RNA–Protein interactions for RNA: ENST00000522746.5

FAM49B-223, Transcript of family with sequence similarity 49 member B, human

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-223	ENST00000522746	POLQ	O75417	2590 aa		13.21	□□□□□ -0.29
FAM49B-223	ENST00000522746	PGPEP1L	A6NFU8	196 aa		13.21	□□□□□ -0.3
FAM49B-223	ENST00000522746	CTRB1	P17538	263 aa		13.21	□□□□□ -0.3
FAM49B-223	ENST00000522746	C10orf113	Q5VZT2	155 aa		13.21	□□□□□ -0.3
FAM49B-223	ENST00000522746	CTRB2	Q6GPI1	263 aa		13.21	□□□□□ -0.3
FAM49B-223	ENST00000522746	C16orf82	Q7Z2V1	217 aa		13.21	□□□□□ -0.3
FAM49B-223	ENST00000522746	C22orf15	Q8WYQ4	148 aa		13.21	□□□□□ -0.3
FAM49B-223	ENST00000522746	SRSF8	Q9BRL6	282 aa	Known RBP	13.21	□□□□□ -0.3
FAM49B-223	ENST00000522746	SAV1	Q9H4B6	383 aa	Predicted RBP	13.21	□□□□□ -0.3
FAM49B-223	ENST00000522746	ABCA2	Q9BZC7	2435 aa		13.21	□□□□□ -0.3
FAM49B-223	ENST00000522746	CSMD1	Q96PZ7	3565 aa		13.2	□□□□□ -0.3
FAM49B-223	ENST00000522746	TRBV20OR9-2	A0A075B6H5	130 aa		13.2	□□□□□ -0.3
FAM49B-223	ENST00000522746	IGHV4-61	A0A0C4DH41	118 aa		13.2	□□□□□ -0.3
FAM49B-223	ENST00000522746		I3L2K1	104 aa		13.2	□□□□□ -0.3
FAM49B-223	ENST00000522746	EBI3	Q14213	229 aa		13.2	□□□□□ -0.3
FAM49B-223	ENST00000522746	FAM120AOS	Q5T036	256 aa		13.2	□□□□□ -0.3
FAM49B-223	ENST00000522746	MALSU1	Q96EH3	234 aa		13.2	□□□□□ -0.3
FAM49B-223	ENST00000522746	PERP	Q96FX8	193 aa		13.2	□□□□□ -0.3
FAM49B-223	ENST00000522746	PFDN5	Q99471	154 aa		13.2	□□□□□ -0.3
FAM49B-223	ENST00000522746	TRGV9	Q99603	122 aa		13.2	□□□□□ -0.3
FAM49B-223	ENST00000522746	PIMREG	Q9BSJ6	248 aa		13.2	□□□□□ -0.3
FAM49B-223	ENST00000522746	CTDSP1	Q9GZU7	261 aa		13.2	□□□□□ -0.3
FAM49B-223	ENST00000522746	ZNF355P	Q9NSJ1	428 aa		13.2	□□□□□ -0.3
FAM49B-223	ENST00000522746	TBL2	Q9Y4P3	447 aa	Known RBP	13.2	□□□□□ -0.3
FAM49B-223	ENST00000522746	SAA4	P35542	130 aa		13.2	□□□□□ -0.3
FAM49B-223	ENST00000522746	RPS10	P46783	165 aa	Known RBP	13.2	□□□□□ -0.3
FAM49B-223	ENST00000522746	OR5AU1	Q8NGC0	362 aa		13.2	□□□□□ -0.3
FAM49B-223	ENST00000522746	OR1L4	Q8NGR5	311 aa		13.2	□□□□□ -0.3
FAM49B-223	ENST00000522746	RNF2	Q99496	336 aa		13.2	□□□□□ -0.3
FAM49B-223	ENST00000522746	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.19	□□□□□ -0.3
FAM49B-223	ENST00000522746	TMEM11	P17152	192 aa		13.19	□□□□□ -0.3
FAM49B-223	ENST00000522746	ATP5J2	P56134	94 aa		13.19	□□□□□ -0.3
FAM49B-223	ENST00000522746	BPIFB3	P59826	476 aa		13.19	□□□□□ -0.3
FAM49B-223	ENST00000522746	CX3CL1	P78423	397 aa		13.19	□□□□□ -0.3
FAM49B-223	ENST00000522746	NDP	Q00604	133 aa		13.19	□□□□□ -0.3
FAM49B-223	ENST00000522746	LINC01551	Q86U37	167 aa		13.19	□□□□□ -0.3
FAM49B-223	ENST00000522746	C10orf105	Q8TEF2	133 aa		13.19	□□□□□ -0.3
FAM49B-223	ENST00000522746	ORM2	P19652	201 aa		13.18	□□□□□ -0.3
FAM49B-223	ENST00000522746	OR1B1	Q8NGR6	318 aa		13.18	□□□□□ -0.3
FAM49B-223	ENST00000522746	TENM4	Q6N022	2769 aa		13.18	□□□□□ -0.3
FAM49B-223	ENST00000522746	PYY	P10082	97 aa		13.18	□□□□□ -0.3
FAM49B-223	ENST00000522746	COX6B1	P14854	86 aa		13.18	□□□□□ -0.3
FAM49B-223	ENST00000522746	KLF17	Q5JT82	389 aa	Predicted RBP	13.18	□□□□□ -0.3
FAM49B-223	ENST00000522746	ASPHD1	Q5U4P2	390 aa		13.18	□□□□□ -0.3
FAM49B-223	ENST00000522746	PIP4P2	Q8N4L2	257 aa		13.18	□□□□□ -0.3
FAM49B-223	ENST00000522746	NECAP1	Q8NC96	275 aa		13.18	□□□□□ -0.3
FAM49B-223	ENST00000522746	PRELID1	Q9Y255	219 aa		13.18	□□□□□ -0.3
FAM49B-223	ENST00000522746	ARL2-SNX15	V9GYD0	113 aa		13.18	□□□□□ -0.3
FAM49B-223	ENST00000522746	ABCA1	O95477	2261 aa		13.18	□□□□□ -0.3
FAM49B-223	ENST00000522746	IGHV4-30-2	A0A087WSY4	118 aa		13.17	□□□□□ -0.3
FAM49B-223	ENST00000522746	GGTLC3	B5MD39	225 aa		13.17	□□□□□ -0.3
FAM49B-223	ENST00000522746		K7EIM0	57 aa		13.17	□□□□□ -0.3
FAM49B-223	ENST00000522746	UBE2L3	P68036	154 aa	Known RBP	13.17	□□□□□ -0.3
FAM49B-223	ENST00000522746	ZNF562	Q6V9R5	426 aa		13.17	□□□□□ -0.3
FAM49B-223	ENST00000522746	LINC00305	Q7Z4B0	112 aa		13.17	□□□□□ -0.3
FAM49B-223	ENST00000522746	ARPC1A	Q92747	370 aa		13.17	□□□□□ -0.3
FAM49B-223	ENST00000522746	C11orf52	Q96A22	123 aa		13.17	□□□□□ -0.3
FAM49B-223	ENST00000522746	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	13.17	□□□□□ -0.3
FAM49B-223	ENST00000522746	USP9Y	O00507	2555 aa	Predicted RBP	13.17	□□□□□ -0.3
FAM49B-223	ENST00000522746	CELSR1	Q9NYQ6	3014 aa		13.17	□□□□□ -0.3
FAM49B-223	ENST00000522746	VWC2L	B2RUY7	222 aa		13.17	□□□□□ -0.3
FAM49B-223	ENST00000522746		H7BYZ3	331 aa		13.17	□□□□□ -0.3
FAM49B-223	ENST00000522746	IGLC1	P0CG04	106 aa		13.17	□□□□□ -0.3
FAM49B-223	ENST00000522746	CENPVL3	A0A0U1RRI6	287 aa		13.16	□□□□□ -0.3
FAM49B-223	ENST00000522746	NPFF	O15130	113 aa		13.16	□□□□□ -0.3
FAM49B-223	ENST00000522746	HNF1A	P20823	631 aa		13.16	□□□□□ -0.3
FAM49B-223	ENST00000522746	KRTAP10-9	P60411	292 aa		13.16	□□□□□ -0.3
FAM49B-223	ENST00000522746	CLEC2A	Q6UVW9	174 aa		13.16	□□□□□ -0.3
FAM49B-223	ENST00000522746	ELOVL1	Q9BW60	279 aa		13.16	□□□□□ -0.3
FAM49B-223	ENST00000522746	BIN3	Q9NQY0	253 aa		13.16	□□□□□ -0.3
FAM49B-223	ENST00000522746	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.15	□□□□□ -0.3
FAM49B-223	ENST00000522746	FAM106CP	P0CH98	169 aa		13.15	□□□□□ -0.3
FAM49B-223	ENST00000522746	CRYBB3	P26998	211 aa		13.15	□□□□□ -0.3
FAM49B-223	ENST00000522746		Q8N9W7	124 aa		13.15	□□□□□ -0.3
FAM49B-223	ENST00000522746	FAM210B	Q96KR6	192 aa		13.15	□□□□□ -0.3
FAM49B-223	ENST00000522746	PAXX	Q9BUH6	204 aa		13.15	□□□□□ -0.3
FAM49B-223	ENST00000522746	IGHV3OR16-10	A0A075B7F0	116 aa		13.15	□□□□□ -0.3
FAM49B-223	ENST00000522746	SNRPC	P09234	159 aa	Known RBP	13.15	□□□□□ -0.3
FAM49B-223	ENST00000522746	RPL35	P42766	123 aa	Known RBP	13.15	□□□□□ -0.3
FAM49B-223	ENST00000522746	GALR1	P47211	349 aa		13.15	□□□□□ -0.3
FAM49B-223	ENST00000522746	SUMO1	P63165	101 aa	Known RBP	13.15	□□□□□ -0.3
FAM49B-223	ENST00000522746	PAX8	Q06710	450 aa		13.15	□□□□□ -0.3
FAM49B-223	ENST00000522746	TIGIT	Q495A1	244 aa		13.15	□□□□□ -0.3
FAM49B-223	ENST00000522746	C1QL4	Q86Z23	238 aa		13.15	□□□□□ -0.3
FAM49B-223	ENST00000522746	OCC1	Q8TAD7	63 aa		13.15	□□□□□ -0.3
FAM49B-223	ENST00000522746	ANAPC16	Q96DE5	110 aa		13.15	□□□□□ -0.3
FAM49B-223	ENST00000522746	OR51M1	Q9H341	326 aa		13.15	□□□□□ -0.3
FAM49B-223	ENST00000522746		S4R3C0	116 aa		13.15	□□□□□ -0.3
FAM49B-223	ENST00000522746	NDUFS8	O00217	210 aa		13.14	□□□□□ -0.31
FAM49B-223	ENST00000522746	PFN1	P07737	140 aa	Known RBP	13.14	□□□□□ -0.31
FAM49B-223	ENST00000522746	PSG1	P11464	419 aa		13.14	□□□□□ -0.31
FAM49B-223	ENST00000522746	RBM14	Q96PK6	669 aa	Known RBP	13.14	□□□□□ -0.31
FAM49B-223	ENST00000522746	ABCA12	Q86UK0	2595 aa		13.14	□□□□□ -0.31
FAM49B-223	ENST00000522746	IGHV7-81	A0A0B4J1V7	117 aa		13.14	□□□□□ -0.31
FAM49B-223	ENST00000522746		A0A1W2PRE2	83 aa		13.14	□□□□□ -0.31
FAM49B-223	ENST00000522746	SNRPE	P62304	92 aa	Known RBP	13.14	□□□□□ -0.31
FAM49B-223	ENST00000522746	FXYD5	Q96DB9	178 aa		13.14	□□□□□ -0.31
FAM49B-223	ENST00000522746	FANCD2OS	Q96PS1	177 aa		13.14	□□□□□ -0.31
FAM49B-223	ENST00000522746	PTPN13	Q12923	2485 aa		13.14	□□□□□ -0.31
FAM49B-223	ENST00000522746	TRBV24-1	A0A075B6N3	115 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 73 ms