RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 MARCH3Q86UD3 253 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 C10orf111Q8N326 155 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 LRRC18Q8N456 261 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 TMEM75Q8N9X5 138 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF439Q8NDP4 499 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 NPBQ8NG41 125 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 OR5J2Q8NH18 312 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 LHFPL5Q8TAF8 219 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 DCUN1D4Q92564 292 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 PTX4Q96A99 478 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 C12orf43Q96C57 262 aaKnown RBP3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 ISOC1Q96CN7 298 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 IMMP1LQ96LU5 166 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 NRIP2Q9BQI9 281 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF649Q9BS31 505 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 OR52D1Q9H346 318 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 CA10Q9NS85 328 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 CKLFQ9UBR5 152 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 BOKQ9UMX3 212 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 MOB4Q9Y3A3 225 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZFHX3Q15911 3703 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 IGLV3-32A0A0A0MS00 114 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 IGHV1-45A0A0A0MS14 117 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 TRDV1A0A1B0GX56 115 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 MAP1LC3B2A6NCE7 125 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 CLDN25C9JDP6 229 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 J3QLW9 94 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 K7EM74 188 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 LGALS9O00182 355 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 RGS5O15539 181 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 COX7A2P2O60397 106 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 SERF1AO75920 110 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 OR2J2O76002 312 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 IGHMP01871 453 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 CD2P06729 351 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 OR10J4P0C629 311 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF19P17023 458 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 ORM2P19652 201 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 SDC2P34741 201 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 SRP9P49458 86 aaKnown RBP3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 PCBD1P61457 104 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 GNG5P63218 68 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 HOXC5Q00444 222 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 IL15RAQ13261 267 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF239Q16600 458 aaKnown RBP3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 TMEM128Q5BJH2 165 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 C1orf140Q5VVS0 124 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 SAMD13Q5VXD3 122 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 GOLT1AQ6ZVE7 132 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 SLC25A42Q86VD7 318 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 OSR2Q8N2R0 312 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 YIPF7Q8N8F6 280 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 APCDD1LQ8NCL9 501 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 OR8B12Q8NGG6 310 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 RNASE11Q8TAA1 199 aaKnown RBP3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 THEM6Q8WUY1 208 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 S100A16Q96FQ6 103 aaKnown RBP3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 PFDN5Q99471 154 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 SEC22CQ9BRL7 303 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 GGTLC1Q9BX51 225 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 MAP1LC3BQ9GZQ8 125 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 HES4Q9HCC6 221 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 PXMP4Q9Y6I8 212 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 YLPM1P49750 1951 aaKnown RBP3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 HEATR5BQ9P2D3 2071 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 PDZD2O15018 2839 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 MYO9AB2RTY4 2548 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 MTORP42345 2549 aa3.1□□□□□ -1.91
HMGB1P21-201ENST00000502313 POLQO75417 2590 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 ANK3Q12955 4377 aaKnown RBP3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 LOC102724200A0A096LPH7 203 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 IGHV3-74A0A0B4J1X5 117 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 TRAV1-2A0A0B4J238 106 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 TRAV26-2A0A0B4J265 109 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 A0A0X1KG70 313 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 NDUFAF8A1L188 74 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 C4orf51C9J302 202 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 K7EPK0 472 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 TCF21O43680 179 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 PFDN1O60925 122 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 ASAH2BP0C7U1 165 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 CFC1BP0CG36 223 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 RPS20P60866 119 aaKnown RBP3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 SNRPD2P62316 118 aaKnown RBP3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 BTN1A1Q13410 526 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 MPPED2Q15777 294 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 TMEM183BQ1AE95 376 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF181Q2M3W8 571 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 IAH1Q2TAA2 248 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF791Q3KP31 576 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 TMEM244Q5VVB8 128 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 XAF1Q6GPH4 301 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 IGFL3Q6UXB1 125 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF429Q86V71 674 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 TMEM183AQ8IXX5 376 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 Q8N377 158 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 LY6G5BQ8NDX9 201 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 OR11G2Q8NGC1 345 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 OR4D11Q8NGI4 311 aa3.09□□□□□ -1.91
HMGB1P21-201ENST00000502313 OR5D14Q8NGL3 314 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms