 197 aaPredicted RBP14.27□□□□□ -0.13
PKP3-204ENST00000526971 IFITM3Q01628 133 aa14.27□□□□□ -0.13
PKP3-204ENST00000526971 HAGHQ16775 308 aa14.27□□□□□ -0.13
PKP3-204ENST00000526971 NPIPB3Q92617 1050 aa14.27□□□□□ -0.13
PKP3-204ENST00000526971 SPATA25Q9BR10 227 aa14.27□□□□□ -0.13
PKP3-204ENST00000526971 TUBA4BQ9H853 241 aa14.27□□□□□ -0.13
PKP3-204ENST00000526971 IGHV3-49A0A0A0MS15 119 aa14.26□□□□□ -0.13
PKP3-204ENST00000526971 WRBO00258 174 aa14.26□□□□□ -0.13
PKP3-204ENST00000526971 RAB11AP62491 216 aa14.26□□□□□ -0.13
PKP3-204ENST00000526971 RPP30P78346 268 aaKnown RBP14.26□□□□□ -0.13
PKP3-204ENST00000526971 OR4D5Q8NGN0 318 aa14.26□□□□□ -0.13
PKP3-204ENST00000526971 ZNF431Q8TF32 576 aaPredicted RBP14.26□□□□□ -0.13
PKP3-204ENST00000526971 ACY3Q96HD9 319 aa14.26□□□□□ -0.13
PKP3-204ENST00000526971 SPAG8Q99932 426 aaPredicted RBP14.26□□□□□ -0.13
PKP3-204ENST00000526971 NKX2-1P43699 371 aaPredicted RBP14.25□□□□□ -0.13
PKP3-204ENST00000526971 YPEL3P61236 119 aaPredicted RBP14.25□□□□□ -0.13
PKP3-204ENST00000526971 RNF2Q99496 336 aa14.25□□□□□ -0.13
PKP3-204ENST00000526971 SEC22CQ9BRL7 303 aa14.25□□□□□ -0.13
PKP3-204ENST00000526971 RETNQ9HD89 108 aa14.25□□□□□ -0.13
PKP3-204ENST00000526971 IGHV3OR16-13A0A075B7E8 117 aa14.24□□□□□ -0.13
PKP3-204ENST00000526971 IGHV3-74A0A0B4J1X5 117 aa14.24□□□□□ -0.13
PKP3-204ENST00000526971 OR11H12B2RN74 326 aa14.24□□□□□ -0.13
PKP3-204ENST00000526971 BMI1P35226 326 aa14.24□□□□□ -0.13
PKP3-204ENST00000526971 POLR2GP62487 172 aaKnown RBP eCLIP14.24□□□□□ -0.13
PKP3-204ENST00000526971 IAH1Q2TAA2 248 aaPredicted RBP14.24□□□□□ -0.13
PKP3-204ENST00000526971 DEFB125Q8N687 156 aa14.24□□□□□ -0.13
PKP3-204ENST00000526971 Q8WTZ3 238 aa14.24□□□□□ -0.13
PKP3-204ENST00000526971 VSIRQ9H7M9 311 aa14.24□□□□□ -0.13
PKP3-204ENST00000526971 PAIP2BQ9ULR5 123 aaKnown RBP14.24□□□□□ -0.13
PKP3-204ENST00000526971 APOHP02749 345 aaPredicted RBP14.23□□□□□ -0.13
PKP3-204ENST00000526971 NPPCP23582 126 aa14.23□□□□□ -0.13
PKP3-204ENST00000526971 GAMTQ14353 236 aa14.23□□□□□ -0.13
PKP3-204ENST00000526971 SPANXN5Q5MJ07 72 aa14.23□□□□□ -0.13
PKP3-204ENST00000526971 ZBTB8BQ8NAP8 495 aaPredicted RBP14.23□□□□□ -0.13
PKP3-204ENST00000526971 ENKURQ8TC29 256 aa14.23□□□□□ -0.13
PKP3-204ENST00000526971 SLC35E1Q96K37 410 aa14.23□□□□□ -0.13
PKP3-204ENST00000526971 WFDC10AQ9H1F0 79 aa14.23□□□□□ -0.13
PKP3-204ENST00000526971 FAM90A2PQ658T7 463 aa14.22□□□□□ -0.13
PKP3-204ENST00000526971 LINC00322Q6ZN03 302 aaPredicted RBP14.22□□□□□ -0.13
PKP3-204ENST00000526971 C12orf45Q8N5I9 185 aaPredicted RBP14.22□□□□□ -0.13
PKP3-204ENST00000526971 ST8SIA2Q92186 375 aa14.22□□□□□ -0.13
PKP3-204ENST00000526971 METTL26Q96S19 204 aa14.22□□□□□ -0.13
PKP3-204ENST00000526971 GSKIPQ9P0R6 139 aa14.22□□□□□ -0.13
PKP3-204ENST00000526971 STRAPQ9Y3F4 350 aaKnown RBP14.22□□□□□ -0.13
PKP3-204ENST00000526971 IGHV3-66A0A0C4DH42 116 aa14.21□□□□□ -0.13
PKP3-204ENST00000526971 OR4C46A6NHA9 309 aa14.21□□□□□ -0.13
PKP3-204ENST00000526971 SSSCA1O60232 199 aa14.21□□□□□ -0.13
PKP3-204ENST00000526971 TOMM40O96008 361 aa14.21□□□□□ -0.13
PKP3-204ENST00000526971 IL5P05113 134 aa14.21□□□□□ -0.13
PKP3-204ENST00000526971 CD5P06127 495 aa14.21□□□□□ -0.13
PKP3-204ENST00000526971 RD3LP0DJH9 198 aa14.21□□□□□ -0.13
PKP3-204ENST00000526971 CRYBB3P26998 211 aa14.21□□□□□ -0.13
PKP3-204ENST00000526971 LILRB2Q8N423 598 aa14.21□□□□□ -0.13
PKP3-204ENST00000526971 SMIM8Q96KF7 97 aa14.21□□□□□ -0.13
PKP3-204ENST00000526971 FAM110AQ9BQ89 295 aa14.21□□□□□ -0.13
PKP3-204ENST00000526971 TMEM231Q9H6L2 316 aa14.21□□□□□ -0.13
PKP3-204ENST00000526971 SRD5A3Q9H8P0 318 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms