RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 C10orf126Q8N4M7 172 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 OR4X2Q8NGF9 303 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 OR4A5Q8NH83 315 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 OR9G1Q8NH87 305 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 CNIH3Q8TBE1 160 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 EMC6Q9BV81 110 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 RNASE7Q9H1E1 156 aaKnown RBP4.02□□□□□ -1.77
NUP54-210ENST00000510884 PHPT1Q9NRX4 125 aaPredicted RBP4.02□□□□□ -1.77
NUP54-210ENST00000510884 KCNIP2Q9NS61 270 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 ZNF257Q9Y2Q1 563 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 KLHDC2Q9Y2U9 406 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 OR1A2Q9Y585 309 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 COL18A1P39060 1754 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 MYO5AQ9Y4I1 1855 aaKnown RBP4.01□□□□□ -1.77
NUP54-210ENST00000510884 TRAV9-2A0A087WT02 112 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 TRAV26-2A0A0B4J265 109 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 A0A1W2PPM0 123 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 SRRM5B3KS81 715 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 ZNF732B4DXR9 585 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 SLC17A2O00624 439 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 ARL6IP5O75915 188 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 EIF4EP06730 217 aaKnown RBP4.01□□□□□ -1.77
NUP54-210ENST00000510884 ZNF286BP0CG31 522 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 SLC25A6P12236 298 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 CRYGSP22914 178 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 PSMB8P28062 276 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 HLA-DRB3P79483 266 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 SP4Q02446 784 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 ZNF90Q03938 601 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 TGIF1Q15583 401 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 RRN3P1Q2M238 152 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 FAM201AQ5SY85 155 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 C9orf153Q5TBE3 101 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 HES3Q5TGS1 186 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 LAIR2Q6ISS4 152 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 ZNF322Q6U7Q0 402 aaPredicted RBP4.01□□□□□ -1.77
NUP54-210ENST00000510884 HRCT1Q6UXD1 115 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 DPPA3Q6W0C5 159 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 TIFABQ6ZNK6 161 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 ZNF584Q8IVC4 421 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 ZIC4Q8N9L1 334 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 OR4F17Q8NGA8 305 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 OR10AC1Q8NH08 325 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 FGF14Q92915 247 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 TSACCQ96A04 125 aaPredicted RBP4.01□□□□□ -1.77
NUP54-210ENST00000510884 OR4F4Q96R69 305 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 LINC01587Q99440 93 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 TMEM59Q9BXS4 323 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 IKZF5Q9H5V7 419 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 STARD5Q9NSY2 213 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 TECRQ9NZ01 308 aaKnown RBP4.01□□□□□ -1.77
NUP54-210ENST00000510884 WDR83OSQ9Y284 106 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 KDM3BQ7LBC6 1761 aa4.01□□□□□ -1.77
NUP54-210ENST00000510884 USP9XQ93008 2570 aaPredicted RBP4.01□□□□□ -1.77
NUP54-210ENST00000510884 CDH23Q9H251 3354 aa4□□□□□ -1.77
NUP54-210ENST00000510884 TRAV8-6A0A0B4J262 113 aa4□□□□□ -1.77
NUP54-210ENST00000510884 C3orf85A0A1B0GTC6 90 aa4□□□□□ -1.77
NUP54-210ENST00000510884 A0A1B0GWB2 263 aa4□□□□□ -1.77
NUP54-210ENST00000510884 TRDV1A0A1B0GX56 115 aa4□□□□□ -1.77
NUP54-210ENST00000510884 MYBPHLA2RUH7 354 aa4□□□□□ -1.77
NUP54-210ENST00000510884 KLLNB2CW77 178 aa4□□□□□ -1.77
NUP54-210ENST00000510884 NDUFC2-KCTD14E9PQ53 114 aa4□□□□□ -1.77
NUP54-210ENST00000510884 H3BMG7 143 aa4□□□□□ -1.77
NUP54-210ENST00000510884 APOC4-APOC2K7ER74 178 aa4□□□□□ -1.77
NUP54-210ENST00000510884 MRPS12O15235 138 aaKnown RBP4□□□□□ -1.77
NUP54-210ENST00000510884 RAMP1O60894 148 aa4□□□□□ -1.77
NUP54-210ENST00000510884 ZNF253O75346 499 aa4□□□□□ -1.77
NUP54-210ENST00000510884 CXCL1P09341 107 aa4□□□□□ -1.77
NUP54-210ENST00000510884 ZNF708P17019 499 aa4□□□□□ -1.77
NUP54-210ENST00000510884 H2BFSP57053 126 aa4□□□□□ -1.77
NUP54-210ENST00000510884 PRDX1Q06830 199 aaKnown RBP4□□□□□ -1.77
NUP54-210ENST00000510884 SLC38A11Q08AI6 406 aa4□□□□□ -1.77
NUP54-210ENST00000510884 ARFRP1Q13795 201 aa4□□□□□ -1.77
NUP54-210ENST00000510884 KLF5Q13887 457 aaPredicted RBP4□□□□□ -1.77
NUP54-210ENST00000510884 MSMO1Q15800 293 aa4□□□□□ -1.77
NUP54-210ENST00000510884 VMA21Q3ZAQ7 101 aa4□□□□□ -1.77
NUP54-210ENST00000510884 PSMG4Q5JS54 123 aa4□□□□□ -1.77
NUP54-210ENST00000510884 SAXO1Q8IYX7 474 aa4□□□□□ -1.77
NUP54-210ENST00000510884 OTOSQ8NHW6 89 aa4□□□□□ -1.77
NUP54-210ENST00000510884 ZPLD1Q8TCW7 415 aa4□□□□□ -1.77
NUP54-210ENST00000510884 LINC00526Q96FQ7 95 aa4□□□□□ -1.77
NUP54-210ENST00000510884 TMEM147Q9BVK8 224 aa4□□□□□ -1.77
NUP54-210ENST00000510884 RTL8AQ9BWD3 113 aa4□□□□□ -1.77
NUP54-210ENST00000510884 GNB4Q9HAV0 340 aa4□□□□□ -1.77
NUP54-210ENST00000510884 MARCOQ9UEW3 520 aaPredicted RBP4□□□□□ -1.77
NUP54-210ENST00000510884 OARD1Q9Y530 152 aa4□□□□□ -1.77
NUP54-210ENST00000510884 CHCHD2Q9Y6H1 151 aaPredicted RBP4□□□□□ -1.77
NUP54-210ENST00000510884 NHSQ6T4R5 1651 aa4□□□□□ -1.77
NUP54-210ENST00000510884 WDFY4Q6ZS81 3184 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 TRAV9-1A0A075B6T8 112 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 SHISA9B4DS77 424 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 C2CD4DB7Z1M9 353 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 J3QQQ9 107 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 CCL21O00585 134 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 GNGT2O14610 69 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 SOCS1O15524 211 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 DUSP14O95147 198 aaKnown RBP3.99□□□□□ -1.77
NUP54-210ENST00000510884 IGKV3-15P01624 115 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 P01737 135 aa3.99□□□□□ -1.77
NUP54-210ENST00000510884 FGF1P05230 155 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms