RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 DEDD2Q8WXF8 326 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 TESCQ96BS2 214 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 RMI2Q96E14 147 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 SMIM12Q96EX1 92 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 CCDC115Q96NT0 180 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 RBP7Q96R05 134 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 PAIP2Q9BPZ3 127 aaKnown RBP1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 PRSS27Q9BQR3 290 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 ZNF2Q9BSG1 426 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 METTL9Q9H1A3 318 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 CENPHQ9H3R5 247 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 ANGPT4Q9Y264 503 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 TBL2Q9Y4P3 447 aaKnown RBP1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 RYR3Q15413 4870 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 KMT2CQ8NEZ4 4911 aaKnown RBP1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 FREM1Q5H8C1 2179 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 MALRD1Q5VYJ5 2156 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 A0A087WUJ7 227 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 IGHV3-21A0A0B4J1V1 117 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 IGHV3-43A0A0B4J1X8 118 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 IGKV1D-43A0A0B4J1Z2 117 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 IGHV1-69-2A0A0G2JMI3 117 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 DAPL1A0PJW8 107 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 CPSF4LA6NMK7 179 aaKnown RBP1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 F5H5P2 479 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 TMEM250H0YL14 139 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 H7C1C5 153 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 CCRL2O00421 344 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 ISLRO14498 428 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 TPST1O60507 370 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 HPGDSO60760 199 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 SOX14O95416 240 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 PRB2P02812 416 aaPredicted RBP1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 SERPINE1P05121 402 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 TFPTP0C1Z6 253 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 HIST1H1CP16403 213 aaKnown RBP1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 RPL14P50914 215 aaKnown RBP1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 NAA20P61599 178 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 NCALDP61601 193 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 LCN6P62502 163 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 RBX1P62877 108 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 UBA52P62987 128 aaKnown RBP1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 PRB3Q04118 309 aaPredicted RBP1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 GNA13Q14344 377 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 DNAL1Q4LDG9 190 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 TMEM69Q5SWH9 247 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 KPRPQ5T749 579 aaPredicted RBP1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 ZFAND6Q6FIF0 208 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 ELP2Q6IA86 826 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 BRD3OSQ6XYD6 125 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 SSX8Q7RTT4 187 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 MSRB3Q8IXL7 192 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 C20orf196Q8IYI0 205 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 RIBC1Q8N443 379 aaPredicted RBP1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 LRRC18Q8N456 261 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 DEFB108BQ8NET1 73 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 SLC30A7Q8NEW0 376 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 OR8J2Q8NGG1 315 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 OR4D11Q8NGI4 311 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 PFN4Q8NHR9 129 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 MFSD8Q8NHS3 518 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 STOML3Q8TAV4 291 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 ZNF418Q8TF45 676 aaPredicted RBP1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 OR52B2Q96RD2 323 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 OR52E6Q96RD3 313 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 SEC22CQ9BRL7 303 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 CHST5Q9GZS9 411 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 VSIRQ9H7M9 311 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 TPT1P8Q9HAU6 139 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 SPANXB1Q9NS25 103 aaPredicted RBP1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 TAAR3PQ9P1P4 343 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 NAGKQ9UJ70 344 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 TRAPPC1Q9Y5R8 145 aa1.84□□□□□ -2.11
TRAPPC11-205ENST00000506426 VWFP04275 2813 aa1.84□□□□□ -2.12
TRAPPC11-205ENST00000506426 HEATR5AQ86XA9 2040 aa1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 TRAV36DV7A0A075B6V5 113 aa1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 A0A096LPI6 279 aa1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 C5orf49A4QMS7 147 aa1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 C5orf58C9J3I9 102 aa1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 CLDN25C9JDP6 229 aa1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 TRAPPC2LH3BP13 241 aa1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 FAAHO00519 579 aa1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 ATP8B1O43520 1251 aa1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 UBL3O95164 117 aa1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 KRT75O95678 551 aa1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 PFN1P07737 140 aaKnown RBP1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 S100A2P29034 98 aa1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 GLRXP35754 106 aa1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 INPP1P49441 399 aa1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 MP68P56378 58 aa1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 KLF3P57682 345 aaPredicted RBP1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 RAB2AP61019 212 aa1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 BAMBIQ13145 260 aa1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 LY6EQ16553 131 aa1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 TBC1D28Q2M2D7 210 aa1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 PABPC1L2AQ5JQF8 200 aa1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 FAM201AQ5SY85 155 aa1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 DRAM2Q6UX65 266 aa1.83□□□□□ -2.12
TRAPPC11-205ENST00000506426 PDZD9Q8IXQ8 264 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms