RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 BMI1P35226 326 aa13.78□□□□□ -0.2
TSPAN4-215ENST00000525334 ODF3L2Q3SX64 289 aa13.78□□□□□ -0.2
TSPAN4-215ENST00000525334 FAM90A2PQ658T7 463 aa13.78□□□□□ -0.2
TSPAN4-215ENST00000525334 OR1S2Q8NGQ3 325 aa13.78□□□□□ -0.2
TSPAN4-215ENST00000525334 VSIRQ9H7M9 311 aa13.78□□□□□ -0.2
TSPAN4-215ENST00000525334 IGKV3-7A0A075B6H7 116 aa13.77□□□□□ -0.21
TSPAN4-215ENST00000525334 IGHV3-66A0A0C4DH42 116 aa13.77□□□□□ -0.21
TSPAN4-215ENST00000525334 FAM90A26D6RGX4 464 aa13.77□□□□□ -0.21
TSPAN4-215ENST00000525334 C3orf84H3BNL1 204 aa13.77□□□□□ -0.21
TSPAN4-215ENST00000525334 IAPPP10997 89 aa13.77□□□□□ -0.21
TSPAN4-215ENST00000525334 ANXA7P20073 488 aaKnown RBP13.77□□□□□ -0.21
TSPAN4-215ENST00000525334 OR10J1P30954 320 aa13.77□□□□□ -0.21
TSPAN4-215ENST00000525334 GGNBP1Q5YKI7 109 aa13.77□□□□□ -0.21
TSPAN4-215ENST00000525334 TCF24Q7RTU0 167 aa13.77□□□□□ -0.21
TSPAN4-215ENST00000525334 LILRB2Q8N423 598 aa13.77□□□□□ -0.21
TSPAN4-215ENST00000525334 NPIPB3Q92617 1050 aa13.77□□□□□ -0.21
TSPAN4-215ENST00000525334 ACY3Q96HD9 319 aa13.77□□□□□ -0.21
TSPAN4-215ENST00000525334 GGTLC1Q9BX51 225 aa13.77□□□□□ -0.21
TSPAN4-215ENST00000525334 PLA2G10O15496 165 aa13.76□□□□□ -0.21
TSPAN4-215ENST00000525334 IFNA4P05014 189 aa13.76□□□□□ -0.21
TSPAN4-215ENST00000525334 OR4E1P0C645 316 aa13.76□□□□□ -0.21
TSPAN4-215ENST00000525334 TFPI2P48307 235 aa13.76□□□□□ -0.21
TSPAN4-215ENST00000525334 DHRS2Q13268 280 aa13.76□□□□□ -0.21
TSPAN4-215ENST00000525334 LYG2Q86SG7 212 aa13.76□□□□□ -0.21
TSPAN4-215ENST00000525334 METTL26Q96S19 204 aa13.76□□□□□ -0.21
TSPAN4-215ENST00000525334 LOC102724200A0A096LPH7 203 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-215ENST00000525334 ADAP1O75689 374 aa13.75□□□□□ -0.21
TSPAN4-215ENST00000525334 NPPCP23582 126 aa13.75□□□□□ -0.21
TSPAN4-215ENST00000525334 ATP5IP56385 69 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-215ENST00000525334 YPEL3P61236 119 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-215ENST00000525334 C4orf46Q504U0 113 aa13.75□□□□□ -0.21
TSPAN4-215ENST00000525334 GBGT1Q8N5D6 347 aa13.75□□□□□ -0.21
TSPAN4-215ENST00000525334 COQ8AQ8NI60 647 aa13.75□□□□□ -0.21
TSPAN4-215ENST00000525334 FAM110AQ9BQ89 295 aa13.75□□□□□ -0.21
TSPAN4-215ENST00000525334 LYRM1O43325 122 aa13.74□□□□□ -0.21
TSPAN4-215ENST00000525334 MED6O75586 246 aa13.74□□□□□ -0.21
TSPAN4-215ENST00000525334 DFFBO76075 338 aa13.74□□□□□ -0.21
TSPAN4-215ENST00000525334 CD5P06127 495 aa13.74□□□□□ -0.21
TSPAN4-215ENST00000525334 CRYBB3P26998 211 aa13.74□□□□□ -0.21
TSPAN4-215ENST00000525334 MUC7Q8TAX7 377 aa13.74□□□□□ -0.21
TSPAN4-215ENST00000525334 Q8WTZ3 238 aa13.74□□□□□ -0.21
TSPAN4-215ENST00000525334 MAGT1Q9H0U3 335 aa13.74□□□□□ -0.21
TSPAN4-215ENST00000525334 TMEM231Q9H6L2 316 aa13.74□□□□□ -0.21
TSPAN4-215ENST00000525334 EDA2RQ9HAV5 297 aa13.74□□□□□ -0.21
TSPAN4-215ENST00000525334 A0A1W2PS18 150 aa13.73□□□□□ -0.21
TSPAN4-215ENST00000525334 MPTX1A8MV57 137 aa13.73□□□□□ -0.21
TSPAN4-215ENST00000525334 SYNGR2O43760 224 aa13.73□□□□□ -0.21
TSPAN4-215ENST00000525334 CNPY1Q3B7I2 92 aa13.73□□□□□ -0.21
TSPAN4-215ENST00000525334 LINC00299Q6ZSB3 139 aa13.73□□□□□ -0.21
TSPAN4-215ENST00000525334 CCDC32Q9BV29 185 aa13.73□□□□□ -0.21
TSPAN4-215ENST00000525334 C20orf85Q9H1P6 137 aa13.73□□□□□ -0.21
TSPAN4-215ENST00000525334 A6NHS1 94 aa13.72□□□□□ -0.21
TSPAN4-215ENST00000525334 WRBO00258 174 aa13.72□□□□□ -0.21
TSPAN4-215ENST00000525334 TOMM40O96008 361 aa13.72□□□□□ -0.21
TSPAN4-215ENST00000525334 GPX4P36969 197 aaPredicted RBP13.72□□□□□ -0.21
TSPAN4-215ENST00000525334 RAB11AP62491 216 aa13.72□□□□□ -0.21
TSPAN4-215ENST00000525334 RPL11P62913 178 aaKnown RBP13.72□□□□□ -0.21
TSPAN4-215ENST00000525334 PAFAH1B2P68402 229 aa13.72□□□□□ -0.21
TSPAN4-215ENST00000525334 APRG1Q8IVJ8 170 aa13.72□□□□□ -0.21
TSPAN4-215ENST00000525334 SLC35E1Q96K37 410 aa13.72□□□□□ -0.21
TSPAN4-215ENST00000525334 CIB3Q96Q77 187 aaPredicted RBP13.72□□□□□ -0.21
TSPAN4-215ENST00000525334 MS4A6AQ9H2W1 248 aa13.72□□□□□ -0.21
TSPAN4-215ENST00000525334 PAIP2BQ9ULR5 123 aaKnown RBP13.72□□□□□ -0.21
TSPAN4-215ENST00000525334 IL4P05112 153 aa13.71□□□□□ -0.21
TSPAN4-215ENST00000525334 RD3LP0DJH9 198 aa13.71□□□□□ -0.21
TSPAN4-215ENST00000525334 P2RY1P47900 373 aa13.71□□□□□ -0.21
TSPAN4-215ENST00000525334 GAMTQ14353 236 aa13.71□□□□□ -0.21
TSPAN4-215ENST00000525334 USF2Q15853 346 aaPredicted RBP13.71□□□□□ -0.21
TSPAN4-215ENST00000525334 ZNF124Q15973 351 aa13.71□□□□□ -0.21
TSPAN4-215ENST00000525334 WFDC3Q8IUB2 231 aa13.71□□□□□ -0.21
TSPAN4-215ENST00000525334 NARS2Q96I59 477 aaKnown RBP13.71□□□□□ -0.21
TSPAN4-215ENST00000525334 MAP6D1Q9H9H5 199 aa13.71□□□□□ -0.21
TSPAN4-215ENST00000525334 IFNA21P01568 189 aa13.7□□□□□ -0.22
TSPAN4-215ENST00000525334 HNRNPCP07910 306 aaKnown RBP eCLIP13.7□□□□□ -0.22
TSPAN4-215ENST00000525334 PSG1P11464 419 aa13.7□□□□□ -0.22
TSPAN4-215ENST00000525334 CMC4P56277 68 aaPredicted RBP13.7□□□□□ -0.22
TSPAN4-215ENST00000525334 CASC10Q5T4H9 136 aa13.7□□□□□ -0.22
TSPAN4-215ENST00000525334 OR4D5Q8NGN0 318 aa13.7□□□□□ -0.22
TSPAN4-215ENST00000525334 U3KQE9 123 aa13.7□□□□□ -0.22
TSPAN4-215ENST00000525334 IGKV1D-37A0A075B6S9 117 aa13.69□□□□□ -0.22
TSPAN4-215ENST00000525334 TRAV2A0A0B4J234 112 aa13.69□□□□□ -0.22
TSPAN4-215ENST00000525334 ZFP92A6NM28 416 aa13.69□□□□□ -0.22
TSPAN4-215ENST00000525334 DNASE2O00115 360 aaPredicted RBP13.69□□□□□ -0.22
TSPAN4-215ENST00000525334 TCRBP04435 133 aa13.69□□□□□ -0.22
TSPAN4-215ENST00000525334 APOC4P55056 127 aa13.69□□□□□ -0.22
TSPAN4-215ENST00000525334 RPP30P78346 268 aaKnown RBP13.69□□□□□ -0.22
TSPAN4-215ENST00000525334 ID3Q02535 119 aa13.69□□□□□ -0.22
TSPAN4-215ENST00000525334 FAM24BQ8N5W8 94 aa13.69□□□□□ -0.22
TSPAN4-215ENST00000525334 MITD1Q8WV92 249 aa13.69□□□□□ -0.22
TSPAN4-215ENST00000525334 S100ZQ8WXG8 99 aa13.69□□□□□ -0.22
TSPAN4-215ENST00000525334 GRAMD2BQ96HH9 432 aa13.69□□□□□ -0.22
TSPAN4-215ENST00000525334 RABAC1Q9UI14 185 aa13.69□□□□□ -0.22
TSPAN4-215ENST00000525334 TRAV6A0A075B6T7 132 aa13.68□□□□□ -0.22
TSPAN4-215ENST00000525334 PRSS46E5RG02 174 aa13.68□□□□□ -0.22
TSPAN4-215ENST00000525334 H3BP45 60 aa13.68□□□□□ -0.22
TSPAN4-215ENST00000525334 LYL1P12980 280 aa13.68□□□□□ -0.22
TSPAN4-215ENST00000525334 RPL35AP18077 110 aaKnown RBP13.68□□□□□ -0.22
TSPAN4-215ENST00000525334 NKX2-1P43699 371 aaPredicted RBP13.68□□□□□ -0.22
TSPAN4-215ENST00000525334 POLR2GP62487 172 aaKnown RBP eCLIP13.68□□□□□ -0.22
TSPAN4-215ENST00000525334 ZNF90Q03938 601 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms