RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 Q8WTZ3 238 aa17.2■□□□□ 0.34
USP47-205ENST00000525257 C1QTNF4Q9BXJ3 329 aa17.2■□□□□ 0.34
USP47-205ENST00000525257 COPZ2Q9P299 210 aa17.2■□□□□ 0.34
USP47-205ENST00000525257 FAM90A26D6RGX4 464 aa17.19■□□□□ 0.34
USP47-205ENST00000525257 CD3DP04234 171 aa17.19■□□□□ 0.34
USP47-205ENST00000525257 RND2P52198 227 aa17.19■□□□□ 0.34
USP47-205ENST00000525257 AP2S1P53680 142 aaPredicted RBP17.19■□□□□ 0.34
USP47-205ENST00000525257 NUTF2P61970 127 aaKnown RBP17.19■□□□□ 0.34
USP47-205ENST00000525257 NCS1P62166 190 aa17.19■□□□□ 0.34
USP47-205ENST00000525257 Q6ZRM9 215 aa17.19■□□□□ 0.34
USP47-205ENST00000525257 OR1S2Q8NGQ3 325 aa17.19■□□□□ 0.34
USP47-205ENST00000525257 KLK11Q9UBX7 282 aa17.19■□□□□ 0.34
USP47-205ENST00000525257 UCP1P25874 307 aa17.18■□□□□ 0.34
USP47-205ENST00000525257 NPY1RP25929 384 aa17.18■□□□□ 0.34
USP47-205ENST00000525257 OR10J1P30954 320 aa17.18■□□□□ 0.34
USP47-205ENST00000525257 HTR2BP41595 481 aa17.18■□□□□ 0.34
USP47-205ENST00000525257 SPCS3P61009 180 aa17.18■□□□□ 0.34
USP47-205ENST00000525257 SNRPD3P62318 126 aaKnown RBP17.18■□□□□ 0.34
USP47-205ENST00000525257 DHODHQ02127 395 aa17.18■□□□□ 0.34
USP47-205ENST00000525257 USF2Q15853 346 aaPredicted RBP17.18■□□□□ 0.34
USP47-205ENST00000525257 PRSS54Q6PEW0 395 aa17.18■□□□□ 0.34
USP47-205ENST00000525257 ARRDC1Q8N5I2 433 aa17.18■□□□□ 0.34
USP47-205ENST00000525257 CCDC71LQ8N9Z2 235 aa17.18■□□□□ 0.34
USP47-205ENST00000525257 VCX3AQ9NNX9 186 aa17.17■□□□□ 0.34
USP47-205ENST00000525257 HEYLQ9NQ87 328 aaPredicted RBP17.17■□□□□ 0.34
USP47-205ENST00000525257 ABCA13Q86UQ4 5058 aa17.16■□□□□ 0.34
USP47-205ENST00000525257 FAM25AB3EWG3 89 aa17.16■□□□□ 0.34
USP47-205ENST00000525257 FAM25CB3EWG5 89 aa17.16■□□□□ 0.34
USP47-205ENST00000525257 FAM25GB3EWG6 89 aa17.16■□□□□ 0.34
USP47-205ENST00000525257 H3BMM0 161 aa17.16■□□□□ 0.34
USP47-205ENST00000525257 IL4P05112 153 aa17.16■□□□□ 0.34
USP47-205ENST00000525257 YPEL3P61236 119 aaPredicted RBP17.16■□□□□ 0.34
USP47-205ENST00000525257 OR4D10Q8NGI6 311 aa17.16■□□□□ 0.34
USP47-205ENST00000525257 OR13C8Q8NGS7 320 aa17.16■□□□□ 0.34
USP47-205ENST00000525257 OR52I2Q8NH67 350 aa17.16■□□□□ 0.34
USP47-205ENST00000525257 ZFAND1Q8TCF1 268 aa17.16■□□□□ 0.34
USP47-205ENST00000525257 NRN1Q9NPD7 142 aa17.16■□□□□ 0.34
USP47-205ENST00000525257 SLC25A4P12235 298 aa17.15■□□□□ 0.34
USP47-205ENST00000525257 VBP1P61758 197 aa17.15■□□□□ 0.34
USP47-205ENST00000525257 SCGB2B2Q4G0G5 96 aa17.15■□□□□ 0.34
USP47-205ENST00000525257 SIGLEC15Q6ZMC9 328 aa17.15■□□□□ 0.34
USP47-205ENST00000525257 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.15■□□□□ 0.34
USP47-205ENST00000525257 MUC4Q99102 2169 aa17.15■□□□□ 0.34
USP47-205ENST00000525257 EMP1P54849 157 aa17.14■□□□□ 0.33
USP47-205ENST00000525257 AARDQ4LEZ3 155 aa17.14■□□□□ 0.33
USP47-205ENST00000525257 C2orf83Q53S99 150 aa17.14■□□□□ 0.33
USP47-205ENST00000525257 OR52E5Q8NH55 327 aa17.14■□□□□ 0.33
USP47-205ENST00000525257 MARCH1Q8TCQ1 289 aa17.14■□□□□ 0.33
USP47-205ENST00000525257 IGLV2-18A0A075B6J9 118 aa17.13■□□□□ 0.33
USP47-205ENST00000525257 IFNA10P01566 189 aa17.13■□□□□ 0.33
USP47-205ENST00000525257 OR5AC1P0C628 307 aa17.13■□□□□ 0.33
USP47-205ENST00000525257 HLA-DRB4P13762 266 aa17.13■□□□□ 0.33
USP47-205ENST00000525257 TBPP20226 339 aa17.13■□□□□ 0.33
USP47-205ENST00000525257 LGALS9BQ3B8N2 356 aa17.13■□□□□ 0.33
USP47-205ENST00000525257 FAM219AQ8IW50 185 aa17.13■□□□□ 0.33
USP47-205ENST00000525257 UBE2DNLQ8IWF7 75 aa17.13■□□□□ 0.33
USP47-205ENST00000525257 SLC24A4Q8NFF2 622 aa17.13■□□□□ 0.33
USP47-205ENST00000525257 TERB2Q8NHR7 220 aa17.13■□□□□ 0.33
USP47-205ENST00000525257 LHFPL5Q8TAF8 219 aa17.13■□□□□ 0.33
USP47-205ENST00000525257 RNASEH2CQ8TDP1 164 aaKnown RBP17.13■□□□□ 0.33
USP47-205ENST00000525257 TMEM222Q9H0R3 208 aa17.13■□□□□ 0.33
USP47-205ENST00000525257 SEPSECSQ9HD40 501 aaKnown RBP17.13■□□□□ 0.33
USP47-205ENST00000525257 CACNG5Q9UF02 275 aa17.13■□□□□ 0.33
USP47-205ENST00000525257 HLA-DRB4X5D2U9 266 aa17.13■□□□□ 0.33
USP47-205ENST00000525257 IGHV3OR16-12A0A075B7B8 117 aa17.12■□□□□ 0.33
USP47-205ENST00000525257 A0A087WXM4 84 aa17.12■□□□□ 0.33
USP47-205ENST00000525257 CEBPZOSA8MTT3 80 aa17.12■□□□□ 0.33
USP47-205ENST00000525257 BUB3O43684 328 aa17.12■□□□□ 0.33
USP47-205ENST00000525257 IGKV3-20P01619 116 aa17.12■□□□□ 0.33
USP47-205ENST00000525257 SPART-AS1P0CW21 52 aa17.12■□□□□ 0.33
USP47-205ENST00000525257 FXYD7P58549 80 aa17.12■□□□□ 0.33
USP47-205ENST00000525257 DEFB1P60022 68 aa17.12■□□□□ 0.33
USP47-205ENST00000525257 ZNF705AQ6ZN79 300 aaPredicted RBP17.12■□□□□ 0.33
USP47-205ENST00000525257 TMEM170AQ8WVE7 144 aa17.12■□□□□ 0.33
USP47-205ENST00000525257 NPIPB3Q92617 1050 aa17.12■□□□□ 0.33
USP47-205ENST00000525257 ACY3Q96HD9 319 aa17.12■□□□□ 0.33
USP47-205ENST00000525257 FUNDC2Q9BWH2 189 aa17.12■□□□□ 0.33
USP47-205ENST00000525257 MTFP1Q9UDX5 166 aa17.12■□□□□ 0.33
USP47-205ENST00000525257 GSTZ1O43708 216 aaPredicted RBP17.11■□□□□ 0.33
USP47-205ENST00000525257 B3GALNT1O75752 331 aa17.11■□□□□ 0.33
USP47-205ENST00000525257 NXPH3O95157 252 aa17.11■□□□□ 0.33
USP47-205ENST00000525257 CDS2O95674 445 aa17.11■□□□□ 0.33
USP47-205ENST00000525257 GDF5OSQ5U4N7 250 aa17.11■□□□□ 0.33
USP47-205ENST00000525257 NEU1Q99519 415 aa17.11■□□□□ 0.33
USP47-205ENST00000525257 ZNF705FA8MVS1 300 aaPredicted RBP17.1■□□□□ 0.33
USP47-205ENST00000525257 TOMM40O96008 361 aa17.1■□□□□ 0.33
USP47-205ENST00000525257 IFNA21P01568 189 aa17.1■□□□□ 0.33
USP47-205ENST00000525257 ZNF705DP0CH99 300 aaPredicted RBP17.1■□□□□ 0.33
USP47-205ENST00000525257 ZNF705BP0CI00 300 aaPredicted RBP17.1■□□□□ 0.33
USP47-205ENST00000525257 RD3LP0DJH9 198 aa17.1■□□□□ 0.33
USP47-205ENST00000525257 NKX2-1P43699 371 aaPredicted RBP17.1■□□□□ 0.33
USP47-205ENST00000525257 MZT2AQ6P582 158 aa17.1■□□□□ 0.33
USP47-205ENST00000525257 GLYATL2Q8WU03 294 aa17.1■□□□□ 0.33
USP47-205ENST00000525257 RBPMSQ93062 196 aaKnown RBP17.1■□□□□ 0.33
USP47-205ENST00000525257 GPR146Q96CH1 333 aa17.1■□□□□ 0.33
USP47-205ENST00000525257 EXTL2Q9UBQ6 330 aa17.1■□□□□ 0.33
USP47-205ENST00000525257 TMEM189A5PLL7 270 aa17.09■□□□□ 0.33
USP47-205ENST00000525257 RAB3DO95716 219 aa17.09■□□□□ 0.33
USP47-205ENST00000525257 CD74P04233 296 aa17.09■□□□□ 0.33
USP47-205ENST00000525257 RORCP51449 518 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms