RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 NRN1Q9NPD7 142 aa8.17□□□□□ -1.1
SDCBP-211ENST00000523441 NDUFB11Q9NX14 153 aa8.17□□□□□ -1.1
SDCBP-211ENST00000523441 LINC00588Q9Y4M8 146 aa8.17□□□□□ -1.1
SDCBP-211ENST00000523441 F6UB75 175 aa8.16□□□□□ -1.1
SDCBP-211ENST00000523441 M0QYG6 137 aa8.16□□□□□ -1.1
SDCBP-211ENST00000523441 SCGB2A1O75556 95 aa8.16□□□□□ -1.1
SDCBP-211ENST00000523441 RNASE2P10153 161 aaKnown RBP8.16□□□□□ -1.1
SDCBP-211ENST00000523441 AP2S1P53680 142 aaPredicted RBP8.16□□□□□ -1.1
SDCBP-211ENST00000523441 SUB1P53999 127 aaKnown RBP eCLIP8.16□□□□□ -1.1
SDCBP-211ENST00000523441 CCL18P55774 89 aa8.16□□□□□ -1.1
SDCBP-211ENST00000523441 FAM3BP58499 235 aaPredicted RBP8.16□□□□□ -1.1
SDCBP-211ENST00000523441 DHODHQ02127 395 aa8.16□□□□□ -1.1
SDCBP-211ENST00000523441 FCN2Q15485 313 aa8.16□□□□□ -1.1
SDCBP-211ENST00000523441 KCTD21Q4G0X4 260 aa8.16□□□□□ -1.1
SDCBP-211ENST00000523441 C1orf158Q8N1D5 194 aa8.16□□□□□ -1.1
SDCBP-211ENST00000523441 OR5H2Q8NGV7 314 aa8.16□□□□□ -1.1
SDCBP-211ENST00000523441 COQ8AQ8NI60 647 aa8.16□□□□□ -1.1
SDCBP-211ENST00000523441 Q8WTZ3 238 aa8.16□□□□□ -1.1
SDCBP-211ENST00000523441 SLC25A38Q96DW6 304 aa8.16□□□□□ -1.1
SDCBP-211ENST00000523441 PDCD10Q9BUL8 212 aa8.16□□□□□ -1.1
SDCBP-211ENST00000523441 TXNL4BQ9NX01 149 aaKnown RBP8.16□□□□□ -1.1
SDCBP-211ENST00000523441 MDFICQ9P1T7 246 aa8.16□□□□□ -1.1
SDCBP-211ENST00000523441 SRRM2Q9UQ35 2752 aaKnown RBP8.15□□□□□ -1.1
SDCBP-211ENST00000523441 ZNF705GA8MUZ8 300 aaPredicted RBP8.15□□□□□ -1.1
SDCBP-211ENST00000523441 IGKV1-17P01599 117 aa8.15□□□□□ -1.1
SDCBP-211ENST00000523441 SMR3BP02814 79 aaPredicted RBP8.15□□□□□ -1.1
SDCBP-211ENST00000523441 IL4P05112 153 aa8.15□□□□□ -1.1
SDCBP-211ENST00000523441 RORCP51449 518 aa8.15□□□□□ -1.1
SDCBP-211ENST00000523441 USF2Q15853 346 aaPredicted RBP8.15□□□□□ -1.1
SDCBP-211ENST00000523441 SSX7Q7RTT5 188 aa8.15□□□□□ -1.1
SDCBP-211ENST00000523441 OR4X1Q8NH49 305 aa8.15□□□□□ -1.1
SDCBP-211ENST00000523441 C18orf15Q96N68 181 aa8.15□□□□□ -1.1
SDCBP-211ENST00000523441 KRTAP1-5Q9BYS1 174 aa8.15□□□□□ -1.1
SDCBP-211ENST00000523441 ENY2Q9NPA8 101 aa8.15□□□□□ -1.1
SDCBP-211ENST00000523441 DIABLOQ9NR28 239 aa8.15□□□□□ -1.1
SDCBP-211ENST00000523441 FLG2Q5D862 2391 aaPredicted RBP8.14□□□□□ -1.11
SDCBP-211ENST00000523441 HLA-DMAP28067 261 aa8.14□□□□□ -1.11
SDCBP-211ENST00000523441 S100GP29377 79 aa8.14□□□□□ -1.11
SDCBP-211ENST00000523441 SDC2P34741 201 aa8.14□□□□□ -1.11
SDCBP-211ENST00000523441 CBX5P45973 191 aa8.14□□□□□ -1.11
SDCBP-211ENST00000523441 RND2P52198 227 aa8.14□□□□□ -1.11
SDCBP-211ENST00000523441 AKR1C2P52895 323 aa8.14□□□□□ -1.11
SDCBP-211ENST00000523441 AQP4P55087 323 aa8.14□□□□□ -1.11
SDCBP-211ENST00000523441 TSPAN5P62079 268 aa8.14□□□□□ -1.11
SDCBP-211ENST00000523441 OXA1LQ15070 435 aa8.14□□□□□ -1.11
SDCBP-211ENST00000523441 ZNF709Q8N972 641 aa8.14□□□□□ -1.11
SDCBP-211ENST00000523441 OR6F1Q8NGZ6 308 aa8.14□□□□□ -1.11
SDCBP-211ENST00000523441 FRZBQ92765 325 aa8.14□□□□□ -1.11
SDCBP-211ENST00000523441 PBDC1Q9BVG4 233 aa8.14□□□□□ -1.11
SDCBP-211ENST00000523441 WDR12Q9GZL7 423 aaKnown RBP8.14□□□□□ -1.11
SDCBP-211ENST00000523441 SAV1Q9H4B6 383 aaPredicted RBP8.14□□□□□ -1.11
SDCBP-211ENST00000523441 Q9H8V8 135 aa8.14□□□□□ -1.11
SDCBP-211ENST00000523441 U3KQE9 123 aa8.14□□□□□ -1.11
SDCBP-211ENST00000523441 J3QL48 77 aa8.13□□□□□ -1.11
SDCBP-211ENST00000523441 PSMB9P28065 219 aa8.13□□□□□ -1.11
SDCBP-211ENST00000523441 OR10J1P30954 320 aa8.13□□□□□ -1.11
SDCBP-211ENST00000523441 NKX2-1P43699 371 aaPredicted RBP8.13□□□□□ -1.11
SDCBP-211ENST00000523441 TAS2R20P59543 309 aa8.13□□□□□ -1.11
SDCBP-211ENST00000523441 PSG9Q00887 426 aa8.13□□□□□ -1.11
SDCBP-211ENST00000523441 TBCEQ15813 527 aaPredicted RBP8.13□□□□□ -1.11
SDCBP-211ENST00000523441 FAM78BQ5VT40 261 aa8.13□□□□□ -1.11
SDCBP-211ENST00000523441 DHRS11Q6UWP2 260 aa8.13□□□□□ -1.11
SDCBP-211ENST00000523441 ACY3Q96HD9 319 aa8.13□□□□□ -1.11
SDCBP-211ENST00000523441 MYCBP2O75592 4640 aa8.13□□□□□ -1.11
SDCBP-211ENST00000523441 CORTO00230 105 aa8.12□□□□□ -1.11
SDCBP-211ENST00000523441 HTN1P15515 57 aa8.12□□□□□ -1.11
SDCBP-211ENST00000523441 HRH1P35367 487 aa8.12□□□□□ -1.11
SDCBP-211ENST00000523441 HAMPP81172 84 aa8.12□□□□□ -1.11
SDCBP-211ENST00000523441 LYPD1Q8N2G4 141 aa8.12□□□□□ -1.11
SDCBP-211ENST00000523441 OR51G1Q8NGK1 321 aa8.12□□□□□ -1.11
SDCBP-211ENST00000523441 RNASE11Q8TAA1 199 aaKnown RBP8.12□□□□□ -1.11
SDCBP-211ENST00000523441 RNF141Q8WVD5 230 aa8.12□□□□□ -1.11
SDCBP-211ENST00000523441 TRAV30A0A087WSZ9 112 aa8.11□□□□□ -1.11
SDCBP-211ENST00000523441 A0A0B4J293 547 aa8.11□□□□□ -1.11
SDCBP-211ENST00000523441 NXPH3O95157 252 aa8.11□□□□□ -1.11
SDCBP-211ENST00000523441 IGKV1-5P01602 117 aa8.11□□□□□ -1.11
SDCBP-211ENST00000523441 IGLC1P0CG04 106 aa8.11□□□□□ -1.11
SDCBP-211ENST00000523441 PGAM2P15259 253 aa8.11□□□□□ -1.11
SDCBP-211ENST00000523441 PI3P19957 117 aa8.11□□□□□ -1.11
SDCBP-211ENST00000523441 ID1P41134 155 aa8.11□□□□□ -1.11
SDCBP-211ENST00000523441 TAS2R46P59540 309 aa8.11□□□□□ -1.11
SDCBP-211ENST00000523441 EBLN2Q6P2I7 272 aa8.11□□□□□ -1.11
SDCBP-211ENST00000523441 FOXI2Q6ZQN5 318 aa8.11□□□□□ -1.11
SDCBP-211ENST00000523441 CADM3Q8N126 398 aa8.11□□□□□ -1.11
SDCBP-211ENST00000523441 OR1S2Q8NGQ3 325 aa8.11□□□□□ -1.11
SDCBP-211ENST00000523441 CNBD2Q96M20 576 aa8.11□□□□□ -1.11
SDCBP-211ENST00000523441 ZNF586Q9NXT0 402 aa8.11□□□□□ -1.11
SDCBP-211ENST00000523441 SSR3Q9UNL2 185 aa8.11□□□□□ -1.11
SDCBP-211ENST00000523441 A0A0J9YY99 117 aa8.1□□□□□ -1.11
SDCBP-211ENST00000523441 LOC100506127A0A0U1RQW1 187 aa8.1□□□□□ -1.11
SDCBP-211ENST00000523441 M0R2Z0 102 aa8.1□□□□□ -1.11
SDCBP-211ENST00000523441 BUB3O43684 328 aa8.1□□□□□ -1.11
SDCBP-211ENST00000523441 RD3LP0DJH9 198 aa8.1□□□□□ -1.11
SDCBP-211ENST00000523441 HSPA13P48723 471 aa8.1□□□□□ -1.11
SDCBP-211ENST00000523441 XGP55808 180 aa8.1□□□□□ -1.11
SDCBP-211ENST00000523441 OR5I1Q13606 314 aa8.1□□□□□ -1.11
SDCBP-211ENST00000523441 PRSS54Q6PEW0 395 aa8.1□□□□□ -1.11
SDCBP-211ENST00000523441 FCGR1BQ92637 280 aa8.1□□□□□ -1.11
SDCBP-211ENST00000523441 GPR146Q96CH1 333 aa8.1□□□□□ -1.11
SDCBP-211ENST00000523441 SCPEP1Q9HB40 452 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 234.9 ms