RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 LILRB2Q8N423 598 aa17.99■□□□□ 0.47
SRPK1-210ENST00000508473 ACY3Q96HD9 319 aa17.99■□□□□ 0.47
SRPK1-210ENST00000508473 CITED4Q96RK1 184 aa17.99■□□□□ 0.47
SRPK1-210ENST00000508473 IFNA4P05014 189 aa17.98■□□□□ 0.47
SRPK1-210ENST00000508473 SLC25A6P12236 298 aa17.98■□□□□ 0.47
SRPK1-210ENST00000508473 TCF24Q7RTU0 167 aa17.98■□□□□ 0.47
SRPK1-210ENST00000508473 GBGT1Q8N5D6 347 aa17.98■□□□□ 0.47
SRPK1-210ENST00000508473 OR1S2Q8NGQ3 325 aa17.98■□□□□ 0.47
SRPK1-210ENST00000508473 NPIPB3Q92617 1050 aa17.98■□□□□ 0.47
SRPK1-210ENST00000508473 PLA2G10O15496 165 aa17.97■□□□□ 0.47
SRPK1-210ENST00000508473 ADAP1O75689 374 aa17.97■□□□□ 0.47
SRPK1-210ENST00000508473 OR4E1P0C645 316 aa17.97■□□□□ 0.47
SRPK1-210ENST00000508473 OR10J1P30954 320 aa17.97■□□□□ 0.47
SRPK1-210ENST00000508473 BMI1P35226 326 aa17.97■□□□□ 0.47
SRPK1-210ENST00000508473 ODF3L2Q3SX64 289 aa17.97■□□□□ 0.47
SRPK1-210ENST00000508473 FAM90A2PQ658T7 463 aa17.97■□□□□ 0.47
SRPK1-210ENST00000508473 FAM110AQ9BQ89 295 aa17.97■□□□□ 0.47
SRPK1-210ENST00000508473 MAGT1Q9H0U3 335 aa17.97■□□□□ 0.47
SRPK1-210ENST00000508473 VSIRQ9H7M9 311 aa17.97■□□□□ 0.47
SRPK1-210ENST00000508473 NPPCP23582 126 aa17.96■□□□□ 0.47
SRPK1-210ENST00000508473 DHRS2Q13268 280 aa17.96■□□□□ 0.47
SRPK1-210ENST00000508473 C4orf46Q504U0 113 aa17.96■□□□□ 0.47
SRPK1-210ENST00000508473 GGTLC1Q9BX51 225 aa17.96■□□□□ 0.47
SRPK1-210ENST00000508473 PAIP2BQ9ULR5 123 aaKnown RBP17.96■□□□□ 0.47
SRPK1-210ENST00000508473 TENM3Q9P273 2699 aa17.96■□□□□ 0.47
SRPK1-210ENST00000508473 LOC102724200A0A096LPH7 203 aaPredicted RBP17.95■□□□□ 0.46
SRPK1-210ENST00000508473 DFFBO76075 338 aa17.95■□□□□ 0.46
SRPK1-210ENST00000508473 CNPY1Q3B7I2 92 aa17.95■□□□□ 0.46
SRPK1-210ENST00000508473 LYG2Q86SG7 212 aa17.95■□□□□ 0.46
SRPK1-210ENST00000508473 WFDC3Q8IUB2 231 aa17.95■□□□□ 0.46
SRPK1-210ENST00000508473 COQ8AQ8NI60 647 aa17.95■□□□□ 0.46
SRPK1-210ENST00000508473 Q8WTZ3 238 aa17.95■□□□□ 0.46
SRPK1-210ENST00000508473 METTL26Q96S19 204 aa17.95■□□□□ 0.46
SRPK1-210ENST00000508473 FAM90A26D6RGX4 464 aa17.94■□□□□ 0.46
SRPK1-210ENST00000508473 LYRM1O43325 122 aa17.94■□□□□ 0.46
SRPK1-210ENST00000508473 MED6O75586 246 aa17.94■□□□□ 0.46
SRPK1-210ENST00000508473 RPL11P62913 178 aaKnown RBP17.94■□□□□ 0.46
SRPK1-210ENST00000508473 MPTX1A8MV57 137 aa17.93■□□□□ 0.46
SRPK1-210ENST00000508473 YPEL3P61236 119 aaPredicted RBP17.93■□□□□ 0.46
SRPK1-210ENST00000508473 A6NHS1 94 aa17.92■□□□□ 0.46
SRPK1-210ENST00000508473 WRBO00258 174 aa17.92■□□□□ 0.46
SRPK1-210ENST00000508473 SYNGR2O43760 224 aa17.92■□□□□ 0.46
SRPK1-210ENST00000508473 ATP5IP56385 69 aaPredicted RBP17.92■□□□□ 0.46
SRPK1-210ENST00000508473 APRG1Q8IVJ8 170 aa17.92■□□□□ 0.46
SRPK1-210ENST00000508473 MUC7Q8TAX7 377 aa17.92■□□□□ 0.46
SRPK1-210ENST00000508473 TMEM231Q9H6L2 316 aa17.92■□□□□ 0.46
SRPK1-210ENST00000508473 A0A1W2PS18 150 aa17.91■□□□□ 0.46
SRPK1-210ENST00000508473 CRYBB3P26998 211 aa17.91■□□□□ 0.46
SRPK1-210ENST00000508473 RAB11AP62491 216 aa17.91■□□□□ 0.46
SRPK1-210ENST00000508473 PAFAH1B2P68402 229 aa17.91■□□□□ 0.46
SRPK1-210ENST00000508473 ZNF124Q15973 351 aa17.91■□□□□ 0.46
SRPK1-210ENST00000508473 SLC35E1Q96K37 410 aa17.91■□□□□ 0.46
SRPK1-210ENST00000508473 CCDC32Q9BV29 185 aa17.91■□□□□ 0.46
SRPK1-210ENST00000508473 C20orf85Q9H1P6 137 aa17.91■□□□□ 0.46
SRPK1-210ENST00000508473 MS4A6AQ9H2W1 248 aa17.91■□□□□ 0.46
SRPK1-210ENST00000508473 EDA2RQ9HAV5 297 aa17.91■□□□□ 0.46
SRPK1-210ENST00000508473 DNASE2O00115 360 aaPredicted RBP17.9■□□□□ 0.46
SRPK1-210ENST00000508473 IFNA21P01568 189 aa17.9■□□□□ 0.46
SRPK1-210ENST00000508473 IL4P05112 153 aa17.9■□□□□ 0.46
SRPK1-210ENST00000508473 CD5P06127 495 aa17.9■□□□□ 0.46
SRPK1-210ENST00000508473 RD3LP0DJH9 198 aa17.9■□□□□ 0.46
SRPK1-210ENST00000508473 GPX4P36969 197 aaPredicted RBP17.9■□□□□ 0.46
SRPK1-210ENST00000508473 P2RY1P47900 373 aa17.9■□□□□ 0.46
SRPK1-210ENST00000508473 GAMTQ14353 236 aa17.9■□□□□ 0.46
SRPK1-210ENST00000508473 NARS2Q96I59 477 aaKnown RBP17.9■□□□□ 0.46
SRPK1-210ENST00000508473 CIB3Q96Q77 187 aaPredicted RBP17.9■□□□□ 0.46
SRPK1-210ENST00000508473 C3orf84H3BNL1 204 aa17.89■□□□□ 0.45
SRPK1-210ENST00000508473 TOMM40O96008 361 aa17.89■□□□□ 0.45
SRPK1-210ENST00000508473 RPL35AP18077 110 aaKnown RBP17.89■□□□□ 0.45
SRPK1-210ENST00000508473 USF2Q15853 346 aaPredicted RBP17.89■□□□□ 0.45
SRPK1-210ENST00000508473 RABAC1Q9UI14 185 aa17.89■□□□□ 0.45
SRPK1-210ENST00000508473 TRAV6A0A075B6T7 132 aa17.88■□□□□ 0.45
SRPK1-210ENST00000508473 ZFP92A6NM28 416 aa17.88■□□□□ 0.45
SRPK1-210ENST00000508473 H3BP45 60 aa17.88■□□□□ 0.45
SRPK1-210ENST00000508473 TCRBP04435 133 aa17.88■□□□□ 0.45
SRPK1-210ENST00000508473 HNRNPCP07910 306 aaKnown RBP eCLIP17.88■□□□□ 0.454e-6■□□□□ 8.4
SRPK1-210ENST00000508473 PSG1P11464 419 aa17.88■□□□□ 0.45
SRPK1-210ENST00000508473 POLR2GP62487 172 aaKnown RBP eCLIP17.88■□□□□ 0.45
SRPK1-210ENST00000508473 SPANXN5Q5MJ07 72 aa17.88■□□□□ 0.45
SRPK1-210ENST00000508473 MAP6D1Q9H9H5 199 aa17.88■□□□□ 0.45
SRPK1-210ENST00000508473 CMC4P56277 68 aaPredicted RBP17.87■□□□□ 0.45
SRPK1-210ENST00000508473 RPP30P78346 268 aaKnown RBP17.87■□□□□ 0.45
SRPK1-210ENST00000508473 ID3Q02535 119 aa17.87■□□□□ 0.45
SRPK1-210ENST00000508473 LINC00299Q6ZSB3 139 aa17.87■□□□□ 0.45
SRPK1-210ENST00000508473 STXBP6Q8NFX7 210 aa17.87■□□□□ 0.45
SRPK1-210ENST00000508473 S100ZQ8WXG8 99 aa17.87■□□□□ 0.45
SRPK1-210ENST00000508473 GRAMD2BQ96HH9 432 aa17.87■□□□□ 0.45
SRPK1-210ENST00000508473 U3KQE9 123 aa17.87■□□□□ 0.45
SRPK1-210ENST00000508473 IGKV1D-37A0A075B6S9 117 aa17.86■□□□□ 0.45
SRPK1-210ENST00000508473 NKX2-1P43699 371 aaPredicted RBP17.86■□□□□ 0.45
SRPK1-210ENST00000508473 ZNF90Q03938 601 aa17.86■□□□□ 0.45
SRPK1-210ENST00000508473 FAM24BQ8N5W8 94 aa17.86■□□□□ 0.45
SRPK1-210ENST00000508473 OR51G1Q8NGK1 321 aa17.86■□□□□ 0.45
SRPK1-210ENST00000508473 OR4D5Q8NGN0 318 aa17.86■□□□□ 0.45
SRPK1-210ENST00000508473 MITD1Q8WV92 249 aa17.86■□□□□ 0.45
SRPK1-210ENST00000508473 NBEAL2Q6ZNJ1 2754 aa17.86■□□□□ 0.45
SRPK1-210ENST00000508473 LYL1P12980 280 aa17.85■□□□□ 0.45
SRPK1-210ENST00000508473 APOC4P55056 127 aa17.85■□□□□ 0.45
SRPK1-210ENST00000508473 OVOL2Q9BRP0 275 aa17.85■□□□□ 0.45
SRPK1-210ENST00000508473 PBDC1Q9BVG4 233 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms