RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 RHEBQ15382 184 aa0.71□□□□□ -2.3
GYPB-207ENST00000506679 LINC01554Q52M75 96 aa0.71□□□□□ -2.3
GYPB-207ENST00000506679 UNQ6190/PRO20217Q6UXQ8 127 aa0.71□□□□□ -2.3
GYPB-207ENST00000506679 Q6ZQT0 140 aa0.71□□□□□ -2.3
GYPB-207ENST00000506679 C12orf29Q8N999 325 aa0.71□□□□□ -2.3
GYPB-207ENST00000506679 OR5A1Q8NGJ0 315 aa0.71□□□□□ -2.3
GYPB-207ENST00000506679 FAM172AQ8WUF8 416 aa0.71□□□□□ -2.3
GYPB-207ENST00000506679 GPR146Q96CH1 333 aa0.71□□□□□ -2.3
GYPB-207ENST00000506679 PHB2Q99623 299 aa0.71□□□□□ -2.3
GYPB-207ENST00000506679 RNASE7Q9H1E1 156 aaKnown RBP0.71□□□□□ -2.3
GYPB-207ENST00000506679 OSTCQ9NRP0 149 aa0.71□□□□□ -2.3
GYPB-207ENST00000506679 TAS2R4Q9NYW5 299 aa0.71□□□□□ -2.3
GYPB-207ENST00000506679 SOX21Q9Y651 276 aaPredicted RBP0.71□□□□□ -2.3
GYPB-207ENST00000506679 FMN1Q68DA7 1419 aa0.71□□□□□ -2.3
GYPB-207ENST00000506679 HEATR5BQ9P2D3 2071 aa0.71□□□□□ -2.3
GYPB-207ENST00000506679 CAMSAP1Q5T5Y3 1602 aa0.71□□□□□ -2.3
GYPB-207ENST00000506679 DOCK3Q8IZD9 2030 aa0.71□□□□□ -2.3
GYPB-207ENST00000506679 PCF11O94913 1555 aaKnown RBP0.7□□□□□ -2.3
GYPB-207ENST00000506679 SCN10AQ9Y5Y9 1956 aa0.7□□□□□ -2.3
GYPB-207ENST00000506679 MYH7BA7E2Y1 1941 aa0.7□□□□□ -2.3
GYPB-207ENST00000506679 BRWD1Q9NSI6 2320 aa0.7□□□□□ -2.3
GYPB-207ENST00000506679 TRBV19A0A075B6N1 114 aa0.7□□□□□ -2.3
GYPB-207ENST00000506679 IGKV2-40A0A087WW87 121 aaPredicted RBP0.7□□□□□ -2.3
GYPB-207ENST00000506679 TRAV14DV4A0A0A6YYC5 116 aa0.7□□□□□ -2.3
GYPB-207ENST00000506679 IGKV3D-7A0A0C4DH55 119 aa0.7□□□□□ -2.3
GYPB-207ENST00000506679 IGKV3OR2-268A0A0C4DH90 116 aa0.7□□□□□ -2.3
GYPB-207ENST00000506679 FAM159BA6NKW6 160 aa0.7□□□□□ -2.3
GYPB-207ENST00000506679 CYB5BO43169 146 aa0.7□□□□□ -2.3
GYPB-207ENST00000506679 IGKV2D-40P01614 121 aaPredicted RBP0.7□□□□□ -2.3
GYPB-207ENST00000506679 CTSDP07339 412 aaPredicted RBP0.7□□□□□ -2.3
GYPB-207ENST00000506679 MIFP14174 115 aa0.7□□□□□ -2.3
GYPB-207ENST00000506679 CAPZBP47756 277 aa0.7□□□□□ -2.3
GYPB-207ENST00000506679 DEFA1P59665 94 aa0.7□□□□□ -2.3
GYPB-207ENST00000506679 HSPE1P61604 102 aaKnown RBP0.7□□□□□ -2.3
GYPB-207ENST00000506679 BASP1P80723 227 aaKnown RBP0.7□□□□□ -2.3
GYPB-207ENST00000506679 ZNF846Q147U1 533 aa0.7□□□□□ -2.3
GYPB-207ENST00000506679 LCA10Q71F78 164 aa0.7□□□□□ -2.3
GYPB-207ENST00000506679 OR10X1Q8NGY0 326 aa0.7□□□□□ -2.3
GYPB-207ENST00000506679 SLC25A40Q8TBP6 338 aa0.7□□□□□ -2.3
GYPB-207ENST00000506679 ADAT1Q9BUB4 502 aaKnown RBP0.7□□□□□ -2.3
GYPB-207ENST00000506679 IMUPQ9GZP8 106 aa0.7□□□□□ -2.3
GYPB-207ENST00000506679 ARMC1Q9NVT9 282 aa0.7□□□□□ -2.3
GYPB-207ENST00000506679 OPTCQ9UBM4 332 aa0.7□□□□□ -2.3
GYPB-207ENST00000506679 STOML2Q9UJZ1 356 aa0.7□□□□□ -2.3
GYPB-207ENST00000506679 SLC35A3Q9Y2D2 325 aa0.7□□□□□ -2.3
GYPB-207ENST00000506679 FAM32AQ9Y421 112 aaKnown RBP0.7□□□□□ -2.3
GYPB-207ENST00000506679 SYNE2Q8WXH0 6885 aaKnown RBP0.7□□□□□ -2.3
GYPB-207ENST00000506679 HECW1Q76N89 1606 aa0.7□□□□□ -2.3
GYPB-207ENST00000506679 SETD5Q9C0A6 1442 aa0.7□□□□□ -2.3
GYPB-207ENST00000506679 MED1Q15648 1581 aaPredicted RBP0.7□□□□□ -2.3
GYPB-207ENST00000506679 OBSL1O75147 1896 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 TAF1LQ8IZX4 1826 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 IGKV3-7A0A075B6H7 116 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 TRAV4A0A0B4J268 109 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 TMEM212A6NML5 194 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 SULT1B1O43704 296 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 PROSCO94903 275 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 IFNA7P01567 189 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 SMIM17P0DL12 118 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 LYNX1P0DP58 116 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 FKBP2P26885 142 aaKnown RBP0.69□□□□□ -2.3
GYPB-207ENST00000506679 SRP14P37108 136 aaKnown RBP0.69□□□□□ -2.3
GYPB-207ENST00000506679 EIF5AP63241 154 aaKnown RBP0.69□□□□□ -2.3
GYPB-207ENST00000506679 TSNQ15631 228 aaKnown RBP0.69□□□□□ -2.3
GYPB-207ENST00000506679 C10orf55Q5SWW7 151 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 GOLT1AQ6ZVE7 132 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 PXT1Q8NFP0 134 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 OR8D4Q8NGM9 314 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 OR13D1Q8NGV5 346 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 C10orf105Q8TEF2 133 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 CEP19Q96LK0 163 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 YPEL2Q96QA6 119 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 HIST1H2BLQ99880 126 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 RETNLBQ9BQ08 111 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 SLC50A1Q9BRV3 221 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 C9orf16Q9BUW7 83 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 TRABDQ9H4I3 376 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 ENY2Q9NPA8 101 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 IL20Q9NYY1 176 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 HS3ST2Q9Y278 367 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 AHNAK2Q8IVF2 5795 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 MYOFQ9NZM1 2061 aa0.69□□□□□ -2.3
GYPB-207ENST00000506679 MED12LQ86YW9 2145 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 IGKV1D-42A0A075B6H8 117 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 TRGV10A0A0A0MS01 117 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 AIPO00170 330 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 OR2T1O43869 369 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 UBL3O95164 117 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 ASAH2BP0C7U1 165 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 CRYGAP11844 174 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 CYBAP13498 195 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 SPI1P17947 270 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 BRS3P32247 399 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 PIGPP57054 158 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 RHOBP62745 196 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 RHOGP84095 191 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 CDK5R1Q15078 307 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 DHRS4L2Q6PKH6 230 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 MICAL3Q7RTP6 2002 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 TMED4Q7Z7H5 227 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms