RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 MZT2BQ6NZ67 158 aa8.29□□□□□ -1.08
RNF4-216ENST00000511859 ZNF66Q6ZN08 573 aa8.29□□□□□ -1.08
RNF4-216ENST00000511859 ZNF767PQ75MW2 155 aa8.29□□□□□ -1.08
RNF4-216ENST00000511859 TCF24Q7RTU0 167 aa8.29□□□□□ -1.08
RNF4-216ENST00000511859 TRPT1Q86TN4 253 aaKnown RBP8.29□□□□□ -1.08
RNF4-216ENST00000511859 SPAG16Q8N0X2 631 aa8.29□□□□□ -1.08
RNF4-216ENST00000511859 ZBTB34Q8NCN2 500 aa8.29□□□□□ -1.08
RNF4-216ENST00000511859 DUSP18Q8NEJ0 188 aa8.29□□□□□ -1.08
RNF4-216ENST00000511859 SCARB1Q8WTV0 552 aa8.29□□□□□ -1.08
RNF4-216ENST00000511859 DEDD2Q8WXF8 326 aa8.29□□□□□ -1.08
RNF4-216ENST00000511859 SCRT1Q9BWW7 348 aa8.29□□□□□ -1.08
RNF4-216ENST00000511859 MS4A6AQ9H2W1 248 aa8.29□□□□□ -1.08
RNF4-216ENST00000511859 COPZ2Q9P299 210 aa8.29□□□□□ -1.08
RNF4-216ENST00000511859 TRAV6A0A075B6T7 132 aa8.28□□□□□ -1.08
RNF4-216ENST00000511859 TEX13DA0A0J9YY54 714 aaPredicted RBP8.28□□□□□ -1.08
RNF4-216ENST00000511859 F8W735 103 aaPredicted RBP8.28□□□□□ -1.08
RNF4-216ENST00000511859 YIF1AO95070 293 aa8.28□□□□□ -1.08
RNF4-216ENST00000511859 MSMO1Q15800 293 aa8.28□□□□□ -1.08
RNF4-216ENST00000511859 SP6Q3SY56 376 aa8.28□□□□□ -1.08
RNF4-216ENST00000511859 Q56UQ5 140 aa8.28□□□□□ -1.08
RNF4-216ENST00000511859 CCDC71LQ8N9Z2 235 aa8.28□□□□□ -1.08
RNF4-216ENST00000511859 UBAC2Q8NBM4 344 aa8.28□□□□□ -1.08
RNF4-216ENST00000511859 CSNK1G2-AS1Q8NCQ2 148 aa8.28□□□□□ -1.08
RNF4-216ENST00000511859 TMEM230Q96A57 120 aa8.28□□□□□ -1.08
RNF4-216ENST00000511859 QTRT1Q9BXR0 403 aaKnown RBP8.28□□□□□ -1.08
RNF4-216ENST00000511859 PRR13Q9NZ81 148 aa8.28□□□□□ -1.08
RNF4-216ENST00000511859 IGHV3-49A0A0A0MS15 119 aa8.27□□□□□ -1.09
RNF4-216ENST00000511859 FAM240BA0A1B0GVZ2 78 aa8.27□□□□□ -1.09
RNF4-216ENST00000511859 EPM2AB3EWF7 344 aa8.27□□□□□ -1.09
RNF4-216ENST00000511859 NUPL2O15504 423 aaKnown RBP8.27□□□□□ -1.09
RNF4-216ENST00000511859 NDUFB6O95139 128 aa8.27□□□□□ -1.09
RNF4-216ENST00000511859 TCRBP04435 133 aa8.27□□□□□ -1.09
RNF4-216ENST00000511859 OR13C7P0DN81 318 aa8.27□□□□□ -1.09
RNF4-216ENST00000511859 F2RP25116 425 aa8.27□□□□□ -1.09
RNF4-216ENST00000511859 LPAR6P43657 344 aa8.27□□□□□ -1.09
RNF4-216ENST00000511859 FAM3BP58499 235 aaPredicted RBP8.27□□□□□ -1.09
RNF4-216ENST00000511859 DEFA1P59665 94 aa8.27□□□□□ -1.09
RNF4-216ENST00000511859 DEFA3P59666 94 aa8.27□□□□□ -1.09
RNF4-216ENST00000511859 RND3P61587 244 aa8.27□□□□□ -1.09
RNF4-216ENST00000511859 SURF2Q15527 256 aaPredicted RBP8.27□□□□□ -1.09
RNF4-216ENST00000511859 OR10W1Q8NGF6 305 aa8.27□□□□□ -1.09
RNF4-216ENST00000511859 ENKURQ8TC29 256 aa8.27□□□□□ -1.09
RNF4-216ENST00000511859 ZNF486Q96H40 463 aaPredicted RBP8.27□□□□□ -1.09
RNF4-216ENST00000511859 ZNF414Q96IQ9 312 aa8.27□□□□□ -1.09
RNF4-216ENST00000511859 SCGB3A2Q96PL1 93 aa8.27□□□□□ -1.09
RNF4-216ENST00000511859 TP53RKQ96S44 253 aa8.27□□□□□ -1.09
RNF4-216ENST00000511859 SLC25A21Q9BQT8 299 aaPredicted RBP8.27□□□□□ -1.09
RNF4-216ENST00000511859 IGHV3-21A0A0B4J1V1 117 aa8.26□□□□□ -1.09
RNF4-216ENST00000511859 C3orf85A0A1B0GTC6 90 aa8.26□□□□□ -1.09
RNF4-216ENST00000511859 UPK2O00526 184 aa8.26□□□□□ -1.09
RNF4-216ENST00000511859 OR5AC1P0C628 307 aa8.26□□□□□ -1.09
RNF4-216ENST00000511859 SPART-AS1P0CW21 52 aa8.26□□□□□ -1.09
RNF4-216ENST00000511859 TRAPPC2P0DI81 140 aa8.26□□□□□ -1.09
RNF4-216ENST00000511859 TRAPPC2BP0DI82 140 aa8.26□□□□□ -1.09
RNF4-216ENST00000511859 ANXA7P20073 488 aaKnown RBP8.26□□□□□ -1.09
RNF4-216ENST00000511859 NRARPQ7Z6K4 114 aa8.26□□□□□ -1.09
RNF4-216ENST00000511859 C20orf85Q9H1P6 137 aa8.26□□□□□ -1.09
RNF4-216ENST00000511859 VSIRQ9H7M9 311 aa8.26□□□□□ -1.09
RNF4-216ENST00000511859 NUDT15Q9NV35 164 aa8.26□□□□□ -1.09
RNF4-216ENST00000511859 F11RQ9Y624 299 aaKnown RBP8.26□□□□□ -1.09
RNF4-216ENST00000511859 IGHV3OR16-13A0A075B7E8 117 aa8.25□□□□□ -1.09
RNF4-216ENST00000511859 IGHV3-74A0A0B4J1X5 117 aa8.25□□□□□ -1.09
RNF4-216ENST00000511859 TRAV3A0A0B4J244 114 aa8.25□□□□□ -1.09
RNF4-216ENST00000511859 CRYM-AS1A6NIL9 109 aa8.25□□□□□ -1.09
RNF4-216ENST00000511859 K7EIM0 57 aa8.25□□□□□ -1.09
RNF4-216ENST00000511859 ST8SIA3O43173 380 aa8.25□□□□□ -1.09
RNF4-216ENST00000511859 INAFM2P0DMQ5 153 aa8.25□□□□□ -1.09
RNF4-216ENST00000511859 NQO2P16083 231 aa8.25□□□□□ -1.09
RNF4-216ENST00000511859 C4BPBP20851 252 aa8.25□□□□□ -1.09
RNF4-216ENST00000511859 VAMP1P23763 118 aa8.25□□□□□ -1.09
RNF4-216ENST00000511859 TAS2R31P59538 309 aa8.25□□□□□ -1.09
RNF4-216ENST00000511859 RPL11P62913 178 aaKnown RBP8.25□□□□□ -1.09
RNF4-216ENST00000511859 WT1-ASQ06250 92 aa8.25□□□□□ -1.09
RNF4-216ENST00000511859 POU2AF1Q16633 256 aa8.25□□□□□ -1.09
RNF4-216ENST00000511859 C6orf223Q8N319 242 aa8.25□□□□□ -1.09
RNF4-216ENST00000511859 TXN2Q99757 166 aa8.25□□□□□ -1.09
RNF4-216ENST00000511859 GINS3Q9BRX5 216 aa8.25□□□□□ -1.09
RNF4-216ENST00000511859 NAA60Q9H7X0 242 aa8.25□□□□□ -1.09
RNF4-216ENST00000511859 CLEC5AQ9NY25 188 aa8.25□□□□□ -1.09
RNF4-216ENST00000511859 VPS13BQ7Z7G8 4022 aa8.25□□□□□ -1.09
RNF4-216ENST00000511859 RBFOX2O43251 390 aaKnown RBP eCLIP8.24□□□□□ -1.09
RNF4-216ENST00000511859 HPRT1P00492 218 aa8.24□□□□□ -1.09
RNF4-216ENST00000511859 KRASP01116 189 aa8.24□□□□□ -1.09
RNF4-216ENST00000511859 IGKV1-39P01597 117 aa8.24□□□□□ -1.09
RNF4-216ENST00000511859 IGKV1D-39P04432 117 aa8.24□□□□□ -1.09
RNF4-216ENST00000511859 H2AFB2P0C5Z0 115 aa8.24□□□□□ -1.09
RNF4-216ENST00000511859 G6PCP35575 357 aa8.24□□□□□ -1.09
RNF4-216ENST00000511859 SUPT4H1P63272 117 aaKnown RBP8.24□□□□□ -1.09
RNF4-216ENST00000511859 PPP1R1AQ13522 171 aa8.24□□□□□ -1.09
RNF4-216ENST00000511859 TRIM16LQ309B1 348 aa8.24□□□□□ -1.09
RNF4-216ENST00000511859 LILRB2Q8N423 598 aa8.24□□□□□ -1.09
RNF4-216ENST00000511859 FAM24BQ8N5W8 94 aa8.24□□□□□ -1.09
RNF4-216ENST00000511859 DMBX1Q8NFW5 382 aa8.24□□□□□ -1.09
RNF4-216ENST00000511859 OR1L8Q8NGR8 309 aa8.24□□□□□ -1.09
RNF4-216ENST00000511859 ST8SIA2Q92186 375 aa8.24□□□□□ -1.09
RNF4-216ENST00000511859 GRAMD2BQ96HH9 432 aa8.24□□□□□ -1.09
RNF4-216ENST00000511859 C1QTNF4Q9BXJ3 329 aa8.24□□□□□ -1.09
RNF4-216ENST00000511859 MYCBP2O75592 4640 aa8.24□□□□□ -1.09
RNF4-216ENST00000511859 TEX50A0A1B0GTY4 177 aa8.23□□□□□ -1.09
RNF4-216ENST00000511859 TMEM189A5PLL7 270 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms