RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 C19orf71A6NCJ1 209 aa7.44□□□□□ -1.22
PDGFRA-208ENST00000509490 COX7A2P2O60397 106 aa7.44□□□□□ -1.22
PDGFRA-208ENST00000509490 FCN3O75636 299 aa7.44□□□□□ -1.22
PDGFRA-208ENST00000509490 TOMM40O96008 361 aa7.44□□□□□ -1.22
PDGFRA-208ENST00000509490 IGHV3-7P01780 117 aa7.44□□□□□ -1.22
PDGFRA-208ENST00000509490 MORN5Q5VZ52 161 aa7.44□□□□□ -1.22
PDGFRA-208ENST00000509490 TMEM116Q8NCL8 245 aa7.44□□□□□ -1.22
PDGFRA-208ENST00000509490 NUP35Q8NFH5 326 aa7.44□□□□□ -1.22
PDGFRA-208ENST00000509490 PERPQ96FX8 193 aa7.44□□□□□ -1.22
PDGFRA-208ENST00000509490 DPRXA6NFQ7 191 aa7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 C17orf100A8MU93 164 aa7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 SMAD7O15105 426 aaKnown RBP7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 GATA2P23769 480 aaPredicted RBP7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 GNG10P50151 68 aa7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 SLAQ13239 276 aa7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 GDF5OSQ5U4N7 250 aa7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 TMEM200BQ69YZ2 307 aa7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 DEFB123Q8N688 67 aa7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 OR10W1Q8NGF6 305 aa7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 FAM57AQ8TBR7 257 aa7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 FAM122AQ96E09 287 aa7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 SRSF8Q9BRL6 282 aaKnown RBP7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 JKAMPQ9P055 326 aa7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 TMEM14CQ9P0S9 112 aa7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 EPDR1Q9UM22 224 aa7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 PAM16Q9Y3D7 125 aa7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 CORTO00230 105 aa7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 HYPMO75409 117 aa7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 LTAP01374 205 aa7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 FTH1P19P0C7X4 201 aa7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 ZNF25P17030 456 aaPredicted RBP7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 CD33P20138 364 aa7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 FOXA3P55318 350 aaPredicted RBP7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 FXYD3Q14802 87 aa7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 OR2T6Q8NHC8 308 aa7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 SNRNP40Q96DI7 357 aaKnown RBP7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 FMC1Q96HJ9 113 aa7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 HINT2Q9BX68 163 aa7.43□□□□□ -1.22
PDGFRA-208ENST00000509490 INTS1Q8N201 2190 aaKnown RBP7.42□□□□□ -1.22
PDGFRA-208ENST00000509490 TMEM178BH3BS89 294 aa7.42□□□□□ -1.22
PDGFRA-208ENST00000509490 COL8A2P25067 703 aa7.42□□□□□ -1.22
PDGFRA-208ENST00000509490 SRSF6Q13247 344 aaKnown RBP7.42□□□□□ -1.22
PDGFRA-208ENST00000509490 MLANAQ16655 118 aa7.42□□□□□ -1.22
PDGFRA-208ENST00000509490 SPATA45Q537H7 98 aa7.42□□□□□ -1.22
PDGFRA-208ENST00000509490 CHCHD1Q96BP2 118 aaKnown RBP7.42□□□□□ -1.22
PDGFRA-208ENST00000509490 GPR82Q96P67 336 aa7.42□□□□□ -1.22
PDGFRA-208ENST00000509490 GOLT1BQ9Y3E0 138 aa7.42□□□□□ -1.22
PDGFRA-208ENST00000509490 TRIOBPQ9H2D6 2365 aa7.42□□□□□ -1.22
PDGFRA-208ENST00000509490 TRAV5A0A0B4J249 113 aa7.42□□□□□ -1.22
PDGFRA-208ENST00000509490 IGLC7A0M8Q6 106 aa7.42□□□□□ -1.22
PDGFRA-208ENST00000509490 E7EUB6 86 aa7.42□□□□□ -1.22
PDGFRA-208ENST00000509490 RELQ04864 619 aaPredicted RBP7.42□□□□□ -1.22
PDGFRA-208ENST00000509490 VMA21Q3ZAQ7 101 aa7.42□□□□□ -1.22
PDGFRA-208ENST00000509490 TMEM155Q4W5P6 130 aa7.42□□□□□ -1.22
PDGFRA-208ENST00000509490 FAM168AQ92567 244 aa7.42□□□□□ -1.22
PDGFRA-208ENST00000509490 IGHV2-26A0A0B4J1V2 119 aa7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 C2orf70A6NJV1 201 aa7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 GP9P14770 177 aa7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 KRTDAPP60985 99 aa7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 TMEM108Q6UXF1 575 aa7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 ZNF841Q6ZN19 808 aa7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 C5orf17Q8NAS9 161 aa7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 ORAOV1Q8WV07 137 aa7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 TNFRSF19Q9NS68 423 aa7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 TRAV9-2A0A087WT02 112 aa7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 FAM181BA6NEQ2 426 aa7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 RBP4P02753 201 aa7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 MGST1P10620 155 aaKnown RBP7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 PMCHP20382 165 aa7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 CHRNB4P30926 498 aa7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 ADIPOQQ15848 244 aa7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 MRPL54Q6P161 138 aaKnown RBP7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 A0A1W2PPI3 338 aa7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 OVOL3O00110 214 aa7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 SSBP2P81877 361 aaPredicted RBP7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 FAM120AOSQ5T036 256 aa7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 NPIPB3Q92617 1050 aa7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 BORCS7Q96B45 105 aa7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 RNF5Q99942 180 aa7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 CLEC7AQ9BXN2 247 aa7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 RPP21Q9H633 154 aaKnown RBP7.41□□□□□ -1.22
PDGFRA-208ENST00000509490 PPIAL4EA0A075B759 164 aa7.4□□□□□ -1.22
PDGFRA-208ENST00000509490 VWC2LB2RUY7 222 aa7.4□□□□□ -1.22
PDGFRA-208ENST00000509490 PPIAL4DF5H284 164 aa7.4□□□□□ -1.22
PDGFRA-208ENST00000509490 PPIAL4FP0DN26 164 aa7.4□□□□□ -1.22
PDGFRA-208ENST00000509490 PYYP10082 97 aa7.4□□□□□ -1.22
PDGFRA-208ENST00000509490 MFAP2P55001 183 aa7.4□□□□□ -1.22
PDGFRA-208ENST00000509490 DEFB109BQ30KR1 87 aa7.4□□□□□ -1.22
PDGFRA-208ENST00000509490 URB1-AS1Q96HZ7 61 aa7.4□□□□□ -1.22
PDGFRA-208ENST00000509490 NDFIP1Q9BT67 221 aa7.4□□□□□ -1.22
PDGFRA-208ENST00000509490 PPIAL4AQ9Y536 164 aa7.4□□□□□ -1.22
PDGFRA-208ENST00000509490 A8MWL6 223 aa7.4□□□□□ -1.23
PDGFRA-208ENST00000509490 OR5AL1P0C617 328 aa7.4□□□□□ -1.23
PDGFRA-208ENST00000509490 LOXP28300 417 aaPredicted RBP7.4□□□□□ -1.23
PDGFRA-208ENST00000509490 TCL1AP56279 114 aa7.4□□□□□ -1.23
PDGFRA-208ENST00000509490 HBBP68871 147 aa7.4□□□□□ -1.23
PDGFRA-208ENST00000509490 TNXAQ16473 311 aa7.4□□□□□ -1.23
PDGFRA-208ENST00000509490 KIAA1644Q3SXP7 199 aa7.4□□□□□ -1.23
PDGFRA-208ENST00000509490 LINC00305Q7Z4B0 112 aa7.4□□□□□ -1.23
PDGFRA-208ENST00000509490 C11orf42Q8N5U0 333 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms