RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 ZNF562Q6V9R5 426 aa18.5■□□□□ 0.55
SLIT3-204ENST00000518140 KRTAP1-3Q8IUG1 177 aa18.5■□□□□ 0.55
SLIT3-204ENST00000518140 MRPL41Q8IXM3 137 aaKnown RBP18.5■□□□□ 0.55
SLIT3-204ENST00000518140 LRRC75A-AS1Q8N1F1 130 aa18.5■□□□□ 0.55
SLIT3-204ENST00000518140 OR1P1Q8NH06 330 aa18.5■□□□□ 0.55
SLIT3-204ENST00000518140 NPIPB3Q92617 1050 aa18.5■□□□□ 0.55
SLIT3-204ENST00000518140 PIFOQ8TCI5 191 aa18.5■□□□□ 0.55
SLIT3-204ENST00000518140 SLC25A33Q9BSK2 321 aa18.5■□□□□ 0.55
SLIT3-204ENST00000518140 URGCP-MRPS24S4R325 110 aa18.5■□□□□ 0.55
SLIT3-204ENST00000518140 TGIF2-C20orf24A0A0A6YYL0 155 aa18.49■□□□□ 0.55
SLIT3-204ENST00000518140 LOXL1Q08397 574 aaPredicted RBP18.49■□□□□ 0.55
SLIT3-204ENST00000518140 ASPHD1Q5U4P2 390 aa18.49■□□□□ 0.55
SLIT3-204ENST00000518140 SLC35E1Q96K37 410 aa18.49■□□□□ 0.55
SLIT3-204ENST00000518140 ACTR3CQ9C0K3 210 aaPredicted RBP18.49■□□□□ 0.55
SLIT3-204ENST00000518140 WNT10AQ9GZT5 417 aa18.49■□□□□ 0.55
SLIT3-204ENST00000518140 TMEM242Q9NWH2 141 aa18.49■□□□□ 0.55
SLIT3-204ENST00000518140 ZFP92A6NM28 416 aa18.48■□□□□ 0.55
SLIT3-204ENST00000518140 TGFAP01135 160 aa18.48■□□□□ 0.55
SLIT3-204ENST00000518140 RPL29P47914 159 aaKnown RBP18.48■□□□□ 0.55
SLIT3-204ENST00000518140 NDUFA6P56556 154 aa18.48■□□□□ 0.55
SLIT3-204ENST00000518140 PRR20EP86478 221 aa18.48■□□□□ 0.55
SLIT3-204ENST00000518140 PRR20CP86479 221 aa18.48■□□□□ 0.55
SLIT3-204ENST00000518140 PRR20DP86480 221 aa18.48■□□□□ 0.55
SLIT3-204ENST00000518140 PRR20BP86481 221 aa18.48■□□□□ 0.55
SLIT3-204ENST00000518140 PRR20AP86496 221 aa18.48■□□□□ 0.55
SLIT3-204ENST00000518140 RAB31Q13636 194 aa18.48■□□□□ 0.55
SLIT3-204ENST00000518140 DOK5Q9P104 306 aa18.48■□□□□ 0.55
SLIT3-204ENST00000518140 GCN1Q92616 2671 aaKnown RBP18.48■□□□□ 0.55
SLIT3-204ENST00000518140 CTXND1A0A1B0GTU2 59 aa18.48■□□□□ 0.55
SLIT3-204ENST00000518140 SH2D7A6NKC9 451 aaPredicted RBP18.48■□□□□ 0.55
SLIT3-204ENST00000518140 PRRC2AP48634 2157 aaKnown RBP18.47■□□□□ 0.55
SLIT3-204ENST00000518140 CYB5BO43169 146 aa18.47■□□□□ 0.55
SLIT3-204ENST00000518140 EGR2P11161 476 aaPredicted RBP18.47■□□□□ 0.55
SLIT3-204ENST00000518140 TMEM219Q86XT9 240 aa18.47■□□□□ 0.55
SLIT3-204ENST00000518140 ARPC1AQ92747 370 aa18.47■□□□□ 0.55
SLIT3-204ENST00000518140 Q96MF0 132 aa18.47■□□□□ 0.55
SLIT3-204ENST00000518140 HSPB9Q9BQS6 159 aa18.47■□□□□ 0.55
SLIT3-204ENST00000518140 IGHV7-81A0A0B4J1V7 117 aa18.46■□□□□ 0.55
SLIT3-204ENST00000518140 CRYGCP07315 174 aa18.46■□□□□ 0.55
SLIT3-204ENST00000518140 SRSF8Q9BRL6 282 aaKnown RBP18.46■□□□□ 0.55
SLIT3-204ENST00000518140 MEGF9Q9H1U4 602 aa18.46■□□□□ 0.55
SLIT3-204ENST00000518140 IGKV1D-37A0A075B6S9 117 aa18.46■□□□□ 0.55
SLIT3-204ENST00000518140 CDC34P49427 236 aaPredicted RBP18.46■□□□□ 0.55
SLIT3-204ENST00000518140 RND2P52198 227 aa18.46■□□□□ 0.55
SLIT3-204ENST00000518140 VAX2Q9UIW0 290 aa18.46■□□□□ 0.55
SLIT3-204ENST00000518140 SEC14L6B5MCN3 397 aa18.45■□□□□ 0.54
SLIT3-204ENST00000518140 MT-CO2P00403 227 aa18.45■□□□□ 0.54
SLIT3-204ENST00000518140 IGHV4-31P0DP07 118 aa18.45■□□□□ 0.54
SLIT3-204ENST00000518140 SPATA31B1PQ5VZV4 182 aa18.45■□□□□ 0.54
SLIT3-204ENST00000518140 MBD6Q96DN6 1003 aa18.45■□□□□ 0.54
SLIT3-204ENST00000518140 SDF2L1Q9HCN8 221 aa18.45■□□□□ 0.54
SLIT3-204ENST00000518140 C1RLQ9NZP8 487 aa18.45■□□□□ 0.54
SLIT3-204ENST00000518140 ZNF469Q96JG9 3925 aaPredicted RBP18.45■□□□□ 0.54
SLIT3-204ENST00000518140 IFITM10A6NMD0 228 aa18.45■□□□□ 0.54
SLIT3-204ENST00000518140 GATA3P23771 443 aa18.45■□□□□ 0.54
SLIT3-204ENST00000518140 ZNF90Q03938 601 aa18.45■□□□□ 0.54
SLIT3-204ENST00000518140 PMS2P11Q13670 270 aa18.45■□□□□ 0.54
SLIT3-204ENST00000518140 SEPSECSQ9HD40 501 aaKnown RBP18.45■□□□□ 0.54
SLIT3-204ENST00000518140 CLDN34H7C241 214 aa18.44■□□□□ 0.54
SLIT3-204ENST00000518140 HIST1H2BKO60814 126 aa18.44■□□□□ 0.54
SLIT3-204ENST00000518140 IFNA1P01562 189 aa18.44■□□□□ 0.54
SLIT3-204ENST00000518140 HIST1H2BJP06899 126 aa18.44■□□□□ 0.54
SLIT3-204ENST00000518140 HIST1H2BOP23527 126 aa18.44■□□□□ 0.54
SLIT3-204ENST00000518140 HIST1H2BBP33778 126 aa18.44■□□□□ 0.54
SLIT3-204ENST00000518140 HIST1H2BDP58876 126 aa18.44■□□□□ 0.54
SLIT3-204ENST00000518140 HIST1H2BCP62807 126 aa18.44■□□□□ 0.54
SLIT3-204ENST00000518140 HIST2H2BEQ16778 126 aa18.44■□□□□ 0.54
SLIT3-204ENST00000518140 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.44■□□□□ 0.54
SLIT3-204ENST00000518140 GATAD1Q8WUU5 269 aa18.44■□□□□ 0.54
SLIT3-204ENST00000518140 HIST1H2BHQ93079 126 aa18.44■□□□□ 0.54
SLIT3-204ENST00000518140 HIST1H2BNQ99877 126 aa18.44■□□□□ 0.54
SLIT3-204ENST00000518140 HIST1H2BMQ99879 126 aa18.44■□□□□ 0.54
SLIT3-204ENST00000518140 SSX3Q99909 188 aa18.44■□□□□ 0.54
SLIT3-204ENST00000518140 RASL11BQ9BPW5 248 aa18.44■□□□□ 0.54
SLIT3-204ENST00000518140 GSX1Q9H4S2 264 aaPredicted RBP18.44■□□□□ 0.54
SLIT3-204ENST00000518140 CR1P17927 2039 aa18.44■□□□□ 0.54
SLIT3-204ENST00000518140 LINC01548A6NM66 108 aa18.43■□□□□ 0.54
SLIT3-204ENST00000518140 TGOLN2O43493 480 aa18.43■□□□□ 0.54
SLIT3-204ENST00000518140 TMEM249Q2WGJ8 235 aa18.43■□□□□ 0.54
SLIT3-204ENST00000518140 GAR1Q9NY12 217 aaKnown RBP18.43■□□□□ 0.54
SLIT3-204ENST00000518140 A0A1W2PPV4 95 aa18.43■□□□□ 0.54
SLIT3-204ENST00000518140 I3L2K1 104 aa18.43■□□□□ 0.54
SLIT3-204ENST00000518140 TRGC2P03986 189 aa18.43■□□□□ 0.54
SLIT3-204ENST00000518140 S100A2P29034 98 aa18.43■□□□□ 0.54
SLIT3-204ENST00000518140 CYP2G1PQ6ZSU1 146 aa18.43■□□□□ 0.54
SLIT3-204ENST00000518140 FAM210BQ96KR6 192 aa18.43■□□□□ 0.54
SLIT3-204ENST00000518140 KCNIP2Q9NS61 270 aa18.43■□□□□ 0.54
SLIT3-204ENST00000518140 SOX15O60248 233 aa18.42■□□□□ 0.54
SLIT3-204ENST00000518140 HLA-DRB1P01911 266 aa18.42■□□□□ 0.54
SLIT3-204ENST00000518140 THAP8Q8NA92 274 aa18.42■□□□□ 0.54
SLIT3-204ENST00000518140 CCDC168Q8NDH2 2452 aa18.42■□□□□ 0.54
SLIT3-204ENST00000518140 ETFRF1Q6IPR1 90 aa18.42■□□□□ 0.54
SLIT3-204ENST00000518140 SPNS3Q6ZMD2 512 aa18.42■□□□□ 0.54
SLIT3-204ENST00000518140 OR5T1Q8NG75 326 aa18.42■□□□□ 0.54
SLIT3-204ENST00000518140 BCL6BQ8N143 479 aaPredicted RBP18.41■□□□□ 0.54
SLIT3-204ENST00000518140 CTDSP1Q9GZU7 261 aa18.41■□□□□ 0.54
SLIT3-204ENST00000518140 CREBBPQ92793 2442 aa18.41■□□□□ 0.54
SLIT3-204ENST00000518140 PDZD2O15018 2839 aa18.4■□□□□ 0.54
SLIT3-204ENST00000518140 ELOA3CA0A087WX78 387 aaPredicted RBP18.4■□□□□ 0.54
SLIT3-204ENST00000518140 MDFIC2A0A1B0GVS7 189 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms