RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 KCNIP4Q6PIL6 250 aa17.91■□□□□ 0.46
PCDH1-204ENST00000503492 TRGV9Q99603 122 aa17.91■□□□□ 0.46
PCDH1-204ENST00000503492 IFITM10A6NMD0 228 aa17.9■□□□□ 0.46
PCDH1-204ENST00000503492 PYYP10082 97 aa17.9■□□□□ 0.46
PCDH1-204ENST00000503492 CDX1P47902 265 aaPredicted RBP17.9■□□□□ 0.46
PCDH1-204ENST00000503492 C1orf122Q6ZSJ8 110 aa17.9■□□□□ 0.46
PCDH1-204ENST00000503492 VMO1Q7Z5L0 202 aa17.9■□□□□ 0.46
PCDH1-204ENST00000503492 EAF1Q96JC9 268 aaPredicted RBP17.9■□□□□ 0.46
PCDH1-204ENST00000503492 NBR2O15453 112 aa17.9■□□□□ 0.46
PCDH1-204ENST00000503492 PCP4L1A6NKN8 68 aa17.89■□□□□ 0.45
PCDH1-204ENST00000503492 C22orf15Q8WYQ4 148 aa17.89■□□□□ 0.45
PCDH1-204ENST00000503492 LY96Q9Y6Y9 160 aa17.89■□□□□ 0.45
PCDH1-204ENST00000503492 HELTA6NFD8 242 aa17.89■□□□□ 0.45
PCDH1-204ENST00000503492 CNIH1O95406 144 aa17.89■□□□□ 0.45
PCDH1-204ENST00000503492 LINC00305Q7Z4B0 112 aa17.89■□□□□ 0.45
PCDH1-204ENST00000503492 NPBQ8NG41 125 aa17.89■□□□□ 0.45
PCDH1-204ENST00000503492 OR10G8Q8NGN5 311 aa17.89■□□□□ 0.45
PCDH1-204ENST00000503492 IMMP2LQ96T52 175 aa17.89■□□□□ 0.45
PCDH1-204ENST00000503492 PAXXQ9BUH6 204 aa17.89■□□□□ 0.45
PCDH1-204ENST00000503492 GSX1Q9H4S2 264 aaPredicted RBP17.89■□□□□ 0.45
PCDH1-204ENST00000503492 NDUFA3O95167 84 aa17.88■□□□□ 0.45
PCDH1-204ENST00000503492 TYMSP04818 313 aa17.88■□□□□ 0.45
PCDH1-204ENST00000503492 ORM2P19652 201 aa17.88■□□□□ 0.45
PCDH1-204ENST00000503492 EFNA4P52798 201 aa17.88■□□□□ 0.45
PCDH1-204ENST00000503492 SSX2Q16385 188 aa17.88■□□□□ 0.45
PCDH1-204ENST00000503492 KIR3DL3Q8N743 410 aa17.88■□□□□ 0.45
PCDH1-204ENST00000503492 TCEAL7Q9BRU2 100 aa17.88■□□□□ 0.45
PCDH1-204ENST00000503492 TACC2O95359 2948 aa17.88■□□□□ 0.45
PCDH1-204ENST00000503492 SMIM6P0DI80 62 aa17.88■□□□□ 0.45
PCDH1-204ENST00000503492 GFI1BQ5VTD9 330 aa17.88■□□□□ 0.45
PCDH1-204ENST00000503492 DYNAPQ8N1N2 210 aa17.88■□□□□ 0.45
PCDH1-204ENST00000503492 WNT10AQ9GZT5 417 aa17.88■□□□□ 0.45
PCDH1-204ENST00000503492 OR51M1Q9H341 326 aa17.88■□□□□ 0.45
PCDH1-204ENST00000503492 ELOA3CA0A087WX78 387 aaPredicted RBP17.87■□□□□ 0.45
PCDH1-204ENST00000503492 HOXB4P17483 251 aaPredicted RBP17.87■□□□□ 0.45
PCDH1-204ENST00000503492 FOXL1Q12952 345 aa17.87■□□□□ 0.45
PCDH1-204ENST00000503492 CENPWQ5EE01 88 aa17.87■□□□□ 0.45
PCDH1-204ENST00000503492 OR1B1Q8NGR6 318 aa17.87■□□□□ 0.45
PCDH1-204ENST00000503492 SRSF8Q9BRL6 282 aaKnown RBP17.87■□□□□ 0.45
PCDH1-204ENST00000503492 PIEZO1Q92508 2521 aa17.87■□□□□ 0.45
PCDH1-204ENST00000503492 LCN2P80188 198 aa17.87■□□□□ 0.45
PCDH1-204ENST00000503492 SGMS2Q8NHU3 365 aa17.87■□□□□ 0.45
PCDH1-204ENST00000503492 I3L2K1 104 aa17.86■□□□□ 0.45
PCDH1-204ENST00000503492 S100A9P06702 114 aaKnown RBP17.86■□□□□ 0.45
PCDH1-204ENST00000503492 GNG4P50150 75 aa17.86■□□□□ 0.45
PCDH1-204ENST00000503492 HES1Q14469 280 aa17.86■□□□□ 0.45
PCDH1-204ENST00000503492 FXYD5Q96DB9 178 aa17.86■□□□□ 0.45
PCDH1-204ENST00000503492 PKD1L2Q7Z442 2459 aa17.86■□□□□ 0.45
PCDH1-204ENST00000503492 PERPQ96FX8 193 aa17.85■□□□□ 0.45
PCDH1-204ENST00000503492 SIRPDQ9H106 197 aa17.85■□□□□ 0.45
PCDH1-204ENST00000503492 OR5I1Q13606 314 aa17.84■□□□□ 0.45
PCDH1-204ENST00000503492 FAM103A1Q9BTL3 118 aaKnown RBP17.84■□□□□ 0.45
PCDH1-204ENST00000503492 FXYD3Q14802 87 aa17.84■□□□□ 0.45
PCDH1-204ENST00000503492 C5orf64Q2M2E5 130 aa17.84■□□□□ 0.45
PCDH1-204ENST00000503492 ACTL10Q5JWF8 245 aa17.84■□□□□ 0.45
PCDH1-204ENST00000503492 HIST3H2BBQ8N257 126 aa17.84■□□□□ 0.45
PCDH1-204ENST00000503492 A0A0U1RQK1 487 aa17.83■□□□□ 0.45
PCDH1-204ENST00000503492 ZNF320A2RRD8 509 aa17.83■□□□□ 0.45
PCDH1-204ENST00000503492 SLC17A3O00476 420 aa17.83■□□□□ 0.45
PCDH1-204ENST00000503492 SNRPCP09234 159 aaKnown RBP17.83■□□□□ 0.45
PCDH1-204ENST00000503492 IGLC1P0CG04 106 aa17.83■□□□□ 0.45
PCDH1-204ENST00000503492 ABCA1O95477 2261 aa17.83■□□□□ 0.45
PCDH1-204ENST00000503492 CACNA1AO00555 2505 aa17.83■□□□□ 0.45
PCDH1-204ENST00000503492 PDZD11Q5EBL8 140 aa17.83■□□□□ 0.44
PCDH1-204ENST00000503492 GPR61Q9BZJ8 451 aa17.83■□□□□ 0.44
PCDH1-204ENST00000503492 HYPMO75409 117 aa17.82■□□□□ 0.44
PCDH1-204ENST00000503492 PLP1P60201 277 aa17.82■□□□□ 0.44
PCDH1-204ENST00000503492 CCDC144NLQ6NUI1 221 aa17.82■□□□□ 0.44
PCDH1-204ENST00000503492 ZNF329Q86UD4 541 aa17.82■□□□□ 0.44
PCDH1-204ENST00000503492 BPESC1Q9GZL8 116 aa17.82■□□□□ 0.44
PCDH1-204ENST00000503492 MINOS1Q5TGZ0 78 aa17.82■□□□□ 0.44
PCDH1-204ENST00000503492 IGF2BP2-AS1Q96M15 143 aa17.82■□□□□ 0.44
PCDH1-204ENST00000503492 MINOS1-NBL1R4GNA1 71 aa17.82■□□□□ 0.44
PCDH1-204ENST00000503492 IGHV2-70DA0A0C4DH43 119 aa17.81■□□□□ 0.44
PCDH1-204ENST00000503492 K7EIM0 57 aa17.81■□□□□ 0.44
PCDH1-204ENST00000503492 IGLV2-8P01709 118 aa17.81■□□□□ 0.44
PCDH1-204ENST00000503492 GAR1Q9NY12 217 aaKnown RBP17.81■□□□□ 0.44
PCDH1-204ENST00000503492 IL36BQ9NZH7 164 aa17.81■□□□□ 0.44
PCDH1-204ENST00000503492 MED13LQ71F56 2210 aa17.81■□□□□ 0.44
PCDH1-204ENST00000503492 WNK2Q9Y3S1 2297 aa17.81■□□□□ 0.44
PCDH1-204ENST00000503492 OOSP1A8MZH6 123 aa17.81■□□□□ 0.44
PCDH1-204ENST00000503492 PSG1P11464 419 aa17.81■□□□□ 0.44
PCDH1-204ENST00000503492 ERVFC1-1P60608 527 aa17.81■□□□□ 0.44
PCDH1-204ENST00000503492 RPL15P61313 204 aaKnown RBP17.81■□□□□ 0.44
PCDH1-204ENST00000503492 LMO4P61968 165 aa17.81■□□□□ 0.44
PCDH1-204ENST00000503492 LINC00479Q96M42 142 aa17.81■□□□□ 0.44
PCDH1-204ENST00000503492 PITPNC1Q9UKF7 332 aa17.81■□□□□ 0.44
PCDH1-204ENST00000503492 V9GYV3 84 aa17.81■□□□□ 0.44
PCDH1-204ENST00000503492 OVOL3O00110 214 aa17.8■□□□□ 0.44
PCDH1-204ENST00000503492 TIGITQ495A1 244 aa17.8■□□□□ 0.44
PCDH1-204ENST00000503492 Q8N6K4 173 aa17.8■□□□□ 0.44
PCDH1-204ENST00000503492 BTF3L4Q96K17 158 aa17.8■□□□□ 0.44
PCDH1-204ENST00000503492 STXBP6Q8NFX7 210 aa17.8■□□□□ 0.44
PCDH1-204ENST00000503492 MYCNOSP40205 109 aa17.79■□□□□ 0.44
PCDH1-204ENST00000503492 TBX15Q96SF7 602 aa17.79■□□□□ 0.44
PCDH1-204ENST00000503492 TOX4O94842 621 aa17.79■□□□□ 0.44
PCDH1-204ENST00000503492 GCGP01275 180 aa17.79■□□□□ 0.44
PCDH1-204ENST00000503492 IGKV1-17P01599 117 aa17.79■□□□□ 0.44
PCDH1-204ENST00000503492 S100A2P29034 98 aa17.79■□□□□ 0.44
PCDH1-204ENST00000503492 CX3CL1P78423 397 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms