RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 TRGV1A0A0A0MS02 117 aa-3.92□□□□□ -3.04
RNU6-539P-201ENST00000516665 LSM1O15116 133 aaKnown RBP-3.92□□□□□ -3.04
RNU6-539P-201ENST00000516665 KDELR3O43731 214 aa-3.92□□□□□ -3.04
RNU6-539P-201ENST00000516665 VAPBO95292 243 aa-3.92□□□□□ -3.04
RNU6-539P-201ENST00000516665 FTH1P02794 183 aa-3.92□□□□□ -3.04
RNU6-539P-201ENST00000516665 HMOX2P30519 316 aa-3.92□□□□□ -3.04
RNU6-539P-201ENST00000516665 DSCR4P56555 118 aaPredicted RBP-3.92□□□□□ -3.04
RNU6-539P-201ENST00000516665 UBE2HP62256 183 aa-3.92□□□□□ -3.04
RNU6-539P-201ENST00000516665 POLR2GP62487 172 aaKnown RBP eCLIP-3.92□□□□□ -3.04
RNU6-539P-201ENST00000516665 RPL23AP62750 156 aaKnown RBP-3.92□□□□□ -3.04
RNU6-539P-201ENST00000516665 IQCJQ1A5X6 159 aa-3.92□□□□□ -3.04
RNU6-539P-201ENST00000516665 DUPD1Q68J44 220 aa-3.92□□□□□ -3.04
RNU6-539P-201ENST00000516665 OR5AS1Q8N127 324 aa-3.92□□□□□ -3.04
RNU6-539P-201ENST00000516665 NATD1Q8N6N6 113 aa-3.92□□□□□ -3.04
RNU6-539P-201ENST00000516665 SIGLECL1Q8N7X8 197 aa-3.92□□□□□ -3.04
RNU6-539P-201ENST00000516665 C5orf17Q8NAS9 161 aa-3.92□□□□□ -3.04
RNU6-539P-201ENST00000516665 OR4K17Q8NGC6 315 aa-3.92□□□□□ -3.04
RNU6-539P-201ENST00000516665 PBOV1Q9GZY1 135 aa-3.92□□□□□ -3.04
RNU6-539P-201ENST00000516665 SLC22A4Q9H015 551 aa-3.92□□□□□ -3.04
RNU6-539P-201ENST00000516665 NHP2Q9NX24 153 aaKnown RBP-3.92□□□□□ -3.04
RNU6-539P-201ENST00000516665 MGAT4DA6NG13 374 aa-3.93□□□□□ -3.04
RNU6-539P-201ENST00000516665 IFNB1P01574 187 aa-3.93□□□□□ -3.04
RNU6-539P-201ENST00000516665 IGHV3-33P01772 117 aa-3.93□□□□□ -3.04
RNU6-539P-201ENST00000516665 PRM2P04554 102 aa-3.93□□□□□ -3.04
RNU6-539P-201ENST00000516665 APODP05090 189 aa-3.93□□□□□ -3.04
RNU6-539P-201ENST00000516665 GP1BAP07359 652 aa-3.93□□□□□ -3.04
RNU6-539P-201ENST00000516665 ARR3P36575 388 aa-3.93□□□□□ -3.04
RNU6-539P-201ENST00000516665 PSMC5P62195 406 aa-3.93□□□□□ -3.04
RNU6-539P-201ENST00000516665 C1DQ13901 141 aaKnown RBP-3.93□□□□□ -3.04
RNU6-539P-201ENST00000516665 CFAP157Q5JU67 520 aa-3.93□□□□□ -3.04
RNU6-539P-201ENST00000516665 C8orf74Q6P047 294 aa-3.93□□□□□ -3.04
RNU6-539P-201ENST00000516665 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-3.93□□□□□ -3.04
RNU6-539P-201ENST00000516665 MIR17HGQ75NE6 70 aa-3.93□□□□□ -3.04
RNU6-539P-201ENST00000516665 OR2Y1Q8NGV0 311 aa-3.93□□□□□ -3.04
RNU6-539P-201ENST00000516665 H1FXQ92522 213 aaKnown RBP-3.93□□□□□ -3.04
RNU6-539P-201ENST00000516665 FAM186AA6NE01 2351 aa-3.94□□□□□ -3.04
RNU6-539P-201ENST00000516665 SCN8AQ9UQD0 1980 aa-3.94□□□□□ -3.04
RNU6-539P-201ENST00000516665 TEX46H3BTG2 121 aa-3.94□□□□□ -3.04
RNU6-539P-201ENST00000516665 NDUFS8O00217 210 aa-3.94□□□□□ -3.04
RNU6-539P-201ENST00000516665 GADD45GO95257 159 aa-3.94□□□□□ -3.04
RNU6-539P-201ENST00000516665 SNAP29O95721 258 aa-3.94□□□□□ -3.04
RNU6-539P-201ENST00000516665 UBCP0CG48 685 aaKnown RBP-3.94□□□□□ -3.04
RNU6-539P-201ENST00000516665 CASQ1P31415 396 aa-3.94□□□□□ -3.04
RNU6-539P-201ENST00000516665 DNAJC3Q13217 504 aa-3.94□□□□□ -3.04
RNU6-539P-201ENST00000516665 GNA13Q14344 377 aa-3.94□□□□□ -3.04
RNU6-539P-201ENST00000516665 OR5D14Q8NGL3 314 aa-3.94□□□□□ -3.04
RNU6-539P-201ENST00000516665 SLC37A2Q8TED4 501 aa-3.94□□□□□ -3.04
RNU6-539P-201ENST00000516665 DOK4Q8TEW6 326 aa-3.94□□□□□ -3.04
RNU6-539P-201ENST00000516665 FBXO32Q969P5 355 aa-3.94□□□□□ -3.04
RNU6-539P-201ENST00000516665 GSDMAQ96QA5 445 aa-3.94□□□□□ -3.04
RNU6-539P-201ENST00000516665 UGT2B28Q9BY64 529 aa-3.94□□□□□ -3.04
RNU6-539P-201ENST00000516665 MAF1Q9H063 256 aa-3.94□□□□□ -3.04
RNU6-539P-201ENST00000516665 AGPAT4-IT1Q9H0P7 198 aa-3.94□□□□□ -3.04
RNU6-539P-201ENST00000516665 MYH16Q9H6N6 1097 aa-3.94□□□□□ -3.04
RNU6-539P-201ENST00000516665 ZC4H2Q9NQZ6 224 aa-3.94□□□□□ -3.04
RNU6-539P-201ENST00000516665 MOSPD1Q9UJG1 213 aa-3.94□□□□□ -3.04
RNU6-539P-201ENST00000516665 PCYT1BQ9Y5K3 369 aaPredicted RBP-3.94□□□□□ -3.04
RNU6-539P-201ENST00000516665 SLC2A3P11169 496 aa-3.95□□□□□ -3.04
RNU6-539P-201ENST00000516665 IL24Q13007 206 aa-3.95□□□□□ -3.04
RNU6-539P-201ENST00000516665 SCD5Q86SK9 330 aa-3.95□□□□□ -3.04
RNU6-539P-201ENST00000516665 UBE2J2Q8N2K1 259 aa-3.95□□□□□ -3.04
RNU6-539P-201ENST00000516665 TERB2Q8NHR7 220 aa-3.95□□□□□ -3.04
RNU6-539P-201ENST00000516665 ADAT3Q96EY9 351 aaPredicted RBP-3.95□□□□□ -3.04
RNU6-539P-201ENST00000516665 CATSPER2Q96P56 530 aa-3.95□□□□□ -3.04
RNU6-539P-201ENST00000516665 DERL1Q9BUN8 251 aa-3.95□□□□□ -3.04
RNU6-539P-201ENST00000516665 TMEM109Q9BVC6 243 aa-3.95□□□□□ -3.04
RNU6-539P-201ENST00000516665 HRASLSQ9HDD0 168 aa-3.95□□□□□ -3.04
RNU6-539P-201ENST00000516665 BIN3Q9NQY0 253 aa-3.95□□□□□ -3.04
RNU6-539P-201ENST00000516665 POLE3Q9NRF9 147 aa-3.95□□□□□ -3.04
RNU6-539P-201ENST00000516665 UBAP1Q9NZ09 502 aa-3.95□□□□□ -3.04
RNU6-539P-201ENST00000516665 ARHGEF11O15085 1522 aa-3.95□□□□□ -3.04
RNU6-539P-201ENST00000516665 CASKIN1Q8WXD9 1431 aa-3.95□□□□□ -3.04
RNU6-539P-201ENST00000516665 DSPPQ9NZW4 1301 aa-3.95□□□□□ -3.04
RNU6-539P-201ENST00000516665 GOLGA8TH3BQL2 631 aa-3.96□□□□□ -3.04
RNU6-539P-201ENST00000516665 LST1O00453 97 aa-3.96□□□□□ -3.04
RNU6-539P-201ENST00000516665 AZIN1O14977 448 aa-3.96□□□□□ -3.04
RNU6-539P-201ENST00000516665 HBZP02008 142 aa-3.96□□□□□ -3.04
RNU6-539P-201ENST00000516665 SRP19P09132 144 aaKnown RBP-3.96□□□□□ -3.04
RNU6-539P-201ENST00000516665 GAP43P17677 238 aa-3.96□□□□□ -3.04
RNU6-539P-201ENST00000516665 GSTM3P21266 225 aa-3.96□□□□□ -3.04
RNU6-539P-201ENST00000516665 DAD1P61803 113 aa-3.96□□□□□ -3.04
RNU6-539P-201ENST00000516665 STX4Q12846 297 aa-3.96□□□□□ -3.04
RNU6-539P-201ENST00000516665 TRIP13Q15645 432 aaPredicted RBP-3.96□□□□□ -3.04
RNU6-539P-201ENST00000516665 ATP6V1FQ16864 119 aa-3.96□□□□□ -3.04
RNU6-539P-201ENST00000516665 RESP18Q5W5W9 173 aa-3.96□□□□□ -3.04
RNU6-539P-201ENST00000516665 SPERTQ8NA61 448 aa-3.96□□□□□ -3.04
RNU6-539P-201ENST00000516665 SYT4Q9H2B2 425 aa-3.96□□□□□ -3.04
RNU6-539P-201ENST00000516665 H3BNG1 76 aa-3.97□□□□□ -3.04
RNU6-539P-201ENST00000516665 K7EN84 100 aa-3.97□□□□□ -3.04
RNU6-539P-201ENST00000516665 HSBP1O75506 76 aa-3.97□□□□□ -3.04
RNU6-539P-201ENST00000516665 SC5DO75845 299 aa-3.97□□□□□ -3.04
RNU6-539P-201ENST00000516665 ARL6IP5O75915 188 aa-3.97□□□□□ -3.04
RNU6-539P-201ENST00000516665 OR7C1O76099 320 aaPredicted RBP-3.97□□□□□ -3.04
RNU6-539P-201ENST00000516665 APOMO95445 188 aa-3.97□□□□□ -3.04
RNU6-539P-201ENST00000516665 GABRR2P28476 465 aa-3.97□□□□□ -3.04
RNU6-539P-201ENST00000516665 RAD51Q06609 339 aa-3.97□□□□□ -3.04
RNU6-539P-201ENST00000516665 IMP4Q96G21 291 aaKnown RBP-3.97□□□□□ -3.04
RNU6-539P-201ENST00000516665 OR52E6Q96RD3 313 aa-3.97□□□□□ -3.04
RNU6-539P-201ENST00000516665 BCL2L10Q9HD36 194 aa-3.97□□□□□ -3.04
RNU6-539P-201ENST00000516665 GPR84Q9NQS5 396 aa-3.97□□□□□ -3.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms