RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 OR10J1P30954 320 aa15.44■□□□□ 0.06
TRIM35-203ENST00000521253 ATP5IP56385 69 aaPredicted RBP15.44■□□□□ 0.06
TRIM35-203ENST00000521253 HAGHQ16775 308 aa15.44■□□□□ 0.06
TRIM35-203ENST00000521253 TM2D3Q9BRN9 247 aa15.44■□□□□ 0.06
TRIM35-203ENST00000521253 SRD5A3Q9H8P0 318 aa15.44■□□□□ 0.06
TRIM35-203ENST00000521253 NBEAL2Q6ZNJ1 2754 aa15.44■□□□□ 0.06
TRIM35-203ENST00000521253 MPTX1A8MV57 137 aa15.43■□□□□ 0.06
TRIM35-203ENST00000521253 MED6O75586 246 aa15.43■□□□□ 0.06
TRIM35-203ENST00000521253 APOHP02749 345 aaPredicted RBP15.43■□□□□ 0.06
TRIM35-203ENST00000521253 TCRBP04435 133 aa15.43■□□□□ 0.06
TRIM35-203ENST00000521253 LINC00322Q6ZN03 302 aaPredicted RBP15.43■□□□□ 0.06
TRIM35-203ENST00000521253 OR1S2Q8NGQ3 325 aa15.43■□□□□ 0.06
TRIM35-203ENST00000521253 NPIPB3Q92617 1050 aa15.43■□□□□ 0.06
TRIM35-203ENST00000521253 ACY3Q96HD9 319 aa15.43■□□□□ 0.06
TRIM35-203ENST00000521253 RCHY1Q96PM5 261 aa15.43■□□□□ 0.06
TRIM35-203ENST00000521253 ZMAT4Q9H898 229 aa15.43■□□□□ 0.06
TRIM35-203ENST00000521253 TRAV6A0A075B6T7 132 aa15.42■□□□□ 0.06
TRIM35-203ENST00000521253 RBMY1BA6NDE4 496 aaKnown RBP15.42■□□□□ 0.06
TRIM35-203ENST00000521253 RBMY1EA6NEQ0 496 aaKnown RBP15.42■□□□□ 0.06
TRIM35-203ENST00000521253 SYNGR2O43760 224 aa15.42■□□□□ 0.06
TRIM35-203ENST00000521253 RBMY1DP0C7P1 496 aaKnown RBP15.42■□□□□ 0.06
TRIM35-203ENST00000521253 ST8SIA2Q92186 375 aa15.42■□□□□ 0.06
TRIM35-203ENST00000521253 WWC2-AS2Q96NR7 200 aa15.42■□□□□ 0.06
TRIM35-203ENST00000521253 TBC1D24Q9ULP9 559 aa15.42■□□□□ 0.06
TRIM35-203ENST00000521253 IGHV3-66A0A0C4DH42 116 aa15.41■□□□□ 0.06
TRIM35-203ENST00000521253 IFNA21P01568 189 aa15.41■□□□□ 0.06
TRIM35-203ENST00000521253 LILRB2Q8N423 598 aa15.41■□□□□ 0.06
TRIM35-203ENST00000521253 MITD1Q8WV92 249 aa15.41■□□□□ 0.06
TRIM35-203ENST00000521253 CIB3Q96Q77 187 aaPredicted RBP15.41■□□□□ 0.06
TRIM35-203ENST00000521253 VSIRQ9H7M9 311 aa15.41■□□□□ 0.06
TRIM35-203ENST00000521253 NUDT15Q9NV35 164 aa15.41■□□□□ 0.06
TRIM35-203ENST00000521253 WRBO00258 174 aa15.4■□□□□ 0.06
TRIM35-203ENST00000521253 BMI1P35226 326 aa15.4■□□□□ 0.06
TRIM35-203ENST00000521253 GPX4P36969 197 aaPredicted RBP15.4■□□□□ 0.06
TRIM35-203ENST00000521253 YPEL3P61236 119 aaPredicted RBP15.4■□□□□ 0.06
TRIM35-203ENST00000521253 FAM90A2PQ658T7 463 aa15.4■□□□□ 0.06
TRIM35-203ENST00000521253 METTL26Q96S19 204 aa15.4■□□□□ 0.06
TRIM35-203ENST00000521253 WDR12Q9GZL7 423 aaKnown RBP15.4■□□□□ 0.06
TRIM35-203ENST00000521253 BATF3Q9NR55 127 aa15.4■□□□□ 0.06
TRIM35-203ENST00000521253 PAIP2BQ9ULR5 123 aaKnown RBP15.4■□□□□ 0.06
TRIM35-203ENST00000521253 OR4C46A6NHA9 309 aa15.39■□□□□ 0.05
TRIM35-203ENST00000521253 NPPCP23582 126 aa15.39■□□□□ 0.05
TRIM35-203ENST00000521253 RAB11AP62491 216 aa15.39■□□□□ 0.05
TRIM35-203ENST00000521253 ID3Q02535 119 aa15.39■□□□□ 0.05
TRIM35-203ENST00000521253 GAMTQ14353 236 aa15.39■□□□□ 0.05
TRIM35-203ENST00000521253 ZNF846Q147U1 533 aa15.39■□□□□ 0.05
TRIM35-203ENST00000521253 ODF3L2Q3SX64 289 aa15.39■□□□□ 0.05
TRIM35-203ENST00000521253 TCF24Q7RTU0 167 aa15.39■□□□□ 0.05
TRIM35-203ENST00000521253 OR4D5Q8NGN0 318 aa15.39■□□□□ 0.05
TRIM35-203ENST00000521253 Q8WTZ3 238 aa15.39■□□□□ 0.05
TRIM35-203ENST00000521253 UBQLN2Q9UHD9 624 aa15.39■□□□□ 0.05
TRIM35-203ENST00000521253 IGKV3-7A0A075B6H7 116 aa15.38■□□□□ 0.05
TRIM35-203ENST00000521253 FAM240BA0A1B0GVZ2 78 aa15.38■□□□□ 0.05
TRIM35-203ENST00000521253 CRYBB3P26998 211 aa15.38■□□□□ 0.05
TRIM35-203ENST00000521253 NKX2-1P43699 371 aaPredicted RBP15.38■□□□□ 0.05
TRIM35-203ENST00000521253 POLR2GP62487 172 aaKnown RBP eCLIP15.38■□□□□ 0.05
TRIM35-203ENST00000521253 RPP30P78346 268 aaKnown RBP15.38■□□□□ 0.05
TRIM35-203ENST00000521253 ASAH1Q13510 395 aa15.38■□□□□ 0.05
TRIM35-203ENST00000521253 SLC35E1Q96K37 410 aa15.38■□□□□ 0.05
TRIM35-203ENST00000521253 CITED4Q96RK1 184 aa15.38■□□□□ 0.05
TRIM35-203ENST00000521253 SPATA25Q9BR10 227 aa15.38■□□□□ 0.05
TRIM35-203ENST00000521253 UPK1BO75841 260 aa15.37■□□□□ 0.05
TRIM35-203ENST00000521253 DFFBO76075 338 aa15.37■□□□□ 0.05
TRIM35-203ENST00000521253 TFPI2P48307 235 aa15.37■□□□□ 0.05
TRIM35-203ENST00000521253 IAH1Q2TAA2 248 aaPredicted RBP15.37■□□□□ 0.05
TRIM35-203ENST00000521253 SPANXN5Q5MJ07 72 aa15.37■□□□□ 0.05
TRIM35-203ENST00000521253 MZT2BQ6NZ67 158 aa15.37■□□□□ 0.05
TRIM35-203ENST00000521253 GBGT1Q8N5D6 347 aa15.37■□□□□ 0.05
TRIM35-203ENST00000521253 SEC22CQ9BRL7 303 aa15.37■□□□□ 0.05
TRIM35-203ENST00000521253 A0A1W2PS18 150 aa15.36■□□□□ 0.05
TRIM35-203ENST00000521253 H3BP45 60 aa15.36■□□□□ 0.05
TRIM35-203ENST00000521253 TOMM40O96008 361 aa15.36■□□□□ 0.05
TRIM35-203ENST00000521253 IL4P05112 153 aa15.36■□□□□ 0.05
TRIM35-203ENST00000521253 CD5P06127 495 aa15.36■□□□□ 0.05
TRIM35-203ENST00000521253 H2AFB2P0C5Z0 115 aa15.36■□□□□ 0.05
TRIM35-203ENST00000521253 RD3LP0DJH9 198 aa15.36■□□□□ 0.05
TRIM35-203ENST00000521253 TMEM231Q9H6L2 316 aa15.36■□□□□ 0.05
TRIM35-203ENST00000521253 IGKV1D-37A0A075B6S9 117 aa15.35■□□□□ 0.05
TRIM35-203ENST00000521253 PRSS46E5RG02 174 aa15.35■□□□□ 0.05
TRIM35-203ENST00000521253 SSSCA1O60232 199 aa15.35■□□□□ 0.05
TRIM35-203ENST00000521253 IFITM3Q01628 133 aa15.35■□□□□ 0.05
TRIM35-203ENST00000521253 USF2Q15853 346 aaPredicted RBP15.35■□□□□ 0.05
TRIM35-203ENST00000521253 ZBTB8BQ8NAP8 495 aaPredicted RBP15.35■□□□□ 0.05
TRIM35-203ENST00000521253 ZNF431Q8TF32 576 aaPredicted RBP15.35■□□□□ 0.05
TRIM35-203ENST00000521253 FAM110AQ9BQ89 295 aa15.35■□□□□ 0.05
TRIM35-203ENST00000521253 STRAPQ9Y3F4 350 aaKnown RBP15.35■□□□□ 0.05
TRIM35-203ENST00000521253 U3KQE9 123 aa15.35■□□□□ 0.05
TRIM35-203ENST00000521253 DNAH7Q8WXX0 4024 aa15.34■□□□□ 0.05
TRIM35-203ENST00000521253 ZFP92A6NM28 416 aa15.34■□□□□ 0.05
TRIM35-203ENST00000521253 PSG1P11464 419 aa15.34■□□□□ 0.05
TRIM35-203ENST00000521253 P2RY1P47900 373 aa15.34■□□□□ 0.05
TRIM35-203ENST00000521253 RPL11P62913 178 aaKnown RBP15.34■□□□□ 0.05
TRIM35-203ENST00000521253 PAFAH1B2P68402 229 aa15.34■□□□□ 0.05
TRIM35-203ENST00000521253 NARS2Q96I59 477 aaKnown RBP15.34■□□□□ 0.05
TRIM35-203ENST00000521253 GGTLC1Q9BX51 225 aa15.34■□□□□ 0.05
TRIM35-203ENST00000521253 MS4A6AQ9H2W1 248 aa15.34■□□□□ 0.05
TRIM35-203ENST00000521253 RETNQ9HD89 108 aa15.34■□□□□ 0.05
TRIM35-203ENST00000521253 GSKIPQ9P0R6 139 aa15.34■□□□□ 0.05
TRIM35-203ENST00000521253 LOC102724200A0A096LPH7 203 aaPredicted RBP15.33■□□□□ 0.04
TRIM35-203ENST00000521253 CCSO14618 274 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms