RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 S100A13Q99584 98 aa7.73□□□□□ -1.17
USP53-207ENST00000510852 SELENOIQ9C0D9 397 aa7.73□□□□□ -1.17
USP53-207ENST00000510852 ZNF331Q9NQX6 463 aaPredicted RBP7.73□□□□□ -1.17
USP53-207ENST00000510852 RNF7Q9UBF6 113 aa7.73□□□□□ -1.17
USP53-207ENST00000510852 SOX21Q9Y651 276 aaPredicted RBP7.73□□□□□ -1.17
USP53-207ENST00000510852 H0YJW9 148 aa7.73□□□□□ -1.17
USP53-207ENST00000510852 H3BSH0 61 aa7.73□□□□□ -1.17
USP53-207ENST00000510852 CECR9P0C854 216 aa7.73□□□□□ -1.17
USP53-207ENST00000510852 IGLC6P0CF74 106 aa7.73□□□□□ -1.17
USP53-207ENST00000510852 PGAM2P15259 253 aa7.73□□□□□ -1.17
USP53-207ENST00000510852 RAB5AP20339 215 aa7.73□□□□□ -1.17
USP53-207ENST00000510852 RPS11P62280 158 aaKnown RBP eCLIP7.73□□□□□ -1.17
USP53-207ENST00000510852 FABP5Q01469 135 aa7.73□□□□□ -1.17
USP53-207ENST00000510852 SSC4DQ8WTU2 575 aa7.73□□□□□ -1.17
USP53-207ENST00000510852 CYSLTR1Q9Y271 337 aa7.73□□□□□ -1.17
USP53-207ENST00000510852 NPFFO15130 113 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 HLA-DPB1P04440 258 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 LSM3P62310 102 aaKnown RBP7.72□□□□□ -1.17
USP53-207ENST00000510852 EIF5AP63241 154 aaKnown RBP7.72□□□□□ -1.17
USP53-207ENST00000510852 TMEM91Q6ZNR0 172 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 TMUB2Q71RG4 321 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 FBXL14Q8N1E6 418 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 ZDHHC22Q8N966 263 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 OR10AC1Q8NH08 325 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 OR51E1Q8TCB6 317 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 Q8TCH9 128 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 ADAT3Q96EY9 351 aaPredicted RBP7.72□□□□□ -1.17
USP53-207ENST00000510852 GNB1LQ9BYB4 327 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 OR10A2Q9H208 303 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 TUBA4BQ9H853 241 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 LOC107986453A0A1B0GWG9 222 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 TRDV1A0A1B0GX56 115 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 C7orf71A4D174 169 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 GABARAPO95166 117 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 APOHP02749 345 aaPredicted RBP7.72□□□□□ -1.17
USP53-207ENST00000510852 ZNF728P0DKX0 622 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 CFHR3Q02985 330 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 CTF1Q16619 201 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 FAM201AQ5SY85 155 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 TMEM244Q5VVB8 128 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 EIF5AL1Q6IS14 154 aaKnown RBP7.72□□□□□ -1.17
USP53-207ENST00000510852 FOXI2Q6ZQN5 318 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 SSX8Q7RTT4 187 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 ZNF101Q8IZC7 436 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 FRZBQ92765 325 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 RARRES2Q99969 163 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 SAMD10Q9BYL1 202 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 PRR14LQ5THK1 2151 aa7.72□□□□□ -1.17
USP53-207ENST00000510852 NGFP01138 241 aa7.71□□□□□ -1.17
USP53-207ENST00000510852 LCNL1Q6ZST4 164 aa7.71□□□□□ -1.17
USP53-207ENST00000510852 CEACAM19Q7Z692 300 aa7.71□□□□□ -1.17
USP53-207ENST00000510852 LINC01560Q8TB33 94 aa7.71□□□□□ -1.17
USP53-207ENST00000510852 LYZL4Q96KX0 146 aa7.71□□□□□ -1.17
USP53-207ENST00000510852 CIB3Q96Q77 187 aaPredicted RBP7.71□□□□□ -1.17
USP53-207ENST00000510852 OR4C12Q96R67 309 aa7.71□□□□□ -1.17
USP53-207ENST00000510852 CHST6Q9GZX3 395 aa7.71□□□□□ -1.17
USP53-207ENST00000510852 TXNL4BQ9NX01 149 aaKnown RBP7.71□□□□□ -1.17
USP53-207ENST00000510852 VAX2Q9UIW0 290 aa7.71□□□□□ -1.17
USP53-207ENST00000510852 TRBV5-5A0A0J9YX44 114 aa7.71□□□□□ -1.18
USP53-207ENST00000510852 DHRS3O75911 302 aa7.71□□□□□ -1.18
USP53-207ENST00000510852 IGLV3-1P01715 115 aa7.71□□□□□ -1.18
USP53-207ENST00000510852 Q499Y3 187 aa7.71□□□□□ -1.18
USP53-207ENST00000510852 RNASE12Q5GAN4 147 aaKnown RBP7.71□□□□□ -1.18
USP53-207ENST00000510852 MEIG1Q5JSS6 88 aa7.71□□□□□ -1.18
USP53-207ENST00000510852 SLC35E4Q6ICL7 350 aa7.71□□□□□ -1.18
USP53-207ENST00000510852 ZNF429Q86V71 674 aa7.71□□□□□ -1.18
USP53-207ENST00000510852 ZNF705GA8MUZ8 300 aaPredicted RBP7.7□□□□□ -1.18
USP53-207ENST00000510852 B4DEV8 164 aa7.7□□□□□ -1.18
USP53-207ENST00000510852 FABP4P15090 132 aa7.7□□□□□ -1.18
USP53-207ENST00000510852 CCL1P22362 96 aa7.7□□□□□ -1.18
USP53-207ENST00000510852 ZNF92Q03936 586 aa7.7□□□□□ -1.18
USP53-207ENST00000510852 CATR1Q13166 79 aa7.7□□□□□ -1.18
USP53-207ENST00000510852 GGTLC1Q9BX51 225 aa7.7□□□□□ -1.18
USP53-207ENST00000510852 MYO18BQ8IUG5 2567 aa7.7□□□□□ -1.18
USP53-207ENST00000510852 CHD3Q12873 2000 aaKnown RBP7.7□□□□□ -1.18
USP53-207ENST00000510852 FLNCQ14315 2725 aa7.7□□□□□ -1.18
USP53-207ENST00000510852 K7EPK0 472 aa7.7□□□□□ -1.18
USP53-207ENST00000510852 LMX1BO60663 402 aa7.7□□□□□ -1.18
USP53-207ENST00000510852 NDUFC2O95298 119 aa7.7□□□□□ -1.18
USP53-207ENST00000510852 Q6ZTK2 550 aa7.7□□□□□ -1.18
USP53-207ENST00000510852 FAM71E2Q8N5Q1 922 aa7.7□□□□□ -1.18
USP53-207ENST00000510852 ZC2HC1AQ96GY0 325 aa7.7□□□□□ -1.18
USP53-207ENST00000510852 YTHDF2Q9Y5A9 579 aaKnown RBP7.7□□□□□ -1.18
USP53-207ENST00000510852 TRAV26-2A0A0B4J265 109 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 DPRXA6NFQ7 191 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 F6UB75 175 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 H7C1H1 209 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 PIN1P1O15428 100 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 CFDP00746 253 aaPredicted RBP7.69□□□□□ -1.18
USP53-207ENST00000510852 SOD3P08294 240 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 SPINK8P0C7L1 97 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 ZNF626Q68DY1 528 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 UNQ5815/PRO19632Q6UWF5 114 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 SGPP2Q8IWX5 399 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 CIARTQ8N365 385 aaPredicted RBP7.69□□□□□ -1.18
USP53-207ENST00000510852 LINC00482Q8N8I6 264 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 TMEM106AQ96A25 262 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 TMEM147Q9BVK8 224 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 PARP11Q9NR21 331 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 ZNF256Q9Y2P7 627 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms