RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 ZFAND1Q8TCF1 268 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 CASTOR1Q8WTX7 329 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 PHLDA1Q8WV24 401 aaPredicted RBP2.23□□□□□ -2.05
CSDE1-208ENST00000524652 GPR146Q96CH1 333 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 FLYWCH2Q96CP2 140 aaKnown RBP2.23□□□□□ -2.05
CSDE1-208ENST00000524652 TMEM56Q96MV1 263 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 C19orf24Q9BVV8 132 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 TMEM222Q9H0R3 208 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 DPAGT1Q9H3H5 408 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 C16orf95Q9H693 158 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 NUDT15Q9NV35 164 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 BET1LQ9NYM9 111 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 COPZ2Q9P299 210 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 METTL1Q9UBP6 276 aaKnown RBP2.23□□□□□ -2.05
CSDE1-208ENST00000524652 SCP2D1Q9UJQ7 156 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 PITPNC1Q9UKF7 332 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 NUBP2Q9Y5Y2 271 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 TMEM56-RWDD3S4R434 201 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 STARD9Q9P2P6 4700 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 TEX50A0A1B0GTY4 177 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 FAM240BA0A1B0GVZ2 78 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 IGLC7A0M8Q6 106 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 BTBD17A6NE02 478 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 CENPXA8MT69 81 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 UPK2O00526 184 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 CCSO14618 274 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 PITX3O75364 302 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 OR2A4O95047 310 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 NDUFA7O95182 113 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 OR2C1O95371 312 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 HLA-AP01891 365 aaKnown RBP2.22□□□□□ -2.05
CSDE1-208ENST00000524652 PRH1P02810 166 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 IGF1P05019 195 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 REG1AP05451 166 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 RRASP10301 218 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 CD28P10747 220 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 AREGP15514 252 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 NQO2P16083 231 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 KIR2DS2P43631 304 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 LGALS7P47929 136 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 ARHGDIBP52566 201 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 MFAP2P55001 183 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 RAG2P55895 527 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 TAS2R31P59538 309 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 WT1-ASQ06250 92 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 KIAA0141Q14154 515 aaPredicted RBP2.22□□□□□ -2.05
CSDE1-208ENST00000524652 OXA1LQ15070 435 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 TNXAQ16473 311 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 PRSS8Q16651 343 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 RTL8BQ17RB0 113 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 ECSCRQ19T08 205 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 AARDQ4LEZ3 155 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 SPINK9Q5DT21 86 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 C9orf152Q5JTZ5 239 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 LPCAT3Q6P1A2 487 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 SLC35E3Q7Z769 313 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 LYG2Q86SG7 212 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 SGPP2Q8IWX5 399 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 CMTM1Q8IZ96 169 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 STPG2Q8N412 459 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 KLHDC1Q8N7A1 406 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 TCTEX1D1Q8N7M0 179 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 LRTM2Q8N967 370 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 CCDC71LQ8N9Z2 235 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 MINDY2Q8NBR6 621 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 LFNGQ8NES3 379 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 SGMS2Q8NHU3 365 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 TMEM167AQ8TBQ9 72 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 ENKURQ8TC29 256 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 SRSF12Q8WXF0 261 aaKnown RBP2.22□□□□□ -2.05
CSDE1-208ENST00000524652 ARPC1AQ92747 370 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 RBPMSQ93062 196 aaKnown RBP2.22□□□□□ -2.05
CSDE1-208ENST00000524652 ADTRPQ96IZ2 230 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 OR10C1Q96KK4 312 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 OR2A7Q96R45 310 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 RNF5Q99942 180 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 RASL11BQ9BPW5 248 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 SLC25A21Q9BQT8 299 aaPredicted RBP2.22□□□□□ -2.05
CSDE1-208ENST00000524652 MARVELD1Q9BSK0 173 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 ALX4Q9H161 411 aaPredicted RBP2.22□□□□□ -2.05
CSDE1-208ENST00000524652 OR51J1Q9H342 316 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 RANBP3Q9H6Z4 567 aaPredicted RBP2.22□□□□□ -2.05
CSDE1-208ENST00000524652 PALMDQ9NP74 551 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 PARP11Q9NR21 331 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 FAM212BQ9NTI7 297 aaPredicted RBP2.22□□□□□ -2.05
CSDE1-208ENST00000524652 TMEM14BQ9NUH8 114 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 COMMD9Q9P000 198 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 C14orf166Q9Y224 244 aaKnown RBP2.22□□□□□ -2.05
CSDE1-208ENST00000524652 PRELID3BQ9Y3B1 194 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 ALG5Q9Y673 324 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 WSB1Q9Y6I7 421 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 SACSQ9NZJ4 4579 aa2.22□□□□□ -2.05
CSDE1-208ENST00000524652 LYSTQ99698 3801 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 A0A0B4J2A0 478 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 A0A1B0GVG6 124 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 CLPSL1A2RUU4 121 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 C7orf66A4D0T2 115 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 RNF212BA8MTL3 300 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 INMT-MINDY4F8WBC2 141 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 G3V3Q6 166 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms