RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 IGHV3OR16-12A0A075B7B8 117 aa8.7□□□□□ -1.02
TRAPPC9-204ENST00000518723 A0A0B4J293 547 aa8.7□□□□□ -1.02
TRAPPC9-204ENST00000518723 TMEM127O75204 238 aa8.7□□□□□ -1.02
TRAPPC9-204ENST00000518723 IGLC1P0CG04 106 aa8.7□□□□□ -1.02
TRAPPC9-204ENST00000518723 ALDH3B2P48448 385 aa8.7□□□□□ -1.02
TRAPPC9-204ENST00000518723 YPEL3P61236 119 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC9-204ENST00000518723 ZNF709Q8N972 641 aa8.7□□□□□ -1.02
TRAPPC9-204ENST00000518723 OR1S2Q8NGQ3 325 aa8.7□□□□□ -1.02
TRAPPC9-204ENST00000518723 Q8WTZ3 238 aa8.7□□□□□ -1.02
TRAPPC9-204ENST00000518723 NRG4Q8WWG1 115 aa8.7□□□□□ -1.02
TRAPPC9-204ENST00000518723 ATG101Q9BSB4 218 aa8.7□□□□□ -1.02
TRAPPC9-204ENST00000518723 LOC102723971A0A1B0GUV8 181 aa8.69□□□□□ -1.02
TRAPPC9-204ENST00000518723 IGKV1-5P01602 117 aa8.69□□□□□ -1.02
TRAPPC9-204ENST00000518723 HBE1P02100 147 aa8.69□□□□□ -1.02
TRAPPC9-204ENST00000518723 PSMB9P28065 219 aa8.69□□□□□ -1.02
TRAPPC9-204ENST00000518723 HRH1P35367 487 aa8.69□□□□□ -1.02
TRAPPC9-204ENST00000518723 UCP3P55916 312 aa8.69□□□□□ -1.02
TRAPPC9-204ENST00000518723 GABARAPL2P60520 117 aa8.69□□□□□ -1.02
TRAPPC9-204ENST00000518723 DAD1P61803 113 aa8.69□□□□□ -1.02
TRAPPC9-204ENST00000518723 GDF5OSQ5U4N7 250 aa8.69□□□□□ -1.02
TRAPPC9-204ENST00000518723 SIGLEC15Q6ZMC9 328 aa8.69□□□□□ -1.02
TRAPPC9-204ENST00000518723 SPATA12Q7Z6I5 190 aa8.69□□□□□ -1.02
TRAPPC9-204ENST00000518723 LYSMD2Q8IV50 215 aa8.69□□□□□ -1.02
TRAPPC9-204ENST00000518723 SAV1Q9H4B6 383 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC9-204ENST00000518723 GOLT1BQ9Y3E0 138 aa8.69□□□□□ -1.02
TRAPPC9-204ENST00000518723 YTHDF2Q9Y5A9 579 aaKnown RBP8.69□□□□□ -1.02
TRAPPC9-204ENST00000518723 RPS10-NUDT3A0A1W2PQS6 291 aa8.68□□□□□ -1.02
TRAPPC9-204ENST00000518723 BUB3O43684 328 aa8.68□□□□□ -1.02
TRAPPC9-204ENST00000518723 GSTZ1O43708 216 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC9-204ENST00000518723 FXYD7P58549 80 aa8.68□□□□□ -1.02
TRAPPC9-204ENST00000518723 TAS2R20P59543 309 aa8.68□□□□□ -1.02
TRAPPC9-204ENST00000518723 DHODHQ02127 395 aa8.68□□□□□ -1.02
TRAPPC9-204ENST00000518723 USF2Q15853 346 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC9-204ENST00000518723 GSG1LQ6UXU4 331 aa8.68□□□□□ -1.02
TRAPPC9-204ENST00000518723 FOXI2Q6ZQN5 318 aa8.68□□□□□ -1.02
TRAPPC9-204ENST00000518723 FCGR1BQ92637 280 aa8.68□□□□□ -1.02
TRAPPC9-204ENST00000518723 S100A16Q96FQ6 103 aaKnown RBP8.68□□□□□ -1.02
TRAPPC9-204ENST00000518723 PDCD10Q9BUL8 212 aa8.68□□□□□ -1.02
TRAPPC9-204ENST00000518723 IGKV3-20P01619 116 aa8.67□□□□□ -1.02
TRAPPC9-204ENST00000518723 IL4P05112 153 aa8.67□□□□□ -1.02
TRAPPC9-204ENST00000518723 SLC25A4P12235 298 aa8.67□□□□□ -1.02
TRAPPC9-204ENST00000518723 HLA-DMAP28067 261 aa8.67□□□□□ -1.02
TRAPPC9-204ENST00000518723 OR10J1P30954 320 aa8.67□□□□□ -1.02
TRAPPC9-204ENST00000518723 ETV6P41212 452 aa8.67□□□□□ -1.02
TRAPPC9-204ENST00000518723 HSPA13P48723 471 aa8.67□□□□□ -1.02
TRAPPC9-204ENST00000518723 RND2P52198 227 aa8.67□□□□□ -1.02
TRAPPC9-204ENST00000518723 RND3P61587 244 aa8.67□□□□□ -1.02
TRAPPC9-204ENST00000518723 TSPAN5P62079 268 aa8.67□□□□□ -1.02
TRAPPC9-204ENST00000518723 RRN3P1Q2M238 152 aa8.67□□□□□ -1.02
TRAPPC9-204ENST00000518723 TMEM69Q5SWH9 247 aa8.67□□□□□ -1.02
TRAPPC9-204ENST00000518723 SPATA31B1PQ5VZV4 182 aa8.67□□□□□ -1.02
TRAPPC9-204ENST00000518723 PRSS54Q6PEW0 395 aa8.67□□□□□ -1.02
TRAPPC9-204ENST00000518723 SPARTQ8N0X7 666 aa8.67□□□□□ -1.02
TRAPPC9-204ENST00000518723 C1orf158Q8N1D5 194 aa8.67□□□□□ -1.02
TRAPPC9-204ENST00000518723 CNBD2Q96M20 576 aa8.67□□□□□ -1.02
TRAPPC9-204ENST00000518723 SCPEP1Q9HB40 452 aa8.67□□□□□ -1.02
TRAPPC9-204ENST00000518723 ENY2Q9NPA8 101 aa8.67□□□□□ -1.02
TRAPPC9-204ENST00000518723 MYCBP2O75592 4640 aa8.67□□□□□ -1.02
TRAPPC9-204ENST00000518723 FAT1Q14517 4588 aa8.66□□□□□ -1.02
TRAPPC9-204ENST00000518723 ATG12O94817 140 aa8.66□□□□□ -1.02
TRAPPC9-204ENST00000518723 PRSS3P35030 304 aa8.66□□□□□ -1.02
TRAPPC9-204ENST00000518723 AKR1C2P52895 323 aa8.66□□□□□ -1.02
TRAPPC9-204ENST00000518723 DEFB1P60022 68 aa8.66□□□□□ -1.02
TRAPPC9-204ENST00000518723 ZNF79Q15937 498 aa8.66□□□□□ -1.02
TRAPPC9-204ENST00000518723 UBE2NLQ5JXB2 153 aa8.66□□□□□ -1.02
TRAPPC9-204ENST00000518723 SLC35B3Q9H1N7 401 aa8.66□□□□□ -1.02
TRAPPC9-204ENST00000518723 EPM2AB3EWF7 344 aa8.65□□□□□ -1.02
TRAPPC9-204ENST00000518723 TOMM40O96008 361 aa8.65□□□□□ -1.02
TRAPPC9-204ENST00000518723 NUP62P37198 522 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC9-204ENST00000518723 ID1P41134 155 aa8.65□□□□□ -1.02
TRAPPC9-204ENST00000518723 HTR2BP41595 481 aa8.65□□□□□ -1.02
TRAPPC9-204ENST00000518723 PSMB3P49720 205 aa8.65□□□□□ -1.02
TRAPPC9-204ENST00000518723 PAX9P55771 341 aa8.65□□□□□ -1.02
TRAPPC9-204ENST00000518723 PSG9Q00887 426 aa8.65□□□□□ -1.02
TRAPPC9-204ENST00000518723 AARDQ4LEZ3 155 aa8.65□□□□□ -1.02
TRAPPC9-204ENST00000518723 OR4B1Q8NGF8 309 aa8.65□□□□□ -1.02
TRAPPC9-204ENST00000518723 RNASEH2CQ8TDP1 164 aaKnown RBP8.65□□□□□ -1.02
TRAPPC9-204ENST00000518723 GPX8Q8TED1 209 aa8.65□□□□□ -1.02
TRAPPC9-204ENST00000518723 ZNF486Q96H40 463 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC9-204ENST00000518723 C7orf50Q9BRJ6 194 aaKnown RBP8.65□□□□□ -1.02
TRAPPC9-204ENST00000518723 LOC100506127A0A0U1RQW1 187 aa8.64□□□□□ -1.03
TRAPPC9-204ENST00000518723 LYRM9A8MSI8 78 aa8.64□□□□□ -1.03
TRAPPC9-204ENST00000518723 SOCS3O14543 225 aa8.64□□□□□ -1.03
TRAPPC9-204ENST00000518723 RD3LP0DJH9 198 aa8.64□□□□□ -1.03
TRAPPC9-204ENST00000518723 BTF3P20290 206 aaKnown RBP8.64□□□□□ -1.03
TRAPPC9-204ENST00000518723 RORCP51449 518 aa8.64□□□□□ -1.03
TRAPPC9-204ENST00000518723 CCL18P55774 89 aa8.64□□□□□ -1.03
TRAPPC9-204ENST00000518723 KRTAP10-2P60368 255 aa8.64□□□□□ -1.03
TRAPPC9-204ENST00000518723 SPCS3P61009 180 aa8.64□□□□□ -1.03
TRAPPC9-204ENST00000518723 C2orf83Q53S99 150 aa8.64□□□□□ -1.03
TRAPPC9-204ENST00000518723 CROCCP3Q8IVE0 287 aa8.64□□□□□ -1.03
TRAPPC9-204ENST00000518723 LINC00052Q96N35 136 aa8.64□□□□□ -1.03
TRAPPC9-204ENST00000518723 TP53RKQ96S44 253 aa8.64□□□□□ -1.03
TRAPPC9-204ENST00000518723 WDR12Q9GZL7 423 aaKnown RBP8.64□□□□□ -1.03
TRAPPC9-204ENST00000518723 KLK11Q9UBX7 282 aa8.64□□□□□ -1.03
TRAPPC9-204ENST00000518723 LINC00588Q9Y4M8 146 aa8.64□□□□□ -1.03
TRAPPC9-204ENST00000518723 A0A0G2JRQ6 117 aa8.63□□□□□ -1.03
TRAPPC9-204ENST00000518723 A8MTW9 85 aa8.63□□□□□ -1.03
TRAPPC9-204ENST00000518723 NXPH3O95157 252 aa8.63□□□□□ -1.03
TRAPPC9-204ENST00000518723 FAM78BQ5VT40 261 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms