RNA–Protein interactions for RNA: ENST00000521767.1

UBR5-211, Transcript of ubiquitin protein ligase E3 component n-recognin 5, human

TSL 3

Gene UBR5, Length 1,763 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR5-211	ENST00000521767	GCSAML	Q5JQS6	135 aa		10.48	□□□□□ -0.73
UBR5-211	ENST00000521767	NECAP1	Q8NC96	275 aa		10.48	□□□□□ -0.73
UBR5-211	ENST00000521767	VN1R17P	Q8TDU5	208 aa		10.48	□□□□□ -0.73
UBR5-211	ENST00000521767	SFT2D1	Q8WV19	159 aa		10.48	□□□□□ -0.73
UBR5-211	ENST00000521767	MARC2	Q969Z3	335 aa		10.48	□□□□□ -0.73
UBR5-211	ENST00000521767	NPFFR1	Q9GZQ6	430 aa		10.48	□□□□□ -0.73
UBR5-211	ENST00000521767	GSX1	Q9H4S2	264 aa	Predicted RBP	10.48	□□□□□ -0.73
UBR5-211	ENST00000521767	ZNF580	Q9UK33	172 aa		10.48	□□□□□ -0.73
UBR5-211	ENST00000521767	MFSD2B	A6NFX1	497 aa		10.47	□□□□□ -0.73
UBR5-211	ENST00000521767	PPIF	P30405	207 aa	Known RBP	10.47	□□□□□ -0.73
UBR5-211	ENST00000521767	NPBWR1	P48145	328 aa		10.47	□□□□□ -0.73
UBR5-211	ENST00000521767	SPSB3	Q6PJ21	355 aa		10.47	□□□□□ -0.73
UBR5-211	ENST00000521767	MBD3L1	Q8WWY6	194 aa		10.47	□□□□□ -0.73
UBR5-211	ENST00000521767	MS4A10	Q96PG2	267 aa		10.47	□□□□□ -0.73
UBR5-211	ENST00000521767	ACTR3C	Q9C0K3	210 aa	Predicted RBP	10.47	□□□□□ -0.73
UBR5-211	ENST00000521767		S4R3C0	116 aa		10.47	□□□□□ -0.73
UBR5-211	ENST00000521767	MTOR	P42345	2549 aa		10.47	□□□□□ -0.73
UBR5-211	ENST00000521767	NUDT19	A8MXV4	375 aa		10.47	□□□□□ -0.73
UBR5-211	ENST00000521767	IGLC1	P0CG04	106 aa		10.47	□□□□□ -0.73
UBR5-211	ENST00000521767	DEFA5	Q01523	94 aa		10.47	□□□□□ -0.73
UBR5-211	ENST00000521767	FAM122C	Q6P4D5	195 aa		10.47	□□□□□ -0.73
UBR5-211	ENST00000521767	SSX7	Q7RTT5	188 aa		10.47	□□□□□ -0.73
UBR5-211	ENST00000521767	CITED4	Q96RK1	184 aa		10.47	□□□□□ -0.73
UBR5-211	ENST00000521767	C21orf62	Q9NYP8	219 aa		10.47	□□□□□ -0.73
UBR5-211	ENST00000521767	CDC42EP3	Q9UKI2	254 aa		10.47	□□□□□ -0.73
UBR5-211	ENST00000521767	TRAV1-1	A0A0B4J248	108 aa		10.46	□□□□□ -0.74
UBR5-211	ENST00000521767		A0A1B0GV50	99 aa		10.46	□□□□□ -0.74
UBR5-211	ENST00000521767		A0A1W2PPV4	95 aa		10.46	□□□□□ -0.74
UBR5-211	ENST00000521767	SEC14L6	B5MCN3	397 aa		10.46	□□□□□ -0.74
UBR5-211	ENST00000521767	BRI3	O95415	125 aa		10.46	□□□□□ -0.74
UBR5-211	ENST00000521767	HBE1	P02100	147 aa		10.46	□□□□□ -0.74
UBR5-211	ENST00000521767	SRD5A1	P18405	259 aa		10.46	□□□□□ -0.74
UBR5-211	ENST00000521767	CCL20	P78556	96 aa		10.46	□□□□□ -0.74
UBR5-211	ENST00000521767	C15orf32	Q32M92	178 aa		10.46	□□□□□ -0.74
UBR5-211	ENST00000521767	LCN15	Q6UWW0	184 aa		10.46	□□□□□ -0.74
UBR5-211	ENST00000521767	IL34	Q6ZMJ4	242 aa		10.46	□□□□□ -0.74
UBR5-211	ENST00000521767	RAB24	Q969Q5	203 aa		10.46	□□□□□ -0.74
UBR5-211	ENST00000521767	TXN2	Q99757	166 aa		10.46	□□□□□ -0.74
UBR5-211	ENST00000521767	ZNF702P	Q9H963	129 aa		10.46	□□□□□ -0.74
UBR5-211	ENST00000521767	SETX	Q7Z333	2677 aa	Known RBP	10.45	□□□□□ -0.74
UBR5-211	ENST00000521767	TRAV30	A0A087WSZ9	112 aa		10.45	□□□□□ -0.74
UBR5-211	ENST00000521767	CTXND1	A0A1B0GTU2	59 aa		10.45	□□□□□ -0.74
UBR5-211	ENST00000521767	RAB19	A4D1S5	217 aa		10.45	□□□□□ -0.74
UBR5-211	ENST00000521767	DNAJC9-AS1	A6NH13	148 aa		10.45	□□□□□ -0.74
UBR5-211	ENST00000521767		F8W735	103 aa	Predicted RBP	10.45	□□□□□ -0.74
UBR5-211	ENST00000521767		H3BUA1	57 aa		10.45	□□□□□ -0.74
UBR5-211	ENST00000521767	GNG7	O60262	68 aa		10.45	□□□□□ -0.74
UBR5-211	ENST00000521767	IGKV1-17	P01599	117 aa		10.45	□□□□□ -0.74
UBR5-211	ENST00000521767	FCGR2B	P31994	310 aa	Predicted RBP	10.45	□□□□□ -0.74
UBR5-211	ENST00000521767	TMEM95	Q3KNT9	176 aa		10.45	□□□□□ -0.74
UBR5-211	ENST00000521767	TIGIT	Q495A1	244 aa		10.45	□□□□□ -0.74
UBR5-211	ENST00000521767		Q56UQ5	140 aa		10.45	□□□□□ -0.74
UBR5-211	ENST00000521767	EIF4E3	Q8N5X7	224 aa	Known RBP	10.45	□□□□□ -0.74
UBR5-211	ENST00000521767	SLC25A22	Q9H936	323 aa		10.45	□□□□□ -0.74
UBR5-211	ENST00000521767	MAP1LC3B2	A6NCE7	125 aa		10.44	□□□□□ -0.74
UBR5-211	ENST00000521767	FAM223B	A6NKX1	122 aa		10.44	□□□□□ -0.74
UBR5-211	ENST00000521767	EIF3G	O75821	320 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
UBR5-211	ENST00000521767	IGLV1-40	P01703	118 aa		10.44	□□□□□ -0.74
UBR5-211	ENST00000521767	IGHV3-23	P01764	117 aa		10.44	□□□□□ -0.74
UBR5-211	ENST00000521767	TRGV3	P03979	118 aa		10.44	□□□□□ -0.74
UBR5-211	ENST00000521767	CDC34	P49427	236 aa	Predicted RBP	10.44	□□□□□ -0.74
UBR5-211	ENST00000521767	CFHR3	Q02985	330 aa		10.44	□□□□□ -0.74
UBR5-211	ENST00000521767	LCE2D	Q5TA82	110 aa	Predicted RBP	10.44	□□□□□ -0.74
UBR5-211	ENST00000521767	FAM223A	Q8IWN6	122 aa		10.44	□□□□□ -0.74
UBR5-211	ENST00000521767	COMMD1	Q8N668	190 aa		10.44	□□□□□ -0.74
UBR5-211	ENST00000521767	ZNF502	Q8TBZ5	544 aa		10.44	□□□□□ -0.74
UBR5-211	ENST00000521767	C19orf24	Q9BVV8	132 aa		10.44	□□□□□ -0.74
UBR5-211	ENST00000521767	MAP1LC3B	Q9GZQ8	125 aa		10.44	□□□□□ -0.74
UBR5-211	ENST00000521767	DNAJC4	Q9NNZ3	241 aa		10.44	□□□□□ -0.74
UBR5-211	ENST00000521767	ESM1	Q9NQ30	184 aa		10.44	□□□□□ -0.74
UBR5-211	ENST00000521767	HMGB3	O15347	200 aa	Known RBP	10.44	□□□□□ -0.74
UBR5-211	ENST00000521767	FABP1	P07148	127 aa		10.44	□□□□□ -0.74
UBR5-211	ENST00000521767	PSG1	P11464	419 aa		10.44	□□□□□ -0.74
UBR5-211	ENST00000521767	FGF8	P55075	233 aa	Predicted RBP	10.44	□□□□□ -0.74
UBR5-211	ENST00000521767	RHOB	P62745	196 aa		10.44	□□□□□ -0.74
UBR5-211	ENST00000521767	ATP5G2	Q06055	141 aa		10.44	□□□□□ -0.74
UBR5-211	ENST00000521767		Q8N2B8	174 aa		10.44	□□□□□ -0.74
UBR5-211	ENST00000521767	TMEM37	Q8WXS4	190 aa		10.44	□□□□□ -0.74
UBR5-211	ENST00000521767	TRBV7-1	A0A0A6YYK4	115 aa		10.43	□□□□□ -0.74
UBR5-211	ENST00000521767	PSMB11	A5LHX3	300 aa		10.43	□□□□□ -0.74
UBR5-211	ENST00000521767	CLDN34	H7C241	214 aa		10.43	□□□□□ -0.74
UBR5-211	ENST00000521767	RD3L	P0DJH9	198 aa		10.43	□□□□□ -0.74
UBR5-211	ENST00000521767	PF4V1	P10720	104 aa		10.43	□□□□□ -0.74
UBR5-211	ENST00000521767	YPEL3	P61236	119 aa	Predicted RBP	10.43	□□□□□ -0.74
UBR5-211	ENST00000521767	FAM78B	Q5VT40	261 aa		10.43	□□□□□ -0.74
UBR5-211	ENST00000521767	OR1L4	Q8NGR5	311 aa		10.43	□□□□□ -0.74
UBR5-211	ENST00000521767	GATAD1	Q8WUU5	269 aa		10.43	□□□□□ -0.74
UBR5-211	ENST00000521767	EEF1AKMT3	Q96AZ1	226 aa		10.43	□□□□□ -0.74
UBR5-211	ENST00000521767	SEPSECS	Q9HD40	501 aa	Known RBP	10.43	□□□□□ -0.74
UBR5-211	ENST00000521767	FAM181B	A6NEQ2	426 aa		10.42	□□□□□ -0.74
UBR5-211	ENST00000521767	OR2T8	A6NH00	312 aa		10.42	□□□□□ -0.74
UBR5-211	ENST00000521767	COX7A2P2	O60397	106 aa		10.42	□□□□□ -0.74
UBR5-211	ENST00000521767	IGHG4	P01861	327 aa		10.42	□□□□□ -0.74
UBR5-211	ENST00000521767	CLEC3B	P05452	202 aa		10.42	□□□□□ -0.74
UBR5-211	ENST00000521767	CTSG	P08311	255 aa		10.42	□□□□□ -0.74
UBR5-211	ENST00000521767	TPPP2	P59282	170 aa		10.42	□□□□□ -0.74
UBR5-211	ENST00000521767	PLP1	P60201	277 aa		10.42	□□□□□ -0.74
UBR5-211	ENST00000521767	SPATA31B1P	Q5VZV4	182 aa		10.42	□□□□□ -0.74
UBR5-211	ENST00000521767	PATE2	Q6UY27	113 aa		10.42	□□□□□ -0.74
UBR5-211	ENST00000521767		Q71RC1	249 aa	Predicted RBP	10.42	□□□□□ -0.74

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