RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 NPIPB3Q92617 1050 aa12.02□□□□□ -0.49
PDLIM5-216ENST00000511767 CITED4Q96RK1 184 aa12.02□□□□□ -0.49
PDLIM5-216ENST00000511767 GINS3Q9BRX5 216 aa12.02□□□□□ -0.49
PDLIM5-216ENST00000511767 ANXA7P20073 488 aaKnown RBP12.01□□□□□ -0.49
PDLIM5-216ENST00000511767 NPPCP23582 126 aa12.01□□□□□ -0.49
PDLIM5-216ENST00000511767 GPX4P36969 197 aaPredicted RBP12.01□□□□□ -0.49
PDLIM5-216ENST00000511767 RND2P52198 227 aa12.01□□□□□ -0.49
PDLIM5-216ENST00000511767 YPEL3P61236 119 aaPredicted RBP12.01□□□□□ -0.49
PDLIM5-216ENST00000511767 ID3Q02535 119 aa12.01□□□□□ -0.49
PDLIM5-216ENST00000511767 DHRS2Q13268 280 aa12.01□□□□□ -0.49
PDLIM5-216ENST00000511767 OR1S2Q8NGQ3 325 aa12.01□□□□□ -0.49
PDLIM5-216ENST00000511767 ST8SIA2Q92186 375 aa12.01□□□□□ -0.49
PDLIM5-216ENST00000511767 SPATA25Q9BR10 227 aa12.01□□□□□ -0.49
PDLIM5-216ENST00000511767 CRYBB3P26998 211 aa12□□□□□ -0.49
PDLIM5-216ENST00000511767 LYG2Q86SG7 212 aa12□□□□□ -0.49
PDLIM5-216ENST00000511767 Q8WTZ3 238 aa12□□□□□ -0.49
PDLIM5-216ENST00000511767 FAM110AQ9BQ89 295 aa12□□□□□ -0.49
PDLIM5-216ENST00000511767 U3KQE9 123 aa12□□□□□ -0.49
PDLIM5-216ENST00000511767 OR4C46A6NHA9 309 aa11.99□□□□□ -0.49
PDLIM5-216ENST00000511767 LYRM1O43325 122 aa11.99□□□□□ -0.49
PDLIM5-216ENST00000511767 MED6O75586 246 aa11.99□□□□□ -0.49
PDLIM5-216ENST00000511767 ADAP1O75689 374 aa11.99□□□□□ -0.49
PDLIM5-216ENST00000511767 DFFBO76075 338 aa11.99□□□□□ -0.49
PDLIM5-216ENST00000511767 IFNA4P05014 189 aa11.99□□□□□ -0.49
PDLIM5-216ENST00000511767 CD5P06127 495 aa11.99□□□□□ -0.49
PDLIM5-216ENST00000511767 OR10J1P30954 320 aa11.99□□□□□ -0.49
PDLIM5-216ENST00000511767 GAMTQ14353 236 aa11.99□□□□□ -0.49
PDLIM5-216ENST00000511767 ODF3L2Q3SX64 289 aa11.99□□□□□ -0.49
PDLIM5-216ENST00000511767 TCF24Q7RTU0 167 aa11.99□□□□□ -0.49
PDLIM5-216ENST00000511767 MAGT1Q9H0U3 335 aa11.99□□□□□ -0.49
PDLIM5-216ENST00000511767 IGHV3-66A0A0C4DH42 116 aa11.98□□□□□ -0.49
PDLIM5-216ENST00000511767 MPTX1A8MV57 137 aa11.98□□□□□ -0.49
PDLIM5-216ENST00000511767 SYNGR2O43760 224 aa11.98□□□□□ -0.49
PDLIM5-216ENST00000511767 TCRBP04435 133 aa11.98□□□□□ -0.49
PDLIM5-216ENST00000511767 IAPPP10997 89 aa11.98□□□□□ -0.49
PDLIM5-216ENST00000511767 CMC4P56277 68 aaPredicted RBP11.98□□□□□ -0.49
PDLIM5-216ENST00000511767 COQ8AQ8NI60 647 aa11.98□□□□□ -0.49
PDLIM5-216ENST00000511767 ACY3Q96HD9 319 aa11.98□□□□□ -0.49
PDLIM5-216ENST00000511767 CCDC32Q9BV29 185 aa11.98□□□□□ -0.49
PDLIM5-216ENST00000511767 EDA2RQ9HAV5 297 aa11.98□□□□□ -0.49
PDLIM5-216ENST00000511767 UBQLN2Q9UHD9 624 aa11.98□□□□□ -0.49
PDLIM5-216ENST00000511767 DNAH7Q8WXX0 4024 aa11.97□□□□□ -0.49
PDLIM5-216ENST00000511767 LOC102724200A0A096LPH7 203 aaPredicted RBP11.97□□□□□ -0.49
PDLIM5-216ENST00000511767 A0A1W2PS18 150 aa11.97□□□□□ -0.49
PDLIM5-216ENST00000511767 WRBO00258 174 aa11.97□□□□□ -0.49
PDLIM5-216ENST00000511767 SCGB2A1O75556 95 aa11.97□□□□□ -0.49
PDLIM5-216ENST00000511767 RD3LP0DJH9 198 aa11.97□□□□□ -0.49
PDLIM5-216ENST00000511767 C4orf46Q504U0 113 aa11.97□□□□□ -0.49
PDLIM5-216ENST00000511767 GBGT1Q8N5D6 347 aa11.97□□□□□ -0.49
PDLIM5-216ENST00000511767 MITD1Q8WV92 249 aa11.97□□□□□ -0.49
PDLIM5-216ENST00000511767 CIB3Q96Q77 187 aaPredicted RBP11.97□□□□□ -0.49
PDLIM5-216ENST00000511767 METTL26Q96S19 204 aa11.97□□□□□ -0.49
PDLIM5-216ENST00000511767 IGKV3-7A0A075B6H7 116 aa11.96□□□□□ -0.49
PDLIM5-216ENST00000511767 IGKV1D-37A0A075B6S9 117 aa11.96□□□□□ -0.49
PDLIM5-216ENST00000511767 PSG1P11464 419 aa11.96□□□□□ -0.49
PDLIM5-216ENST00000511767 BMI1P35226 326 aa11.96□□□□□ -0.49
PDLIM5-216ENST00000511767 TFPI2P48307 235 aa11.96□□□□□ -0.49
PDLIM5-216ENST00000511767 RAB11AP62491 216 aa11.96□□□□□ -0.49
PDLIM5-216ENST00000511767 PAFAH1B2P68402 229 aa11.96□□□□□ -0.49
PDLIM5-216ENST00000511767 S100ZQ8WXG8 99 aa11.96□□□□□ -0.49
PDLIM5-216ENST00000511767 GGTLC1Q9BX51 225 aa11.96□□□□□ -0.49
PDLIM5-216ENST00000511767 MS4A6AQ9H2W1 248 aa11.96□□□□□ -0.49
PDLIM5-216ENST00000511767 KMT2CQ8NEZ4 4911 aaKnown RBP11.96□□□□□ -0.5
PDLIM5-216ENST00000511767 C3orf84H3BNL1 204 aa11.95□□□□□ -0.5
PDLIM5-216ENST00000511767 TOMM40O96008 361 aa11.95□□□□□ -0.5
PDLIM5-216ENST00000511767 IFNA21P01568 189 aa11.95□□□□□ -0.5
PDLIM5-216ENST00000511767 WFDC3Q8IUB2 231 aa11.95□□□□□ -0.5
PDLIM5-216ENST00000511767 OR4D5Q8NGN0 318 aa11.95□□□□□ -0.5
PDLIM5-216ENST00000511767 TMEM231Q9H6L2 316 aa11.95□□□□□ -0.5
PDLIM5-216ENST00000511767 RETNQ9HD89 108 aa11.95□□□□□ -0.5
PDLIM5-216ENST00000511767 TRAV6A0A075B6T7 132 aa11.94□□□□□ -0.5
PDLIM5-216ENST00000511767 TRAV2A0A0B4J234 112 aa11.94□□□□□ -0.5
PDLIM5-216ENST00000511767 PRSS46E5RG02 174 aa11.94□□□□□ -0.5
PDLIM5-216ENST00000511767 PAX9P55771 341 aa11.94□□□□□ -0.5
PDLIM5-216ENST00000511767 POLR2GP62487 172 aaKnown RBP eCLIP11.94□□□□□ -0.5
PDLIM5-216ENST00000511767 RPP30P78346 268 aaKnown RBP11.94□□□□□ -0.5
PDLIM5-216ENST00000511767 USF2Q15853 346 aaPredicted RBP11.94□□□□□ -0.5
PDLIM5-216ENST00000511767 C16orf54Q6UWD8 224 aa11.94□□□□□ -0.5
PDLIM5-216ENST00000511767 APRG1Q8IVJ8 170 aa11.94□□□□□ -0.5
PDLIM5-216ENST00000511767 C20orf85Q9H1P6 137 aa11.94□□□□□ -0.5
PDLIM5-216ENST00000511767 DNASE2O00115 360 aaPredicted RBP11.93□□□□□ -0.5
PDLIM5-216ENST00000511767 IL4P05112 153 aa11.93□□□□□ -0.5
PDLIM5-216ENST00000511767 HNRNPCP07910 306 aaKnown RBP eCLIP11.93□□□□□ -0.5
PDLIM5-216ENST00000511767 NKX2-1P43699 371 aaPredicted RBP11.93□□□□□ -0.5
PDLIM5-216ENST00000511767 P2RY1P47900 373 aa11.93□□□□□ -0.5
PDLIM5-216ENST00000511767 RPL11P62913 178 aaKnown RBP11.93□□□□□ -0.5
PDLIM5-216ENST00000511767 ZNF90Q03938 601 aa11.93□□□□□ -0.5
PDLIM5-216ENST00000511767 ZNF124Q15973 351 aa11.93□□□□□ -0.5
PDLIM5-216ENST00000511767 SPANXN5Q5MJ07 72 aa11.93□□□□□ -0.5
PDLIM5-216ENST00000511767 MUC7Q8TAX7 377 aa11.93□□□□□ -0.5
PDLIM5-216ENST00000511767 SLC35E1Q96K37 410 aa11.93□□□□□ -0.5
PDLIM5-216ENST00000511767 SMIM8Q96KF7 97 aa11.93□□□□□ -0.5
PDLIM5-216ENST00000511767 OVOL2Q9BRP0 275 aa11.93□□□□□ -0.5
PDLIM5-216ENST00000511767 TBC1D24Q9ULP9 559 aa11.93□□□□□ -0.5
PDLIM5-216ENST00000511767 IGKV1OR2-108A0A075B7D4 117 aa11.92□□□□□ -0.5
PDLIM5-216ENST00000511767 BUB3O43684 328 aa11.92□□□□□ -0.5
PDLIM5-216ENST00000511767 H2AFB2P0C5Z0 115 aa11.92□□□□□ -0.5
PDLIM5-216ENST00000511767 FAM24BQ8N5W8 94 aa11.92□□□□□ -0.5
PDLIM5-216ENST00000511767 THAP8Q8NA92 274 aa11.92□□□□□ -0.5
PDLIM5-216ENST00000511767 OR51G1Q8NGK1 321 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms