RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 GGTLC3B5MD39 225 aa12.64□□□□□ -0.39
USH1C-204ENST00000526313 PPP1R2P9O14990 202 aa12.64□□□□□ -0.39
USH1C-204ENST00000526313 GGCTO75223 188 aaKnown RBP12.64□□□□□ -0.39
USH1C-204ENST00000526313 CNIH1O95406 144 aa12.64□□□□□ -0.39
USH1C-204ENST00000526313 IGHV4-39P01824 125 aa12.64□□□□□ -0.39
USH1C-204ENST00000526313 OR5AU1Q8NGC0 362 aa12.64□□□□□ -0.39
USH1C-204ENST00000526313 IGSF10Q6WRI0 2623 aa12.63□□□□□ -0.39
USH1C-204ENST00000526313 PGPEP1LA6NFU8 196 aa12.63□□□□□ -0.39
USH1C-204ENST00000526313 TRGC2P03986 189 aa12.63□□□□□ -0.39
USH1C-204ENST00000526313 OR10J4P0C629 311 aa12.63□□□□□ -0.39
USH1C-204ENST00000526313 CD24P25063 80 aa12.63□□□□□ -0.39
USH1C-204ENST00000526313 S100PP25815 95 aa12.63□□□□□ -0.39
USH1C-204ENST00000526313 UBE2E1P51965 193 aa12.63□□□□□ -0.39
USH1C-204ENST00000526313 LGALS4P56470 323 aa12.63□□□□□ -0.39
USH1C-204ENST00000526313 FXYD3Q14802 87 aa12.63□□□□□ -0.39
USH1C-204ENST00000526313 OR1L6Q8NGR2 347 aa12.63□□□□□ -0.39
USH1C-204ENST00000526313 ELOVL1Q9BW60 279 aa12.63□□□□□ -0.39
USH1C-204ENST00000526313 SRD5A3Q9H8P0 318 aa12.63□□□□□ -0.39
USH1C-204ENST00000526313 TOX4O94842 621 aa12.62□□□□□ -0.39
USH1C-204ENST00000526313 ZNF562Q6V9R5 426 aa12.62□□□□□ -0.39
USH1C-204ENST00000526313 SFRP2Q96HF1 295 aa12.62□□□□□ -0.39
USH1C-204ENST00000526313 AURKAIP1Q9NWT8 199 aaPredicted RBP12.62□□□□□ -0.39
USH1C-204ENST00000526313 IGLC1P0CG04 106 aa12.62□□□□□ -0.39
USH1C-204ENST00000526313 FABP9Q0Z7S8 132 aa12.62□□□□□ -0.39
USH1C-204ENST00000526313 LINC00305Q7Z4B0 112 aa12.62□□□□□ -0.39
USH1C-204ENST00000526313 FXYD5Q96DB9 178 aa12.62□□□□□ -0.39
USH1C-204ENST00000526313 PAXXQ9BUH6 204 aa12.62□□□□□ -0.39
USH1C-204ENST00000526313 OR51M1Q9H341 326 aa12.62□□□□□ -0.39
USH1C-204ENST00000526313 K7EIM0 57 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 HIST1H2BKO60814 126 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 TYMSP04818 313 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 HIST1H2BJP06899 126 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 HIST1H2BOP23527 126 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 CRYBB3P26998 211 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 HIST1H2BBP33778 126 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 PDLIM4P50479 330 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 HIST1H2BDP58876 126 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 HIST1H2BCP62807 126 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 UBE2L3P68036 154 aaKnown RBP12.61□□□□□ -0.39
USH1C-204ENST00000526313 FOXL1Q12952 345 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 HES1Q14469 280 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 HIST2H2BEQ16778 126 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.61□□□□□ -0.39
USH1C-204ENST00000526313 TEX38Q6PEX7 206 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 STXBP6Q8NFX7 210 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 OR5T1Q8NG75 326 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 HIST1H2BHQ93079 126 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 PERPQ96FX8 193 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 HIST1H2BNQ99877 126 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 HIST1H2BMQ99879 126 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 IGHV3-21A0A0B4J1V1 117 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 HELTA6NFD8 242 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 K7EN84 100 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 SUMO1P63165 101 aaKnown RBP12.61□□□□□ -0.39
USH1C-204ENST00000526313 ASPHD1Q5U4P2 390 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 NECAP1Q8NC96 275 aa12.61□□□□□ -0.39
USH1C-204ENST00000526313 NPIPB5A8MRT5 1133 aa12.6□□□□□ -0.39
USH1C-204ENST00000526313 HYPMO75409 117 aa12.6□□□□□ -0.39
USH1C-204ENST00000526313 PYYP10082 97 aa12.6□□□□□ -0.39
USH1C-204ENST00000526313 HOXA5P20719 270 aa12.6□□□□□ -0.39
USH1C-204ENST00000526313 MYCNOSP40205 109 aa12.6□□□□□ -0.39
USH1C-204ENST00000526313 FRZBQ92765 325 aa12.6□□□□□ -0.39
USH1C-204ENST00000526313 ACACBO00763 2458 aa12.6□□□□□ -0.39
USH1C-204ENST00000526313 ORM2P19652 201 aa12.59□□□□□ -0.39
USH1C-204ENST00000526313 MEOX2P50222 304 aa12.59□□□□□ -0.39
USH1C-204ENST00000526313 CX3CL1P78423 397 aa12.59□□□□□ -0.39
USH1C-204ENST00000526313 MDFIC2A0A1B0GVS7 189 aa12.59□□□□□ -0.39
USH1C-204ENST00000526313 IGKV1-17P01599 117 aa12.59□□□□□ -0.39
USH1C-204ENST00000526313 KCNIP4Q6PIL6 250 aa12.59□□□□□ -0.39
USH1C-204ENST00000526313 TTC9CQ8N5M4 171 aa12.59□□□□□ -0.39
USH1C-204ENST00000526313 OR1B1Q8NGR6 318 aa12.59□□□□□ -0.39
USH1C-204ENST00000526313 GSX1Q9H4S2 264 aaPredicted RBP12.59□□□□□ -0.39
USH1C-204ENST00000526313 WNK2Q9Y3S1 2297 aa12.58□□□□□ -0.4
USH1C-204ENST00000526313 TRGC1P0CF51 173 aa12.58□□□□□ -0.4
USH1C-204ENST00000526313 PSG1P11464 419 aa12.58□□□□□ -0.4
USH1C-204ENST00000526313 OR10G8Q8NGN5 311 aa12.58□□□□□ -0.4
USH1C-204ENST00000526313 FANCD2OSQ96PS1 177 aa12.58□□□□□ -0.4
USH1C-204ENST00000526313 SPOCK3Q9BQ16 436 aa12.58□□□□□ -0.4
USH1C-204ENST00000526313 TCEAL7Q9BRU2 100 aa12.58□□□□□ -0.4
USH1C-204ENST00000526313 FAM103A1Q9BTL3 118 aaKnown RBP12.58□□□□□ -0.4
USH1C-204ENST00000526313 LPAR2Q9HBW0 351 aa12.58□□□□□ -0.4
USH1C-204ENST00000526313 MED13LQ71F56 2210 aa12.58□□□□□ -0.4
USH1C-204ENST00000526313 ABCA1O95477 2261 aa12.58□□□□□ -0.4
USH1C-204ENST00000526313 IGLV11-55A0A075B6I3 123 aa12.58□□□□□ -0.4
USH1C-204ENST00000526313 FAM3BP58499 235 aaPredicted RBP12.58□□□□□ -0.4
USH1C-204ENST00000526313 NDPQ00604 133 aa12.58□□□□□ -0.4
USH1C-204ENST00000526313 PAX8Q06710 450 aa12.58□□□□□ -0.4
USH1C-204ENST00000526313 CENPWQ5EE01 88 aa12.58□□□□□ -0.4
USH1C-204ENST00000526313 ARPC1AQ92747 370 aa12.58□□□□□ -0.4
USH1C-204ENST00000526313 BTF3L4Q96K17 158 aa12.58□□□□□ -0.4
USH1C-204ENST00000526313 IGF2BP2-AS1Q96M15 143 aa12.58□□□□□ -0.4
USH1C-204ENST00000526313 DOPEY1Q5JWR5 2465 aa12.57□□□□□ -0.4
USH1C-204ENST00000526313 A0A1W2PPQ1 181 aa12.57□□□□□ -0.4
USH1C-204ENST00000526313 VWC2LB2RUY7 222 aa12.57□□□□□ -0.4
USH1C-204ENST00000526313 PPP5D1E7EU14 171 aa12.57□□□□□ -0.4
USH1C-204ENST00000526313 IGLV2-8P01709 118 aa12.57□□□□□ -0.4
USH1C-204ENST00000526313 S100A8P05109 93 aa12.57□□□□□ -0.4
USH1C-204ENST00000526313 FAM106CPP0CH98 169 aa12.57□□□□□ -0.4
USH1C-204ENST00000526313 TMEM11P17152 192 aa12.57□□□□□ -0.4
USH1C-204ENST00000526313 GNG4P50150 75 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms