RNA–Protein interactions for RNA: ENST00000521678.1

IGHV3-60-201, Transcript of immunoglobulin heavy variable 3-60 (pseudogene), humanhuman

BASIC

Gene IGHV3-60, Length 354 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-60-201ENST00000521678 FNDC4Q9H6D8 234 aaPredicted RBP8.21□□□□□ -1.1
IGHV3-60-201ENST00000521678 IFT46Q9NQC8 304 aa8.21□□□□□ -1.1
IGHV3-60-201ENST00000521678 ZNF705FA8MVS1 300 aaPredicted RBP8.2□□□□□ -1.1
IGHV3-60-201ENST00000521678 H3BMM0 161 aa8.2□□□□□ -1.1
IGHV3-60-201ENST00000521678 IFNA21P01568 189 aa8.2□□□□□ -1.1
IGHV3-60-201ENST00000521678 IFNA17P01571 189 aa8.2□□□□□ -1.1
IGHV3-60-201ENST00000521678 ZNF705DP0CH99 300 aaPredicted RBP8.2□□□□□ -1.1
IGHV3-60-201ENST00000521678 ZNF705BP0CI00 300 aaPredicted RBP8.2□□□□□ -1.1
IGHV3-60-201ENST00000521678 RNASE2P10153 161 aaKnown RBP8.2□□□□□ -1.1
IGHV3-60-201ENST00000521678 UCP3P55916 312 aa8.2□□□□□ -1.1
IGHV3-60-201ENST00000521678 IZUMO4Q1ZYL8 232 aa8.2□□□□□ -1.1
IGHV3-60-201ENST00000521678 C16orf54Q6UWD8 224 aa8.2□□□□□ -1.1
IGHV3-60-201ENST00000521678 MRGPRFQ96AM1 343 aa8.2□□□□□ -1.1
IGHV3-60-201ENST00000521678 COMMD3Q9UBI1 195 aa8.2□□□□□ -1.1
IGHV3-60-201ENST00000521678 HELTA6NFD8 242 aa8.19□□□□□ -1.1
IGHV3-60-201ENST00000521678 SMIM9A6NGZ8 99 aa8.19□□□□□ -1.1
IGHV3-60-201ENST00000521678 FAM25AB3EWG3 89 aa8.19□□□□□ -1.1
IGHV3-60-201ENST00000521678 FAM25CB3EWG5 89 aa8.19□□□□□ -1.1
IGHV3-60-201ENST00000521678 FAM25GB3EWG6 89 aa8.19□□□□□ -1.1
IGHV3-60-201ENST00000521678 CORTO00230 105 aa8.19□□□□□ -1.1
IGHV3-60-201ENST00000521678 CDK2AP2O75956 126 aa8.19□□□□□ -1.1
IGHV3-60-201ENST00000521678 IGKV1-5P01602 117 aa8.19□□□□□ -1.1
IGHV3-60-201ENST00000521678 SPART-AS1P0CW21 52 aa8.19□□□□□ -1.1
IGHV3-60-201ENST00000521678 S100GP29377 79 aa8.19□□□□□ -1.1
IGHV3-60-201ENST00000521678 AP2S1P53680 142 aaPredicted RBP8.19□□□□□ -1.1
IGHV3-60-201ENST00000521678 SUB1P53999 127 aaKnown RBP eCLIP8.19□□□□□ -1.1
IGHV3-60-201ENST00000521678 NUTF2P61970 127 aaKnown RBP8.19□□□□□ -1.1
IGHV3-60-201ENST00000521678 DHRS2Q13268 280 aa8.19□□□□□ -1.1
IGHV3-60-201ENST00000521678 BSXQ3C1V8 233 aa8.19□□□□□ -1.1
IGHV3-60-201ENST00000521678 SOHLH1Q5JUK2 328 aa8.19□□□□□ -1.1
IGHV3-60-201ENST00000521678 SAMD12Q8N8I0 201 aa8.19□□□□□ -1.1
IGHV3-60-201ENST00000521678 GLMPQ8WWB7 406 aa8.19□□□□□ -1.1
IGHV3-60-201ENST00000521678 WDR12Q9GZL7 423 aaKnown RBP8.19□□□□□ -1.1
IGHV3-60-201ENST00000521678 XCL2Q9UBD3 114 aa8.19□□□□□ -1.1
IGHV3-60-201ENST00000521678 IGLV2-18A0A075B6J9 118 aa8.18□□□□□ -1.1
IGHV3-60-201ENST00000521678 TRAV30A0A087WSZ9 112 aa8.18□□□□□ -1.1
IGHV3-60-201ENST00000521678 TMEM189A5PLL7 270 aa8.18□□□□□ -1.1
IGHV3-60-201ENST00000521678 PRSS3P35030 304 aa8.18□□□□□ -1.1
IGHV3-60-201ENST00000521678 HRH1P35367 487 aa8.18□□□□□ -1.1
IGHV3-60-201ENST00000521678 ETV6P41212 452 aa8.18□□□□□ -1.1
IGHV3-60-201ENST00000521678 EIF2B2P49770 351 aaKnown RBP8.18□□□□□ -1.1
IGHV3-60-201ENST00000521678 TAS2R20P59543 309 aa8.18□□□□□ -1.1
IGHV3-60-201ENST00000521678 MRPS10P82664 201 aaKnown RBP8.18□□□□□ -1.1
IGHV3-60-201ENST00000521678 OXA1LQ15070 435 aa8.18□□□□□ -1.1
IGHV3-60-201ENST00000521678 SPINK9Q5DT21 86 aa8.18□□□□□ -1.1
IGHV3-60-201ENST00000521678 PSMG4Q5JS54 123 aa8.18□□□□□ -1.1
IGHV3-60-201ENST00000521678 C1orf134Q5TEV5 83 aa8.18□□□□□ -1.1
IGHV3-60-201ENST00000521678 GPX8Q8TED1 209 aa8.18□□□□□ -1.1
IGHV3-60-201ENST00000521678 TMEM230Q96A57 120 aa8.18□□□□□ -1.1
IGHV3-60-201ENST00000521678 PLA2G2EQ9NZK7 142 aa8.18□□□□□ -1.1
IGHV3-60-201ENST00000521678 FAM90A26D6RGX4 464 aa8.17□□□□□ -1.1
IGHV3-60-201ENST00000521678 HLA-DMAP28067 261 aa8.17□□□□□ -1.1
IGHV3-60-201ENST00000521678 YPEL3P61236 119 aaPredicted RBP8.17□□□□□ -1.1
IGHV3-60-201ENST00000521678 TIGITQ495A1 244 aa8.17□□□□□ -1.1
IGHV3-60-201ENST00000521678 TMEM69Q5SWH9 247 aa8.17□□□□□ -1.1
IGHV3-60-201ENST00000521678 DIRAS2Q96HU8 199 aa8.17□□□□□ -1.1
IGHV3-60-201ENST00000521678 NARS2Q96I59 477 aaKnown RBP8.17□□□□□ -1.1
IGHV3-60-201ENST00000521678 CLUHP3Q96NS8 147 aa8.17□□□□□ -1.1
IGHV3-60-201ENST00000521678 DKK2Q9UBU2 259 aa8.17□□□□□ -1.1
IGHV3-60-201ENST00000521678 FABP12A6NFH5 140 aa8.16□□□□□ -1.1
IGHV3-60-201ENST00000521678 BUB3O43684 328 aa8.16□□□□□ -1.1
IGHV3-60-201ENST00000521678 HPGDSO60760 199 aa8.16□□□□□ -1.1
IGHV3-60-201ENST00000521678 HNRNPCP07910 306 aaKnown RBP eCLIP8.16□□□□□ -1.1
IGHV3-60-201ENST00000521678 IGLC1P0CG04 106 aa8.16□□□□□ -1.1
IGHV3-60-201ENST00000521678 HLA-DRB4P13762 266 aa8.16□□□□□ -1.1
IGHV3-60-201ENST00000521678 RND3P61587 244 aa8.16□□□□□ -1.1
IGHV3-60-201ENST00000521678 TSPAN5P62079 268 aa8.16□□□□□ -1.1
IGHV3-60-201ENST00000521678 SNRPD3P62318 126 aaKnown RBP8.16□□□□□ -1.1
IGHV3-60-201ENST00000521678 ZNF846Q147U1 533 aa8.16□□□□□ -1.1
IGHV3-60-201ENST00000521678 AARDQ4LEZ3 155 aa8.16□□□□□ -1.1
IGHV3-60-201ENST00000521678 PRSS54Q6PEW0 395 aa8.16□□□□□ -1.1
IGHV3-60-201ENST00000521678 SLC35G3Q8N808 338 aa8.16□□□□□ -1.1
IGHV3-60-201ENST00000521678 EXTL2Q9UBQ6 330 aa8.16□□□□□ -1.1
IGHV3-60-201ENST00000521678 HLA-DRB4X5D2U9 266 aa8.16□□□□□ -1.1
IGHV3-60-201ENST00000521678 CTDSP2O14595 271 aa8.15□□□□□ -1.1
IGHV3-60-201ENST00000521678 ELK1P19419 428 aa8.15□□□□□ -1.1
IGHV3-60-201ENST00000521678 TNFSF8P32971 234 aa8.15□□□□□ -1.1
IGHV3-60-201ENST00000521678 OPRK1P41145 380 aa8.15□□□□□ -1.1
IGHV3-60-201ENST00000521678 NKX2-1P43699 371 aaPredicted RBP8.15□□□□□ -1.1
IGHV3-60-201ENST00000521678 FAM3BP58499 235 aaPredicted RBP8.15□□□□□ -1.1
IGHV3-60-201ENST00000521678 DHODHQ02127 395 aa8.15□□□□□ -1.1
IGHV3-60-201ENST00000521678 IL18Q14116 193 aa8.15□□□□□ -1.1
IGHV3-60-201ENST00000521678 CCDC190Q86UF4 302 aa8.15□□□□□ -1.1
IGHV3-60-201ENST00000521678 UBE2DNLQ8IWF7 75 aa8.15□□□□□ -1.1
IGHV3-60-201ENST00000521678 OR1S2Q8NGQ3 325 aa8.15□□□□□ -1.1
IGHV3-60-201ENST00000521678 Q8WTZ3 238 aa8.15□□□□□ -1.1
IGHV3-60-201ENST00000521678 NIPSNAP3BQ9BS92 247 aa8.15□□□□□ -1.1
IGHV3-60-201ENST00000521678 SCPEP1Q9HB40 452 aa8.15□□□□□ -1.1
IGHV3-60-201ENST00000521678 NRN1Q9NPD7 142 aa8.15□□□□□ -1.1
IGHV3-60-201ENST00000521678 RFNGQ9Y644 331 aa8.15□□□□□ -1.1
IGHV3-60-201ENST00000521678 TEX48A0A1B0GUV7 120 aa8.14□□□□□ -1.11
IGHV3-60-201ENST00000521678 CTDSPLO15194 276 aa8.14□□□□□ -1.11
IGHV3-60-201ENST00000521678 SCGB2A1O75556 95 aa8.14□□□□□ -1.11
IGHV3-60-201ENST00000521678 HOXA1P49639 335 aaPredicted RBP8.14□□□□□ -1.11
IGHV3-60-201ENST00000521678 EMP1P54849 157 aa8.14□□□□□ -1.11
IGHV3-60-201ENST00000521678 SSBP1Q04837 148 aaKnown RBP8.14□□□□□ -1.11
IGHV3-60-201ENST00000521678 TNP2Q05952 138 aa8.14□□□□□ -1.11
IGHV3-60-201ENST00000521678 USF2Q15853 346 aaPredicted RBP8.14□□□□□ -1.11
IGHV3-60-201ENST00000521678 FAM222AQ5U5X8 452 aa8.14□□□□□ -1.11
IGHV3-60-201ENST00000521678 ZNF486Q96H40 463 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms