RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 RNF141Q8WVD5 230 aa7.3□□□□□ -1.24
CLDND1-231ENST00000515620 SEC22AQ96IW7 307 aa7.3□□□□□ -1.24
CLDND1-231ENST00000515620 C17orf77Q96MU5 243 aa7.3□□□□□ -1.24
CLDND1-231ENST00000515620 MAGT1Q9H0U3 335 aa7.3□□□□□ -1.24
CLDND1-231ENST00000515620 SAV1Q9H4B6 383 aaPredicted RBP7.3□□□□□ -1.24
CLDND1-231ENST00000515620 FNDC4Q9H6D8 234 aaPredicted RBP7.3□□□□□ -1.24
CLDND1-231ENST00000515620 SEPSECSQ9HD40 501 aaKnown RBP7.3□□□□□ -1.24
CLDND1-231ENST00000515620 EHFQ9NZC4 300 aa7.3□□□□□ -1.24
CLDND1-231ENST00000515620 TRAV18A0A075B6X5 111 aa7.29□□□□□ -1.24
CLDND1-231ENST00000515620 MEIS3P1A6NDR6 274 aa7.29□□□□□ -1.24
CLDND1-231ENST00000515620 CORTO00230 105 aa7.29□□□□□ -1.24
CLDND1-231ENST00000515620 PSG9Q00887 426 aa7.29□□□□□ -1.24
CLDND1-231ENST00000515620 USF2Q15853 346 aaPredicted RBP7.29□□□□□ -1.24
CLDND1-231ENST00000515620 MLANAQ16655 118 aa7.29□□□□□ -1.24
CLDND1-231ENST00000515620 IZUMO4Q1ZYL8 232 aa7.29□□□□□ -1.24
CLDND1-231ENST00000515620 FOXI2Q6ZQN5 318 aa7.29□□□□□ -1.24
CLDND1-231ENST00000515620 Q6ZSN1 163 aa7.29□□□□□ -1.24
CLDND1-231ENST00000515620 SLC35G3Q8N808 338 aa7.29□□□□□ -1.24
CLDND1-231ENST00000515620 OR4X1Q8NH49 305 aa7.29□□□□□ -1.24
CLDND1-231ENST00000515620 MRGPRFQ96AM1 343 aa7.29□□□□□ -1.24
CLDND1-231ENST00000515620 LINC00052Q96N35 136 aa7.29□□□□□ -1.24
CLDND1-231ENST00000515620 ZNF2Q9BSG1 426 aaPredicted RBP7.29□□□□□ -1.24
CLDND1-231ENST00000515620 TMEM208Q9BTX3 173 aa7.29□□□□□ -1.24
CLDND1-231ENST00000515620 FXYD6Q9H0Q3 95 aa7.29□□□□□ -1.24
CLDND1-231ENST00000515620 RHBDL2Q9NX52 303 aa7.29□□□□□ -1.24
CLDND1-231ENST00000515620 LYRM9A8MSI8 78 aa7.28□□□□□ -1.24
CLDND1-231ENST00000515620 NOTOA8MTQ0 251 aa7.28□□□□□ -1.24
CLDND1-231ENST00000515620 FAM229AH3BQW9 127 aa7.28□□□□□ -1.24
CLDND1-231ENST00000515620 M0QYG6 137 aa7.28□□□□□ -1.24
CLDND1-231ENST00000515620 RGS10O43665 173 aa7.28□□□□□ -1.24
CLDND1-231ENST00000515620 IGKV1-39P01597 117 aa7.28□□□□□ -1.24
CLDND1-231ENST00000515620 IGKV1D-39P04432 117 aa7.28□□□□□ -1.24
CLDND1-231ENST00000515620 PRM2P04554 102 aa7.28□□□□□ -1.24
CLDND1-231ENST00000515620 ATP5G1P05496 136 aa7.28□□□□□ -1.24
CLDND1-231ENST00000515620 RNASE2P10153 161 aaKnown RBP7.28□□□□□ -1.24
CLDND1-231ENST00000515620 ATP5G3P48201 142 aa7.28□□□□□ -1.24
CLDND1-231ENST00000515620 RORCP51449 518 aa7.28□□□□□ -1.24
CLDND1-231ENST00000515620 LINC00315P59091 139 aa7.28□□□□□ -1.24
CLDND1-231ENST00000515620 KRTAP10-1P60331 282 aa7.28□□□□□ -1.24
CLDND1-231ENST00000515620 ZNF79Q15937 498 aa7.28□□□□□ -1.24
CLDND1-231ENST00000515620 PHLDA2Q53GA4 152 aa7.28□□□□□ -1.24
CLDND1-231ENST00000515620 C22orf42Q6IC83 251 aa7.28□□□□□ -1.24
CLDND1-231ENST00000515620 CDPF1Q6NVV7 123 aa7.28□□□□□ -1.24
CLDND1-231ENST00000515620 COQ8AQ8NI60 647 aa7.28□□□□□ -1.24
CLDND1-231ENST00000515620 CLUHP3Q96NS8 147 aa7.28□□□□□ -1.24
CLDND1-231ENST00000515620 UHRF2Q96PU4 802 aa7.28□□□□□ -1.24
CLDND1-231ENST00000515620 ZNF586Q9NXT0 402 aa7.28□□□□□ -1.24
CLDND1-231ENST00000515620 A0A1W2PPQ1 181 aa7.27□□□□□ -1.25
CLDND1-231ENST00000515620 ZNF705GA8MUZ8 300 aaPredicted RBP7.27□□□□□ -1.25
CLDND1-231ENST00000515620 F6UB75 175 aa7.27□□□□□ -1.25
CLDND1-231ENST00000515620 GPR31O00270 319 aa7.27□□□□□ -1.25
CLDND1-231ENST00000515620 EREGO14944 169 aa7.27□□□□□ -1.25
CLDND1-231ENST00000515620 IL4P05112 153 aa7.27□□□□□ -1.25
CLDND1-231ENST00000515620 RFX2P48378 723 aa7.27□□□□□ -1.25
CLDND1-231ENST00000515620 SUB1P53999 127 aaKnown RBP eCLIP7.27□□□□□ -1.25
CLDND1-231ENST00000515620 HAMPP81172 84 aa7.27□□□□□ -1.25
CLDND1-231ENST00000515620 DHODHQ02127 395 aa7.27□□□□□ -1.25
CLDND1-231ENST00000515620 ICAM4Q14773 271 aa7.27□□□□□ -1.25
CLDND1-231ENST00000515620 FAM78BQ5VT40 261 aa7.27□□□□□ -1.25
CLDND1-231ENST00000515620 OR4C16Q8NGL9 310 aa7.27□□□□□ -1.25
CLDND1-231ENST00000515620 OR1S2Q8NGQ3 325 aa7.27□□□□□ -1.25
CLDND1-231ENST00000515620 Q8WTZ3 238 aa7.27□□□□□ -1.25
CLDND1-231ENST00000515620 WDR12Q9GZL7 423 aaKnown RBP7.27□□□□□ -1.25
CLDND1-231ENST00000515620 SCPEP1Q9HB40 452 aa7.27□□□□□ -1.25
CLDND1-231ENST00000515620 IFT46Q9NQC8 304 aa7.27□□□□□ -1.25
CLDND1-231ENST00000515620 NDUFB11Q9NX14 153 aa7.27□□□□□ -1.25
CLDND1-231ENST00000515620 TPRKBQ9Y3C4 175 aa7.27□□□□□ -1.25
CLDND1-231ENST00000515620 TRAV30A0A087WSZ9 112 aa7.26□□□□□ -1.25
CLDND1-231ENST00000515620 TRDV1A0A1B0GX56 115 aa7.26□□□□□ -1.25
CLDND1-231ENST00000515620 BUB3O43684 328 aa7.26□□□□□ -1.25
CLDND1-231ENST00000515620 GSTZ1O43708 216 aaPredicted RBP7.26□□□□□ -1.25
CLDND1-231ENST00000515620 IGLC1P0CG04 106 aa7.26□□□□□ -1.25
CLDND1-231ENST00000515620 ID1P41134 155 aa7.26□□□□□ -1.25
CLDND1-231ENST00000515620 RND2P52198 227 aa7.26□□□□□ -1.25
CLDND1-231ENST00000515620 ERVFC1-1P60608 527 aa7.26□□□□□ -1.25
CLDND1-231ENST00000515620 FCN2Q15485 313 aa7.26□□□□□ -1.25
CLDND1-231ENST00000515620 TMEM69Q5SWH9 247 aa7.26□□□□□ -1.25
CLDND1-231ENST00000515620 DHRS11Q6UWP2 260 aa7.26□□□□□ -1.25
CLDND1-231ENST00000515620 Q6ZRN7 208 aaPredicted RBP7.26□□□□□ -1.25
CLDND1-231ENST00000515620 TBC1D26Q86UD7 250 aa7.26□□□□□ -1.25
CLDND1-231ENST00000515620 OR6F1Q8NGZ6 308 aa7.26□□□□□ -1.25
CLDND1-231ENST00000515620 SLC25A38Q96DW6 304 aa7.26□□□□□ -1.25
CLDND1-231ENST00000515620 DUSP21Q9H596 190 aa7.26□□□□□ -1.25
CLDND1-231ENST00000515620 AUNIPQ9H7T9 357 aa7.26□□□□□ -1.25
CLDND1-231ENST00000515620 RRP15Q9Y3B9 282 aaKnown RBP7.26□□□□□ -1.25
CLDND1-231ENST00000515620 INS-IGF2F8WCM5 200 aa7.25□□□□□ -1.25
CLDND1-231ENST00000515620 IFNA5P01569 189 aa7.25□□□□□ -1.25
CLDND1-231ENST00000515620 PMP2P02689 132 aa7.25□□□□□ -1.25
CLDND1-231ENST00000515620 VAMP1P23763 118 aa7.25□□□□□ -1.25
CLDND1-231ENST00000515620 S100GP29377 79 aa7.25□□□□□ -1.25
CLDND1-231ENST00000515620 OR10J1P30954 320 aa7.25□□□□□ -1.25
CLDND1-231ENST00000515620 CBX5P45973 191 aa7.25□□□□□ -1.25
CLDND1-231ENST00000515620 RPL5P46777 297 aaKnown RBP7.25□□□□□ -1.25
CLDND1-231ENST00000515620 PSMB3P49720 205 aa7.25□□□□□ -1.25
CLDND1-231ENST00000515620 EBLN2Q6P2I7 272 aa7.25□□□□□ -1.25
CLDND1-231ENST00000515620 SFXN4Q6P4A7 337 aa7.25□□□□□ -1.25
CLDND1-231ENST00000515620 IGF2BP2-AS1Q96M15 143 aa7.25□□□□□ -1.25
CLDND1-231ENST00000515620 UPK3BQ9BT76 320 aa7.25□□□□□ -1.25
CLDND1-231ENST00000515620 FAM212BQ9NTI7 297 aaPredicted RBP7.25□□□□□ -1.25
CLDND1-231ENST00000515620 VPS13BQ7Z7G8 4022 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms