RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 DKK2Q9UBU2 259 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 FUT9Q9Y231 359 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 PRELID1Q9Y255 219 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 HILPDAQ9Y5L2 63 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 PUS1Q9Y606 427 aaKnown RBP eCLIP4.66□□□□□ -1.66
CD47-205ENST00000517766 F11RQ9Y624 299 aaKnown RBP4.66□□□□□ -1.66
CD47-205ENST00000517766 ARL2-SNX15V9GYD0 113 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 SPTBN1Q01082 2364 aaKnown RBP4.66□□□□□ -1.66
CD47-205ENST00000517766 ATRXP46100 2492 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 PIEZO1Q92508 2521 aa4.66□□□□□ -1.66
CD47-205ENST00000517766 A0A087WWC5 75 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 TCRBV4S1A1TA0A5B7 111 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 ZNF727A8MUV8 499 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 HMGB3O15347 200 aaKnown RBP4.65□□□□□ -1.67
CD47-205ENST00000517766 NUPL2O15504 423 aaKnown RBP4.65□□□□□ -1.67
CD47-205ENST00000517766 PDE6DO43924 150 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 CNIH1O95406 144 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 CRYGCP07315 174 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 LINC00869P0C866 280 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 FAM106CPP0CH98 169 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 COX6B1P14854 86 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 CEBPGP53567 150 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 ATP5J2P56134 94 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 BPIFB3P59826 476 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 CD81P60033 236 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 GNB1P62873 340 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 PRB3Q04118 309 aaPredicted RBP4.65□□□□□ -1.67
CD47-205ENST00000517766 HES1Q14469 280 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 SSX2Q16385 188 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 AKIRIN2Q53H80 203 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 C10orf55Q5SWW7 151 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 LDLRAD2Q5SZI1 272 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 FAM78BQ5VT40 261 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 FAM90A2PQ658T7 463 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 SPNS3Q6ZMD2 512 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 PQLC2Q6ZP29 291 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 LHFPL4Q7Z7J7 247 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 IQCF2Q8IXL9 164 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 ZNF843Q8N446 348 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 OR4F5Q8NH21 305 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 C10orf105Q8TEF2 133 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 ABHD5Q8WTS1 349 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 OR4F4Q96R69 305 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 TBX15Q96SF7 602 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 TRGV9Q99603 122 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 KRTAP3-1Q9BYR8 98 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 NAT8Q9UHE5 227 aa4.65□□□□□ -1.67
CD47-205ENST00000517766 PLXNB1O43157 2135 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 NCOR2Q9Y618 2525 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 IGKV1OR2-108A0A075B7D4 117 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 A0A1W2PRD5 423 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 A0A1W2PRF3 423 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 A0A1W2PRM7 423 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 CXorf65A6NEN9 183 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 TEX22C9J3V5 150 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 C11orf94C9JXX5 98 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 PAGE4O60829 102 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 FABP1P07148 127 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 OR5G3P0C626 314 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 ARL14EPLP0DKL9 152 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 AREGP15514 252 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 SLC25A16P16260 332 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 TMEM11P17152 192 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 CTRB1P17538 263 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 GCHFRP30047 84 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 PAX8Q06710 450 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 FXYD3Q14802 87 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 TMEM241Q24JQ0 296 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 C5orf64Q2M2E5 130 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 RNF212Q495C1 297 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 GCSAMLQ5JQS6 135 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 CTRB2Q6GPI1 263 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 TMEM88Q6PEY1 159 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 ZNF562Q6V9R5 426 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 CBLN2Q8IUK8 224 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 Q8N6K4 173 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 TMEM116Q8NCL8 245 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 OR2T6Q8NHC8 308 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 NPIPB3Q92617 1050 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 ACY3Q96HD9 319 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 BBC3Q96PG8 261 aaPredicted RBP4.64□□□□□ -1.67
CD47-205ENST00000517766 UHRF2Q96PU4 802 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 C20orf24Q9BUV8 137 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 CTDSP1Q9GZU7 261 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 FNDC4Q9H6D8 234 aaPredicted RBP4.64□□□□□ -1.67
CD47-205ENST00000517766 SDF2L1Q9HCN8 221 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 DNAJC4Q9NNZ3 241 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 TMEM242Q9NWH2 141 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 NBASA2RRP1 2371 aa4.64□□□□□ -1.67
CD47-205ENST00000517766 IGKV1D-37A0A075B6S9 117 aa4.63□□□□□ -1.67
CD47-205ENST00000517766 TRAV30A0A087WSZ9 112 aa4.63□□□□□ -1.67
CD47-205ENST00000517766 NCBP2LA6PVI3 153 aaKnown RBP4.63□□□□□ -1.67
CD47-205ENST00000517766 NPIPB5A8MRT5 1133 aa4.63□□□□□ -1.67
CD47-205ENST00000517766 AP4M1O00189 453 aa4.63□□□□□ -1.67
CD47-205ENST00000517766 FCN1O00602 326 aa4.63□□□□□ -1.67
CD47-205ENST00000517766 NPFFO15130 113 aa4.63□□□□□ -1.67
CD47-205ENST00000517766 COX7A2P2O60397 106 aa4.63□□□□□ -1.67
CD47-205ENST00000517766 SCGB2A1O75556 95 aa4.63□□□□□ -1.67
CD47-205ENST00000517766 OR2C1O95371 312 aa4.63□□□□□ -1.67
CD47-205ENST00000517766 MT-ND4LP03901 98 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms