RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 C22orf15Q8WYQ4 148 aa12.25□□□□□ -0.45
THUMPD3-210ENST00000515662 MED13LQ71F56 2210 aa12.25□□□□□ -0.45
THUMPD3-210ENST00000515662 ATP5G3P48201 142 aa12.25□□□□□ -0.45
THUMPD3-210ENST00000515662 CX3CL1P78423 397 aa12.25□□□□□ -0.45
THUMPD3-210ENST00000515662 RPUSD4Q96CM3 377 aaKnown RBP12.25□□□□□ -0.45
THUMPD3-210ENST00000515662 SMIM7Q9BQ49 75 aa12.25□□□□□ -0.45
THUMPD3-210ENST00000515662 FAM103A1Q9BTL3 118 aaKnown RBP12.25□□□□□ -0.45
THUMPD3-210ENST00000515662 SDF2L1Q9HCN8 221 aa12.25□□□□□ -0.45
THUMPD3-210ENST00000515662 TECRQ9NZ01 308 aaKnown RBP12.25□□□□□ -0.45
THUMPD3-210ENST00000515662 IGHV3-21A0A0B4J1V1 117 aa12.24□□□□□ -0.45
THUMPD3-210ENST00000515662 PDE6DO43924 150 aa12.24□□□□□ -0.45
THUMPD3-210ENST00000515662 BRS3P32247 399 aa12.24□□□□□ -0.45
THUMPD3-210ENST00000515662 PNRC1Q12796 327 aaPredicted RBP12.24□□□□□ -0.45
THUMPD3-210ENST00000515662 TRGV9Q99603 122 aa12.24□□□□□ -0.45
THUMPD3-210ENST00000515662 PARLQ9H300 379 aa12.24□□□□□ -0.45
THUMPD3-210ENST00000515662 DNAJC4Q9NNZ3 241 aa12.24□□□□□ -0.45
THUMPD3-210ENST00000515662 TNFRSF19Q9NS68 423 aa12.24□□□□□ -0.45
THUMPD3-210ENST00000515662 WNK2Q9Y3S1 2297 aa12.24□□□□□ -0.45
THUMPD3-210ENST00000515662 ABCA2Q9BZC7 2435 aa12.24□□□□□ -0.45
THUMPD3-210ENST00000515662 A0A087WWC5 75 aa12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 I3L2K1 104 aa12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 HIST1H2BKO60814 126 aa12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 HIST1H2BJP06899 126 aa12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 HIST1H2BOP23527 126 aa12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 NPPCP23582 126 aa12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 HIST1H2BBP33778 126 aa12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 HIST1H2BDP58876 126 aa12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 DSCR9P59020 149 aa12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 HIST1H2BCP62807 126 aa12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 HIST2H2BEQ16778 126 aa12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 ARPC1AQ92747 370 aa12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 HIST1H2BHQ93079 126 aa12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 HIST1H2BNQ99877 126 aa12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 HIST1H2BMQ99879 126 aa12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 TXNDC17Q9BRA2 123 aa12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 MRPL32Q9BYC8 188 aaKnown RBP12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 YTHDF2Q9Y5A9 579 aaKnown RBP12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 HOXA5P20719 270 aa12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 PYY3Q5JQD4 70 aa12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 ZNF503Q96F45 646 aa12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 RNF2Q99496 336 aa12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 NAT8Q9UHE5 227 aa12.23□□□□□ -0.45
THUMPD3-210ENST00000515662 B4DEV8 164 aa12.22□□□□□ -0.45
THUMPD3-210ENST00000515662 COX7A2P2O60397 106 aa12.22□□□□□ -0.45
THUMPD3-210ENST00000515662 TAS2R45P59539 299 aa12.22□□□□□ -0.45
THUMPD3-210ENST00000515662 NDPQ00604 133 aa12.22□□□□□ -0.45
THUMPD3-210ENST00000515662 FAM209BQ5JX69 171 aa12.22□□□□□ -0.45
THUMPD3-210ENST00000515662 PATE2Q6UY27 113 aa12.22□□□□□ -0.45
THUMPD3-210ENST00000515662 OR51G1Q8NGK1 321 aa12.22□□□□□ -0.45
THUMPD3-210ENST00000515662 OR1L4Q8NGR5 311 aa12.22□□□□□ -0.45
THUMPD3-210ENST00000515662 OR4X1Q8NH49 305 aa12.22□□□□□ -0.45
THUMPD3-210ENST00000515662 TCEAL7Q9BRU2 100 aa12.22□□□□□ -0.45
THUMPD3-210ENST00000515662 OR51M1Q9H341 326 aa12.22□□□□□ -0.45
THUMPD3-210ENST00000515662 C1RLQ9NZP8 487 aa12.22□□□□□ -0.45
THUMPD3-210ENST00000515662 CRYBG3Q68DQ2 2970 aa12.22□□□□□ -0.45
THUMPD3-210ENST00000515662 F6UZH7 168 aa12.22□□□□□ -0.45
THUMPD3-210ENST00000515662 C8orf88P0DMB2 117 aa12.22□□□□□ -0.45
THUMPD3-210ENST00000515662 TMEM241Q24JQ0 296 aa12.22□□□□□ -0.45
THUMPD3-210ENST00000515662 ASPHD1Q5U4P2 390 aa12.22□□□□□ -0.45
THUMPD3-210ENST00000515662 MORN5Q5VZ52 161 aa12.22□□□□□ -0.45
THUMPD3-210ENST00000515662 PQLC2Q6ZP29 291 aa12.22□□□□□ -0.45
THUMPD3-210ENST00000515662 Q8N9W7 124 aa12.22□□□□□ -0.45
THUMPD3-210ENST00000515662 OR1L6Q8NGR2 347 aa12.22□□□□□ -0.45
THUMPD3-210ENST00000515662 PFDN5Q99471 154 aa12.22□□□□□ -0.45
THUMPD3-210ENST00000515662 VPS13CQ709C8 3753 aa12.21□□□□□ -0.45
THUMPD3-210ENST00000515662 IGHV1-69DA0A0B4J2H0 117 aa12.21□□□□□ -0.45
THUMPD3-210ENST00000515662 IGHV1-69P01742 117 aa12.21□□□□□ -0.45
THUMPD3-210ENST00000515662 C10orf113Q5VZT2 155 aa12.21□□□□□ -0.45
THUMPD3-210ENST00000515662 FAM167A-AS1Q96KT0 104 aa12.21□□□□□ -0.45
THUMPD3-210ENST00000515662 IGHV3OR16-10A0A075B7F0 116 aa12.21□□□□□ -0.46
THUMPD3-210ENST00000515662 NPIPB5A8MRT5 1133 aa12.21□□□□□ -0.46
THUMPD3-210ENST00000515662 K7EIM0 57 aa12.21□□□□□ -0.46
THUMPD3-210ENST00000515662 MSMBP08118 114 aa12.21□□□□□ -0.46
THUMPD3-210ENST00000515662 CDX1P47902 265 aaPredicted RBP12.21□□□□□ -0.46
THUMPD3-210ENST00000515662 FRZBQ92765 325 aa12.21□□□□□ -0.46
THUMPD3-210ENST00000515662 GPR61Q9BZJ8 451 aa12.21□□□□□ -0.46
THUMPD3-210ENST00000515662 GSX1Q9H4S2 264 aaPredicted RBP12.21□□□□□ -0.46
THUMPD3-210ENST00000515662 TMEM167BQ9NRX6 74 aa12.21□□□□□ -0.46
THUMPD3-210ENST00000515662 TRAV5A0A0B4J249 113 aa12.2□□□□□ -0.46
THUMPD3-210ENST00000515662 OR7C2O60412 319 aa12.2□□□□□ -0.46
THUMPD3-210ENST00000515662 BPIFB3P59826 476 aa12.2□□□□□ -0.46
THUMPD3-210ENST00000515662 SLC25A2Q9BXI2 301 aa12.2□□□□□ -0.46
THUMPD3-210ENST00000515662 LRRK2Q5S007 2527 aa12.2□□□□□ -0.46
THUMPD3-210ENST00000515662 IGHV7-81A0A0B4J1V7 117 aa12.2□□□□□ -0.46
THUMPD3-210ENST00000515662 NDUFB4O95168 129 aa12.2□□□□□ -0.46
THUMPD3-210ENST00000515662 CLEC12BQ2HXU8 276 aa12.2□□□□□ -0.46
THUMPD3-210ENST00000515662 KLF17Q5JT82 389 aaPredicted RBP12.2□□□□□ -0.46
THUMPD3-210ENST00000515662 TTC9CQ8N5M4 171 aa12.2□□□□□ -0.46
THUMPD3-210ENST00000515662 FAM210BQ96KR6 192 aa12.2□□□□□ -0.46
THUMPD3-210ENST00000515662 ARL2-SNX15V9GYD0 113 aa12.2□□□□□ -0.46
THUMPD3-210ENST00000515662 ELOA3CA0A087WX78 387 aaPredicted RBP12.19□□□□□ -0.46
THUMPD3-210ENST00000515662 HLA-DRB1P01911 266 aa12.19□□□□□ -0.46
THUMPD3-210ENST00000515662 TRGC1P0CF51 173 aa12.19□□□□□ -0.46
THUMPD3-210ENST00000515662 IGLC1P0CG04 106 aa12.19□□□□□ -0.46
THUMPD3-210ENST00000515662 EGR2P11161 476 aaPredicted RBP12.19□□□□□ -0.46
THUMPD3-210ENST00000515662 NECAP1Q8NC96 275 aa12.19□□□□□ -0.46
THUMPD3-210ENST00000515662 OR10D4PQ8NGN7 298 aa12.19□□□□□ -0.46
THUMPD3-210ENST00000515662 UHRF2Q96PU4 802 aa12.19□□□□□ -0.46
THUMPD3-210ENST00000515662 ZNF355PQ9NSJ1 428 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms