RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 CCL7P80098 99 aa1.18□□□□□ -2.22
HMGCS1-207ENST00000514610 H3F3AP84243 136 aa1.18□□□□□ -2.22
HMGCS1-207ENST00000514610 IAH1Q2TAA2 248 aaPredicted RBP1.18□□□□□ -2.22
HMGCS1-207ENST00000514610 LINC01554Q52M75 96 aa1.18□□□□□ -2.22
HMGCS1-207ENST00000514610 SPANXN5Q5MJ07 72 aa1.18□□□□□ -2.22
HMGCS1-207ENST00000514610 TEX36Q5VZQ5 186 aa1.18□□□□□ -2.22
HMGCS1-207ENST00000514610 TRAPPC6BQ86SZ2 158 aa1.18□□□□□ -2.22
HMGCS1-207ENST00000514610 OR6V1Q8N148 313 aa1.18□□□□□ -2.22
HMGCS1-207ENST00000514610 OR52L1Q8NGH7 329 aa1.18□□□□□ -2.22
HMGCS1-207ENST00000514610 OR4C6Q8NH72 309 aa1.18□□□□□ -2.22
HMGCS1-207ENST00000514610 GPR146Q96CH1 333 aa1.18□□□□□ -2.22
HMGCS1-207ENST00000514610 PRAP1Q96NZ9 151 aa1.18□□□□□ -2.22
HMGCS1-207ENST00000514610 TLNRD1Q9H1K6 362 aa1.18□□□□□ -2.22
HMGCS1-207ENST00000514610 C22orf24Q9Y442 160 aa1.18□□□□□ -2.22
HMGCS1-207ENST00000514610 UBR2Q8IWV8 1755 aa1.18□□□□□ -2.22
HMGCS1-207ENST00000514610 RTL1A6NKG5 1358 aa1.18□□□□□ -2.22
HMGCS1-207ENST00000514610 HEATR1Q9H583 2144 aaKnown RBP1.18□□□□□ -2.22
HMGCS1-207ENST00000514610 MCM3APO60318 1980 aa1.17□□□□□ -2.22
HMGCS1-207ENST00000514610 TRAV3A0A0B4J244 114 aa1.17□□□□□ -2.22
HMGCS1-207ENST00000514610 C2orf70A6NJV1 201 aa1.17□□□□□ -2.22
HMGCS1-207ENST00000514610 TCL1BO95988 128 aa1.17□□□□□ -2.22
HMGCS1-207ENST00000514610 HAND1O96004 215 aa1.17□□□□□ -2.22
HMGCS1-207ENST00000514610 SERPINE1P05121 402 aa1.17□□□□□ -2.22
HMGCS1-207ENST00000514610 MGST1P10620 155 aaKnown RBP1.17□□□□□ -2.22
HMGCS1-207ENST00000514610 CASP1P29466 404 aa1.17□□□□□ -2.22
HMGCS1-207ENST00000514610 BRS3P32247 399 aa1.17□□□□□ -2.22
HMGCS1-207ENST00000514610 OOSP2Q86WS3 158 aa1.17□□□□□ -2.22
HMGCS1-207ENST00000514610 C12orf45Q8N5I9 185 aaPredicted RBP1.17□□□□□ -2.22
HMGCS1-207ENST00000514610 LINC00311Q8N616 119 aa1.17□□□□□ -2.22
HMGCS1-207ENST00000514610 SLC25A40Q8TBP6 338 aa1.17□□□□□ -2.22
HMGCS1-207ENST00000514610 ITFG2Q969R8 447 aa1.17□□□□□ -2.22
HMGCS1-207ENST00000514610 SIGMAR1Q99720 223 aa1.17□□□□□ -2.22
HMGCS1-207ENST00000514610 FBXO5Q9UKT4 447 aa1.17□□□□□ -2.22
HMGCS1-207ENST00000514610 DOCK4Q8N1I0 1966 aa1.16□□□□□ -2.22
HMGCS1-207ENST00000514610 CAMSAP1Q5T5Y3 1602 aa1.16□□□□□ -2.22
HMGCS1-207ENST00000514610 ARHGEF28Q8N1W1 1705 aaKnown RBP1.16□□□□□ -2.22
HMGCS1-207ENST00000514610 IGKV2D-26A0A0A0MRZ7 120 aa1.16□□□□□ -2.22
HMGCS1-207ENST00000514610 OR2T1O43869 369 aa1.16□□□□□ -2.22
HMGCS1-207ENST00000514610 C8GP07360 202 aa1.16□□□□□ -2.22
HMGCS1-207ENST00000514610 CTXN2P0C2S0 81 aa1.16□□□□□ -2.22
HMGCS1-207ENST00000514610 PPIBP23284 216 aaKnown RBP1.16□□□□□ -2.22
HMGCS1-207ENST00000514610 SERPINB9P50453 376 aa1.16□□□□□ -2.22
HMGCS1-207ENST00000514610 ERVS71-1P61550 626 aa1.16□□□□□ -2.22
HMGCS1-207ENST00000514610 PRB3Q04118 309 aaPredicted RBP1.16□□□□□ -2.22
HMGCS1-207ENST00000514610 FADDQ13158 208 aa1.16□□□□□ -2.22
HMGCS1-207ENST00000514610 SPA17Q15506 151 aa1.16□□□□□ -2.22
HMGCS1-207ENST00000514610 WFDC5Q8TCV5 224 aa1.16□□□□□ -2.22
HMGCS1-207ENST00000514610 DGCR14Q96DF8 476 aaKnown RBP1.16□□□□□ -2.22
HMGCS1-207ENST00000514610 TAS2R4Q9NYW5 299 aa1.16□□□□□ -2.22
HMGCS1-207ENST00000514610 SNURFQ9Y675 71 aa1.16□□□□□ -2.22
HMGCS1-207ENST00000514610 PLXNA4Q9HCM2 1894 aa1.16□□□□□ -2.22
HMGCS1-207ENST00000514610 IGKV1-9A0A0C4DH69 117 aa1.15□□□□□ -2.23
HMGCS1-207ENST00000514610 CLDN25C9JDP6 229 aa1.15□□□□□ -2.23
HMGCS1-207ENST00000514610 GEMIN2O14893 280 aaKnown RBP1.15□□□□□ -2.23
HMGCS1-207ENST00000514610 OR1I1O60431 355 aa1.15□□□□□ -2.23
HMGCS1-207ENST00000514610 IFNA6P05013 189 aa1.15□□□□□ -2.23
HMGCS1-207ENST00000514610 OR4E1P0C645 316 aa1.15□□□□□ -2.23
HMGCS1-207ENST00000514610 YPEL3P61236 119 aaPredicted RBP1.15□□□□□ -2.23
HMGCS1-207ENST00000514610 RHOBP62745 196 aa1.15□□□□□ -2.23
HMGCS1-207ENST00000514610 REEP5Q00765 189 aa1.15□□□□□ -2.23
HMGCS1-207ENST00000514610 LIN52Q52LA3 116 aa1.15□□□□□ -2.23
HMGCS1-207ENST00000514610 S100A7AQ86SG5 101 aa1.15□□□□□ -2.23
HMGCS1-207ENST00000514610 PHF13Q86YI8 300 aaPredicted RBP1.15□□□□□ -2.23
HMGCS1-207ENST00000514610 KIFC1Q9BW19 673 aa1.15□□□□□ -2.23
HMGCS1-207ENST00000514610 CASP8AP2Q9UKL3 1982 aa1.15□□□□□ -2.23
HMGCS1-207ENST00000514610 A0A087X0T9 212 aa1.14□□□□□ -2.23
HMGCS1-207ENST00000514610 CYB5BO43169 146 aa1.14□□□□□ -2.23
HMGCS1-207ENST00000514610 OR2B3O76000 313 aa1.14□□□□□ -2.23
HMGCS1-207ENST00000514610 MIFP14174 115 aa1.14□□□□□ -2.23
HMGCS1-207ENST00000514610 SRIP30626 198 aa1.14□□□□□ -2.23
HMGCS1-207ENST00000514610 LCA10Q71F78 164 aa1.14□□□□□ -2.23
HMGCS1-207ENST00000514610 FAM19A2Q8N3H0 131 aa1.14□□□□□ -2.23
HMGCS1-207ENST00000514610 OR13D1Q8NGV5 346 aa1.14□□□□□ -2.23
HMGCS1-207ENST00000514610 BTF3L4Q96K17 158 aa1.14□□□□□ -2.23
HMGCS1-207ENST00000514610 HIST1H2BLQ99880 126 aa1.14□□□□□ -2.23
HMGCS1-207ENST00000514610 ENY2Q9NPA8 101 aa1.14□□□□□ -2.23
HMGCS1-207ENST00000514610 FAM32AQ9Y421 112 aaKnown RBP1.14□□□□□ -2.23
HMGCS1-207ENST00000514610 RIMBP3CA6NJZ7 1639 aa1.14□□□□□ -2.23
HMGCS1-207ENST00000514610 RIMBP3BA6NNM3 1639 aa1.14□□□□□ -2.23
HMGCS1-207ENST00000514610 RIMBP3Q9UFD9 1639 aa1.14□□□□□ -2.23
HMGCS1-207ENST00000514610 MYH2Q9UKX2 1941 aa1.13□□□□□ -2.23
HMGCS1-207ENST00000514610 SULT1B1O43704 296 aa1.13□□□□□ -2.23
HMGCS1-207ENST00000514610 UBL3O95164 117 aa1.13□□□□□ -2.23
HMGCS1-207ENST00000514610 PDE6HQ13956 83 aa1.13□□□□□ -2.23
HMGCS1-207ENST00000514610 BRMS1LQ5PSV4 323 aa1.13□□□□□ -2.23
HMGCS1-207ENST00000514610 Q6Q795 121 aa1.13□□□□□ -2.23
HMGCS1-207ENST00000514610 OR8D4Q8NGM9 314 aa1.13□□□□□ -2.23
HMGCS1-207ENST00000514610 ADAT3Q96EY9 351 aaPredicted RBP1.13□□□□□ -2.23
HMGCS1-207ENST00000514610 C2orf50Q96LR7 162 aa1.13□□□□□ -2.23
HMGCS1-207ENST00000514610 MIXL1Q9H2W2 232 aa1.13□□□□□ -2.23
HMGCS1-207ENST00000514610 TVP23BQ9NYZ1 205 aa1.13□□□□□ -2.23
HMGCS1-207ENST00000514610 SLC35A3Q9Y2D2 325 aa1.13□□□□□ -2.23
HMGCS1-207ENST00000514610 MYO5AQ9Y4I1 1855 aaKnown RBP1.12□□□□□ -2.23
HMGCS1-207ENST00000514610 FAM159BA6NKW6 160 aa1.12□□□□□ -2.23
HMGCS1-207ENST00000514610 C19orf84I3L1E1 186 aa1.12□□□□□ -2.23
HMGCS1-207ENST00000514610 OR7C1O76099 320 aaPredicted RBP1.12□□□□□ -2.23
HMGCS1-207ENST00000514610 SERPINA1P01009 418 aa1.12□□□□□ -2.23
HMGCS1-207ENST00000514610 BAALC-AS2P0C853 105 aa1.12□□□□□ -2.23
HMGCS1-207ENST00000514610 ERP29P30040 261 aaKnown RBP1.12□□□□□ -2.23
HMGCS1-207ENST00000514610 ZNF93P35789 620 aaPredicted RBP1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms