RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 VCXQ9H320 206 aa13.31□□□□□ -0.28
HMGCS1-206ENST00000511774 SEPSECSQ9HD40 501 aaKnown RBP13.31□□□□□ -0.28
HMGCS1-206ENST00000511774 IFT46Q9NQC8 304 aa13.31□□□□□ -0.28
HMGCS1-206ENST00000511774 LINC00588Q9Y4M8 146 aa13.31□□□□□ -0.28
HMGCS1-206ENST00000511774 PRM2P04554 102 aa13.3□□□□□ -0.28
HMGCS1-206ENST00000511774 IGLC1P0CG04 106 aa13.3□□□□□ -0.28
HMGCS1-206ENST00000511774 NKX2-1P43699 371 aaPredicted RBP13.3□□□□□ -0.28
HMGCS1-206ENST00000511774 EIF2B2P49770 351 aaKnown RBP13.3□□□□□ -0.28
HMGCS1-206ENST00000511774 IDNKQ5T6J7 187 aa13.3□□□□□ -0.28
HMGCS1-206ENST00000511774 NAT1P18440 290 aa13.29□□□□□ -0.28
HMGCS1-206ENST00000511774 ETV6P41212 452 aa13.29□□□□□ -0.28
HMGCS1-206ENST00000511774 AP2S1P53680 142 aaPredicted RBP13.29□□□□□ -0.28
HMGCS1-206ENST00000511774 DHODHQ02127 395 aa13.29□□□□□ -0.28
HMGCS1-206ENST00000511774 BSXQ3C1V8 233 aa13.29□□□□□ -0.28
HMGCS1-206ENST00000511774 LYSMD2Q8IV50 215 aa13.29□□□□□ -0.28
HMGCS1-206ENST00000511774 SLC35G3Q8N808 338 aa13.29□□□□□ -0.28
HMGCS1-206ENST00000511774 OR5H2Q8NGV7 314 aa13.29□□□□□ -0.28
HMGCS1-206ENST00000511774 WDR12Q9GZL7 423 aaKnown RBP13.29□□□□□ -0.28
HMGCS1-206ENST00000511774 SAV1Q9H4B6 383 aaPredicted RBP13.29□□□□□ -0.28
HMGCS1-206ENST00000511774 BUB3O43684 328 aa13.28□□□□□ -0.28
HMGCS1-206ENST00000511774 RPL5P46777 297 aaKnown RBP13.28□□□□□ -0.28
HMGCS1-206ENST00000511774 SCAND1P57086 179 aa13.28□□□□□ -0.28
HMGCS1-206ENST00000511774 SIGLEC15Q6ZMC9 328 aa13.28□□□□□ -0.28
HMGCS1-206ENST00000511774 DIABLOQ9NR28 239 aa13.28□□□□□ -0.28
HMGCS1-206ENST00000511774 CORTO00230 105 aa13.27□□□□□ -0.29
HMGCS1-206ENST00000511774 NXPH3O95157 252 aa13.27□□□□□ -0.29
HMGCS1-206ENST00000511774 HBE1P02100 147 aa13.27□□□□□ -0.29
HMGCS1-206ENST00000511774 HRH1P35367 487 aa13.27□□□□□ -0.29
HMGCS1-206ENST00000511774 PRSS54Q6PEW0 395 aa13.27□□□□□ -0.29
HMGCS1-206ENST00000511774 OR6F1Q8NGZ6 308 aa13.27□□□□□ -0.29
HMGCS1-206ENST00000511774 RPS10-NUDT3A0A1W2PQS6 291 aa13.26□□□□□ -0.29
HMGCS1-206ENST00000511774 F6UB75 175 aa13.26□□□□□ -0.29
HMGCS1-206ENST00000511774 NUDT3O95989 172 aa13.26□□□□□ -0.29
HMGCS1-206ENST00000511774 FUSP35637 526 aaKnown RBP eCLIP13.26□□□□□ -0.29
HMGCS1-206ENST00000511774 RND2P52198 227 aa13.26□□□□□ -0.29
HMGCS1-206ENST00000511774 ZNF79Q15937 498 aa13.26□□□□□ -0.29
HMGCS1-206ENST00000511774 OR4B1Q8NGF8 309 aa13.26□□□□□ -0.29
HMGCS1-206ENST00000511774 CLUHP3Q96NS8 147 aa13.26□□□□□ -0.29
HMGCS1-206ENST00000511774 A0A0G2JRQ6 117 aa13.25□□□□□ -0.29
HMGCS1-206ENST00000511774 IL4P05112 153 aa13.25□□□□□ -0.29
HMGCS1-206ENST00000511774 HLA-DMAP28067 261 aa13.25□□□□□ -0.29
HMGCS1-206ENST00000511774 HOXA1P49639 335 aaPredicted RBP13.25□□□□□ -0.29
HMGCS1-206ENST00000511774 XGP55808 180 aa13.25□□□□□ -0.29
HMGCS1-206ENST00000511774 TAS2R46P59540 309 aa13.25□□□□□ -0.29
HMGCS1-206ENST00000511774 TAS2R20P59543 309 aa13.25□□□□□ -0.29
HMGCS1-206ENST00000511774 YPEL3P61236 119 aaPredicted RBP13.25□□□□□ -0.29
HMGCS1-206ENST00000511774 RRN3P1Q2M238 152 aa13.25□□□□□ -0.29
HMGCS1-206ENST00000511774 FOXI2Q6ZQN5 318 aa13.25□□□□□ -0.29
HMGCS1-206ENST00000511774 OR1S2Q8NGQ3 325 aa13.25□□□□□ -0.29
HMGCS1-206ENST00000511774 Q8WTZ3 238 aa13.25□□□□□ -0.29
HMGCS1-206ENST00000511774 LINC00052Q96N35 136 aa13.25□□□□□ -0.29
HMGCS1-206ENST00000511774 GOLT1BQ9Y3E0 138 aa13.25□□□□□ -0.29
HMGCS1-206ENST00000511774 UBR4Q5T4S7 5183 aa13.25□□□□□ -0.29
HMGCS1-206ENST00000511774 TRAV30A0A087WSZ9 112 aa13.24□□□□□ -0.29
HMGCS1-206ENST00000511774 SOCS3O14543 225 aa13.24□□□□□ -0.29
HMGCS1-206ENST00000511774 PSMB9P28065 219 aa13.24□□□□□ -0.29
HMGCS1-206ENST00000511774 OR10J1P30954 320 aa13.24□□□□□ -0.29
HMGCS1-206ENST00000511774 SUB1P53999 127 aaKnown RBP eCLIP13.24□□□□□ -0.29
HMGCS1-206ENST00000511774 C7orf50Q9BRJ6 194 aaKnown RBP13.24□□□□□ -0.29
HMGCS1-206ENST00000511774 SSR3Q9UNL2 185 aa13.24□□□□□ -0.29
HMGCS1-206ENST00000511774 ELK1P19419 428 aa13.23□□□□□ -0.29
HMGCS1-206ENST00000511774 ALDH3B2P48448 385 aa13.23□□□□□ -0.29
HMGCS1-206ENST00000511774 RORCP51449 518 aa13.23□□□□□ -0.29
HMGCS1-206ENST00000511774 PSG9Q00887 426 aa13.23□□□□□ -0.29
HMGCS1-206ENST00000511774 FCN2Q15485 313 aa13.23□□□□□ -0.29
HMGCS1-206ENST00000511774 FAM78BQ5VT40 261 aa13.23□□□□□ -0.29
HMGCS1-206ENST00000511774 LYPD1Q8N2G4 141 aa13.23□□□□□ -0.29
HMGCS1-206ENST00000511774 TMEM170AQ8WVE7 144 aa13.23□□□□□ -0.29
HMGCS1-206ENST00000511774 TP53RKQ96S44 253 aa13.23□□□□□ -0.29
HMGCS1-206ENST00000511774 ZNF705GA8MUZ8 300 aaPredicted RBP13.22□□□□□ -0.29
HMGCS1-206ENST00000511774 F5H768 121 aa13.22□□□□□ -0.29
HMGCS1-206ENST00000511774 EBAG9O00559 213 aa13.22□□□□□ -0.29
HMGCS1-206ENST00000511774 DLK1P80370 383 aa13.22□□□□□ -0.29
HMGCS1-206ENST00000511774 Q5VSD8 79 aa13.22□□□□□ -0.29
HMGCS1-206ENST00000511774 SSX7Q7RTT5 188 aa13.22□□□□□ -0.29
HMGCS1-206ENST00000511774 RNF141Q8WVD5 230 aa13.22□□□□□ -0.29
HMGCS1-206ENST00000511774 PLAC8L1A1L4L8 177 aa13.21□□□□□ -0.29
HMGCS1-206ENST00000511774 DEFB130BP0DP73 79 aa13.21□□□□□ -0.29
HMGCS1-206ENST00000511774 DEFB130AP0DP74 79 aa13.21□□□□□ -0.29
HMGCS1-206ENST00000511774 PI3P19957 117 aa13.21□□□□□ -0.29
HMGCS1-206ENST00000511774 BTF3P20290 206 aaKnown RBP13.21□□□□□ -0.29
HMGCS1-206ENST00000511774 AMTNQ6UX39 209 aa13.21□□□□□ -0.29
HMGCS1-206ENST00000511774 OR51G1Q8NGK1 321 aa13.21□□□□□ -0.29
HMGCS1-206ENST00000511774 GPR146Q96CH1 333 aa13.21□□□□□ -0.29
HMGCS1-206ENST00000511774 CNBD2Q96M20 576 aa13.21□□□□□ -0.29
HMGCS1-206ENST00000511774 Q9H8V8 135 aa13.21□□□□□ -0.29
HMGCS1-206ENST00000511774 SCGB2A1O75556 95 aa13.2□□□□□ -0.3
HMGCS1-206ENST00000511774 HSPA13P48723 471 aa13.2□□□□□ -0.3
HMGCS1-206ENST00000511774 AKR1C2P52895 323 aa13.2□□□□□ -0.3
HMGCS1-206ENST00000511774 PAX9P55771 341 aa13.2□□□□□ -0.3
HMGCS1-206ENST00000511774 CCL18P55774 89 aa13.2□□□□□ -0.3
HMGCS1-206ENST00000511774 UCP3P55916 312 aa13.2□□□□□ -0.3
HMGCS1-206ENST00000511774 LPCAT3Q6P1A2 487 aa13.2□□□□□ -0.3
HMGCS1-206ENST00000511774 SPARTQ8N0X7 666 aa13.2□□□□□ -0.3
HMGCS1-206ENST00000511774 NPIPB3Q92617 1050 aa13.2□□□□□ -0.3
HMGCS1-206ENST00000511774 C20orf173Q96LM9 149 aa13.2□□□□□ -0.3
HMGCS1-206ENST00000511774 MAGT1Q9H0U3 335 aa13.2□□□□□ -0.3
HMGCS1-206ENST00000511774 SCPEP1Q9HB40 452 aa13.2□□□□□ -0.3
HMGCS1-206ENST00000511774 KLK11Q9UBX7 282 aa13.2□□□□□ -0.3
HMGCS1-206ENST00000511774 A0A0J9YX75 114 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms