RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 TUBA4BQ9H853 241 aa10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 SMAD7O15105 426 aaKnown RBP10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 TRGC1P0CF51 173 aa10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 STAG3L2P0CL84 134 aa10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 STAG3L3P0CL85 134 aa10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 TMEM183BQ1AE95 376 aa10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 TEX36Q5VZQ5 186 aa10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 RNF125Q96EQ8 232 aa10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 SIGLEC9Q9Y336 463 aa10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 C15orf65H3BRN8 121 aa10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 TAS2R60P59551 318 aa10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 C17orf58Q2M2W7 97 aa10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 PVRIGQ6DKI7 326 aa10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 FAM71F2Q6NXP2 309 aa10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 RBPMS2Q6ZRY4 209 aaKnown RBP10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 PGLYRP4Q96LB8 373 aa10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 MED12LQ86YW9 2145 aa10.7□□□□□ -0.7
PCDHA4-202ENST00000512229 M0QZK8 103 aa10.69□□□□□ -0.7
PCDHA4-202ENST00000512229 SLC17A3O00476 420 aa10.69□□□□□ -0.7
PCDHA4-202ENST00000512229 IGKV1-39P01597 117 aa10.69□□□□□ -0.7
PCDHA4-202ENST00000512229 IGKV1D-39P04432 117 aa10.69□□□□□ -0.7
PCDHA4-202ENST00000512229 ELOBQ15370 118 aa10.69□□□□□ -0.7
PCDHA4-202ENST00000512229 ANKRD11Q6UB99 2663 aaPredicted RBP10.69□□□□□ -0.7
PCDHA4-202ENST00000512229 RHOGP84095 191 aa10.69□□□□□ -0.7
PCDHA4-202ENST00000512229 KIAA1644Q3SXP7 199 aa10.69□□□□□ -0.7
PCDHA4-202ENST00000512229 SEM1Q6ZVN7 128 aa10.69□□□□□ -0.7
PCDHA4-202ENST00000512229 C11orf42Q8N5U0 333 aa10.69□□□□□ -0.7
PCDHA4-202ENST00000512229 GPR61Q9BZJ8 451 aa10.69□□□□□ -0.7
PCDHA4-202ENST00000512229 PYYP10082 97 aa10.69□□□□□ -0.7
PCDHA4-202ENST00000512229 LOXP28300 417 aaPredicted RBP10.69□□□□□ -0.7
PCDHA4-202ENST00000512229 FCER1GP30273 86 aa10.69□□□□□ -0.7
PCDHA4-202ENST00000512229 DSCR9P59020 149 aa10.69□□□□□ -0.7
PCDHA4-202ENST00000512229 C5orf64Q2M2E5 130 aa10.69□□□□□ -0.7
PCDHA4-202ENST00000512229 LEMD1Q68G75 181 aa10.69□□□□□ -0.7
PCDHA4-202ENST00000512229 CCDC168Q8NDH2 2452 aa10.69□□□□□ -0.7
PCDHA4-202ENST00000512229 EML6Q6ZMW3 1958 aa10.68□□□□□ -0.7
PCDHA4-202ENST00000512229 PRSS1P07477 247 aa10.68□□□□□ -0.7
PCDHA4-202ENST00000512229 TWIST1Q15672 202 aa10.68□□□□□ -0.7
PCDHA4-202ENST00000512229 GPR82Q96P67 336 aa10.68□□□□□ -0.7
PCDHA4-202ENST00000512229 MGST2Q99735 147 aa10.68□□□□□ -0.7
PCDHA4-202ENST00000512229 TRIOO75962 3097 aa10.68□□□□□ -0.7
PCDHA4-202ENST00000512229 IGHV3-66A0A0C4DH42 116 aa10.68□□□□□ -0.7
PCDHA4-202ENST00000512229 IGHV3-11P01762 117 aa10.68□□□□□ -0.7
PCDHA4-202ENST00000512229 HLA-DRB1P01911 266 aa10.68□□□□□ -0.7
PCDHA4-202ENST00000512229 CD81P60033 236 aa10.68□□□□□ -0.7
PCDHA4-202ENST00000512229 PAX9P55771 341 aa10.68□□□□□ -0.7
PCDHA4-202ENST00000512229 SMUG1Q53HV7 270 aa10.68□□□□□ -0.7
PCDHA4-202ENST00000512229 OR4B1Q8NGF8 309 aa10.68□□□□□ -0.7
PCDHA4-202ENST00000512229 TMEM191AQ9H0A3 160 aa10.68□□□□□ -0.7
PCDHA4-202ENST00000512229 Q9H3A6 140 aa10.68□□□□□ -0.7
PCDHA4-202ENST00000512229 SEPSECSQ9HD40 501 aaKnown RBP10.68□□□□□ -0.7
PCDHA4-202ENST00000512229 ZNF600Q6ZNG1 722 aa10.67□□□□□ -0.7
PCDHA4-202ENST00000512229 SPTBN4Q9H254 2564 aa10.67□□□□□ -0.7
PCDHA4-202ENST00000512229 B4DSR2 109 aa10.67□□□□□ -0.7
PCDHA4-202ENST00000512229 MMP23AO75900 390 aa10.67□□□□□ -0.7
PCDHA4-202ENST00000512229 GCGP01275 180 aa10.67□□□□□ -0.7
PCDHA4-202ENST00000512229 CBLN1P23435 193 aa10.67□□□□□ -0.7
PCDHA4-202ENST00000512229 ZNF134P52741 427 aa10.67□□□□□ -0.7
PCDHA4-202ENST00000512229 RPS20P60866 119 aaKnown RBP10.67□□□□□ -0.7
PCDHA4-202ENST00000512229 CX3CL1P78423 397 aa10.67□□□□□ -0.7
PCDHA4-202ENST00000512229 IL36BQ9NZH7 164 aa10.67□□□□□ -0.7
PCDHA4-202ENST00000512229 HNRNPA3P51991 378 aaKnown RBP10.67□□□□□ -0.7
PCDHA4-202ENST00000512229 HAX1O00165 279 aa10.66□□□□□ -0.7
PCDHA4-202ENST00000512229 IL15RAQ13261 267 aa10.66□□□□□ -0.7
PCDHA4-202ENST00000512229 KLF17Q5JT82 389 aaPredicted RBP10.66□□□□□ -0.7
PCDHA4-202ENST00000512229 RNASE2P10153 161 aaKnown RBP10.66□□□□□ -0.7
PCDHA4-202ENST00000512229 MLANAQ16655 118 aa10.66□□□□□ -0.7
PCDHA4-202ENST00000512229 CYYR1Q96J86 154 aa10.66□□□□□ -0.7
PCDHA4-202ENST00000512229 LINC00527Q9UJ94 153 aa10.66□□□□□ -0.7
PCDHA4-202ENST00000512229 A0A1B0GW64 132 aa10.66□□□□□ -0.7
PCDHA4-202ENST00000512229 SRIP30626 198 aa10.66□□□□□ -0.7
PCDHA4-202ENST00000512229 CDX1P47902 265 aaPredicted RBP10.66□□□□□ -0.7
PCDHA4-202ENST00000512229 BEND2Q8NDZ0 799 aa10.66□□□□□ -0.7
PCDHA4-202ENST00000512229 OR5AN1Q8NGI8 311 aa10.66□□□□□ -0.7
PCDHA4-202ENST00000512229 F11RQ9Y624 299 aaKnown RBP10.66□□□□□ -0.7
PCDHA4-202ENST00000512229 PGPEP1LA6NFU8 196 aa10.66□□□□□ -0.7
PCDHA4-202ENST00000512229 MGPP08493 103 aa10.66□□□□□ -0.7
PCDHA4-202ENST00000512229 PSG1P11464 419 aa10.66□□□□□ -0.7
PCDHA4-202ENST00000512229 GRNP28799 593 aaKnown RBP10.66□□□□□ -0.7
PCDHA4-202ENST00000512229 CKS2P33552 79 aa10.66□□□□□ -0.7
PCDHA4-202ENST00000512229 C8orf46Q8TAG6 207 aa10.66□□□□□ -0.7
PCDHA4-202ENST00000512229 HSPB9Q9BQS6 159 aa10.66□□□□□ -0.7
PCDHA4-202ENST00000512229 MAP1LC3CQ9BXW4 147 aa10.66□□□□□ -0.7
PCDHA4-202ENST00000512229 GOLT1BQ9Y3E0 138 aa10.66□□□□□ -0.7
PCDHA4-202ENST00000512229 TRBV9A0A0B4J1U6 114 aa10.65□□□□□ -0.7
PCDHA4-202ENST00000512229 TRAV5A0A0B4J249 113 aa10.65□□□□□ -0.7
PCDHA4-202ENST00000512229 A0A1B0GWJ7 208 aa10.65□□□□□ -0.7
PCDHA4-202ENST00000512229 OCC1Q8TAD7 63 aa10.65□□□□□ -0.7
PCDHA4-202ENST00000512229 NPFFR1Q9GZQ6 430 aa10.65□□□□□ -0.7
PCDHA4-202ENST00000512229 TMEM14BQ9NUH8 114 aa10.65□□□□□ -0.7
PCDHA4-202ENST00000512229 KAAG1Q9UBP8 84 aa10.65□□□□□ -0.7
PCDHA4-202ENST00000512229 EPDR1Q9UM22 224 aa10.65□□□□□ -0.7
PCDHA4-202ENST00000512229 GPX1P07203 203 aa10.65□□□□□ -0.7
PCDHA4-202ENST00000512229 CD99P14209 185 aa10.65□□□□□ -0.7
PCDHA4-202ENST00000512229 AREGP15514 252 aa10.65□□□□□ -0.7
PCDHA4-202ENST00000512229 BRD3OSQ6XYD6 125 aa10.65□□□□□ -0.7
PCDHA4-202ENST00000512229 TMEM219Q86XT9 240 aa10.65□□□□□ -0.7
PCDHA4-202ENST00000512229 TMEM116Q8NCL8 245 aa10.65□□□□□ -0.7
PCDHA4-202ENST00000512229 AGMATQ9BSE5 352 aa10.65□□□□□ -0.7
PCDHA4-202ENST00000512229 SHISA9B4DS77 424 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms