RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 TEAD3Q99594 435 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 RNF126Q9BV68 326 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 C20orf85Q9H1P6 137 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 OR52D1Q9H346 318 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 RERGLQ9H628 205 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 LINC00574Q9H8X3 128 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 SDHAF2Q9NX18 166 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 RASL12Q9NYN1 266 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 A0A0A6YYH2 397 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 TRBV9A0A0B4J1U6 114 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 IGHV1-3A0A0C4DH29 117 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 KBTBD11-OT1A0A1B0GTJ5 212 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 A0A1W2PPV4 95 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 RAB19A4D1S5 217 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 A6NJ64 397 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 IFITM5A6NNB3 132 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 FOXI3A8MTJ6 420 aaPredicted RBP2.66□□□□□ -1.98
VPS13B-208ENST00000521037 BMPR1BO00238 502 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 DEFB4AO15263 64 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 NDUFB6O95139 128 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 MPC2O95563 127 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 IGLV3-1P01715 115 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 SERPINE2P07093 398 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 NMBP08949 121 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 NR2C1P13056 603 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 CXCL3P19876 107 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 BCL3P20749 454 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 VDAC1P21796 283 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 CDK2P24941 298 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 BLVRBP30043 206 aaPredicted RBP2.66□□□□□ -1.98
VPS13B-208ENST00000521037 LEPP41159 167 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 NPBWR2P48146 333 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 GPM6AP51674 278 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 SYNJ2BPP57105 145 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 CTAG1AP78358 180 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 ZNF816Q0VGE8 651 aaPredicted RBP2.66□□□□□ -1.98
VPS13B-208ENST00000521037 OR2F1Q13607 317 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 ZNF345Q14585 488 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 CDK5R1Q15078 307 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 TMEM69Q5SWH9 247 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 ADAMTSL4-AS1Q5T5F5 129 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 HAGHLQ6PII5 290 aaPredicted RBP2.66□□□□□ -1.98
VPS13B-208ENST00000521037 Q6ZSR3 168 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 Q8NAQ8 132 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 OR4A4PQ8NGN8 299 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 OR2K2Q8NGT1 345 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 ZNF596Q8TC21 504 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 THEM6Q8WUY1 208 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 TCTEX1D2Q8WW35 142 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 GHSRQ92847 366 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 LEAP2Q969E1 77 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 RAB3CQ96E17 227 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 REEP6Q96HR9 211 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 PGLYRP3Q96LB9 341 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 RNF2Q99496 336 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 SLC25A21Q9BQT8 299 aaPredicted RBP2.66□□□□□ -1.98
VPS13B-208ENST00000521037 SEC22CQ9BRL7 303 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 OCR1Q9BZK8 76 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 PARP12Q9H0J9 701 aaKnown RBP2.66□□□□□ -1.98
VPS13B-208ENST00000521037 HRASLSQ9HDD0 168 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 IFT46Q9NQC8 304 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 SLC22A13Q9Y226 551 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 SIGLEC7Q9Y286 467 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 PRELID3BQ9Y3B1 194 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 MED31Q9Y3C7 131 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 MPC1Q9Y5U8 109 aa2.66□□□□□ -1.98
VPS13B-208ENST00000521037 IGKV1-27A0A075B6S5 117 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 TRAV41A0A0B4J266 112 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 LOC100131303A0A0U1RQF7 123 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 PQLC2LA1A4F0 135 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 FAM183AA6NL82 134 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 G3V3Q6 166 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 SMLR1H3BR10 107 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 H7C2Y5 167 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 J3QLW9 94 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 SIRPB1O00241 398 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 HSD17B6O14756 317 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 RBBP9O75884 186 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 NDUFB2O95178 105 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 IGHV3-7P01780 117 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 MT-ND4P03905 459 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 GIG44P09565 113 aaPredicted RBP2.65□□□□□ -1.99
VPS13B-208ENST00000521037 CD3GP09693 182 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 SLC25A4P12235 298 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 ZNF19P17023 458 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 HLA-GP17693 338 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 ATF1P18846 271 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 SLC2A5P22732 501 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 PYCR1P32322 319 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 CCR6P51684 374 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 RIDAP52758 137 aaKnown RBP2.65□□□□□ -1.99
VPS13B-208ENST00000521037 TMEM50BP56557 158 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 EDDM3BP56851 147 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 ERVFC1-1P60608 527 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 ACTBP60709 375 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 ZNF146Q15072 292 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 MRPL23Q16540 153 aaKnown RBP2.65□□□□□ -1.99
VPS13B-208ENST00000521037 CEACAM21Q3KPI0 293 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 Q499Y3 187 aa2.65□□□□□ -1.99
VPS13B-208ENST00000521037 TMEM42Q69YG0 159 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms