RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 TMEM208Q9BTX3 173 aa3.61□□□□□ -1.83
SF3B2-205ENST00000526653 SLC35B3Q9H1N7 401 aa3.61□□□□□ -1.83
SF3B2-205ENST00000526653 TMEM231Q9H6L2 316 aa3.61□□□□□ -1.83
SF3B2-205ENST00000526653 FAM212BQ9NTI7 297 aaPredicted RBP3.61□□□□□ -1.83
SF3B2-205ENST00000526653 BET1LQ9NYM9 111 aa3.61□□□□□ -1.83
SF3B2-205ENST00000526653 GOLT1BQ9Y3E0 138 aa3.61□□□□□ -1.83
SF3B2-205ENST00000526653 IGKV1D-8A0A087WSZ0 117 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 TRAV26-1A0A087WT03 109 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 TMEM14DPA8MWL7 114 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 I3L2K1 104 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 MT-CO2P00403 227 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 FCGR3AP08637 254 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 CD36P16671 472 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 AZU1P20160 251 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 ALDH3B2P48448 385 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 PCP4P48539 62 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 SNRPD3P62318 126 aaKnown RBP3.6□□□□□ -1.83
SF3B2-205ENST00000526653 INSL4Q14641 139 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 TIMM50Q3ZCQ8 353 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 C1orf100Q5SVJ3 147 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 OGFRL1Q5TC84 451 aaPredicted RBP3.6□□□□□ -1.83
SF3B2-205ENST00000526653 SPAG16Q8N0X2 631 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 DMBX1Q8NFW5 382 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 OR1L8Q8NGR8 309 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 PGLYRP3Q96LB9 341 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 LINC00052Q96N35 136 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 DERL3Q96Q80 235 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 HSD17B10Q99714 261 aaKnown RBP3.6□□□□□ -1.83
SF3B2-205ENST00000526653 TXN2Q99757 166 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 UPK3BQ9BT76 320 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 CABLES2Q9BTV7 478 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 GABARAPL3Q9BY60 117 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 CLEC2DQ9UHP7 191 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 KCNK7Q9Y2U2 307 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 NSG2Q9Y328 171 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 FAT3Q8TDW7 4589 aa3.6□□□□□ -1.83
SF3B2-205ENST00000526653 IGLV5-37A0A075B6J1 123 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 A0A075B6Q4 140 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 IGKV1D-13A0A0B4J2D9 117 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 TCRBV3S1A0A5B6 114 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 LYRM9A8MSI8 78 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 FOXI3A8MTJ6 420 aaPredicted RBP3.59□□□□□ -1.83
SF3B2-205ENST00000526653 KRTAP9-6A8MVA2 160 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 FAM90A26D6RGX4 464 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 SULT1C2O00338 296 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 EBAG9O00559 213 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 SIVA1O15304 175 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 TMEM50AO95807 157 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 HLA-DQB1P01920 261 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 IGKV1-13P0DP09 117 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 HLA-DRB4P13762 266 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 HTN1P15515 57 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 CRYBB3P26998 211 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 TALDO1P37837 337 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 FLOT2Q14254 428 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 ZNF600Q6ZNG1 722 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 HSD17B13Q7Z5P4 300 aaPredicted RBP3.59□□□□□ -1.83
SF3B2-205ENST00000526653 NKAIN3Q8N8D7 197 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 RXFP4Q8TDU9 374 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 LSM10Q969L4 123 aaKnown RBP3.59□□□□□ -1.83
SF3B2-205ENST00000526653 TMEM230Q96A57 120 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 TMEM18Q96B42 140 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 METTL26Q96S19 204 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 SEPSECSQ9HD40 501 aaKnown RBP3.59□□□□□ -1.83
SF3B2-205ENST00000526653 NDUFA4L2Q9NRX3 87 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 MRPS16Q9Y3D3 137 aaKnown RBP3.59□□□□□ -1.83
SF3B2-205ENST00000526653 OR2W1Q9Y3N9 320 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 HLA-DRB4X5D2U9 266 aa3.59□□□□□ -1.83
SF3B2-205ENST00000526653 F6UB75 175 aa3.58□□□□□ -1.84
SF3B2-205ENST00000526653 SLC22A5O76082 557 aa3.58□□□□□ -1.84
SF3B2-205ENST00000526653 CDK1P06493 297 aa3.58□□□□□ -1.84
SF3B2-205ENST00000526653 NQO2P16083 231 aa3.58□□□□□ -1.84
SF3B2-205ENST00000526653 GABRB1P18505 474 aa3.58□□□□□ -1.84
SF3B2-205ENST00000526653 NPBWR1P48145 328 aa3.58□□□□□ -1.84
SF3B2-205ENST00000526653 HOXA1P49639 335 aaPredicted RBP3.58□□□□□ -1.84
SF3B2-205ENST00000526653 EIF2B2P49770 351 aaKnown RBP3.58□□□□□ -1.84
SF3B2-205ENST00000526653 AP2S1P53680 142 aaPredicted RBP3.58□□□□□ -1.84
SF3B2-205ENST00000526653 KRTAP10-4P60372 401 aaPredicted RBP3.58□□□□□ -1.84
SF3B2-205ENST00000526653 PSG9Q00887 426 aa3.58□□□□□ -1.84
SF3B2-205ENST00000526653 ARL16Q0P5N6 197 aa3.58□□□□□ -1.84
SF3B2-205ENST00000526653 EIF4EBP1Q13541 118 aaPredicted RBP3.58□□□□□ -1.84
SF3B2-205ENST00000526653 ACSM3Q53FZ2 586 aa3.58□□□□□ -1.84
SF3B2-205ENST00000526653 SMIM29Q86T20 159 aa3.58□□□□□ -1.84
SF3B2-205ENST00000526653 NFE4Q86UQ8 179 aa3.58□□□□□ -1.84
SF3B2-205ENST00000526653 ZNF709Q8N972 641 aa3.58□□□□□ -1.84
SF3B2-205ENST00000526653 OR4C16Q8NGL9 310 aa3.58□□□□□ -1.84
SF3B2-205ENST00000526653 OR1P1Q8NH06 330 aa3.58□□□□□ -1.84
SF3B2-205ENST00000526653 RHOXF1Q8NHV9 184 aa3.58□□□□□ -1.84
SF3B2-205ENST00000526653 RAB3CQ96E17 227 aa3.58□□□□□ -1.84
SF3B2-205ENST00000526653 NARS2Q96I59 477 aaKnown RBP3.58□□□□□ -1.84
SF3B2-205ENST00000526653 GABARAPL1Q9H0R8 117 aa3.58□□□□□ -1.84
SF3B2-205ENST00000526653 DCSTAMPQ9H295 470 aa3.58□□□□□ -1.84
SF3B2-205ENST00000526653 FGF20Q9NP95 211 aaPredicted RBP3.58□□□□□ -1.84
SF3B2-205ENST00000526653 CCL28Q9NRJ3 127 aa3.58□□□□□ -1.84
SF3B2-205ENST00000526653 OR51B2Q9Y5P1 312 aa3.58□□□□□ -1.84
SF3B2-205ENST00000526653 FSIP2Q5CZC0 6907 aa3.58□□□□□ -1.84
SF3B2-205ENST00000526653 PKHD1L1Q86WI1 4243 aa3.57□□□□□ -1.84
SF3B2-205ENST00000526653 ZNF701M0R085 212 aaPredicted RBP3.57□□□□□ -1.84
SF3B2-205ENST00000526653 DENRO43583 198 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms